| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078177
Identifier: 170078177
GI number: 170078177
Start: 1652685
End: 1653167
Strand: Direct
Name: 170078177
Synonym: SYNPCC7002_A1568
Alternate gene names: NA
Gene position: 1652685-1653167 (Clockwise)
Preceding gene: 170078176
Following gene: 170078182
Centisome position: 54.94
GC content: 49.48
Gene sequence:
>483_bases ATGCTTTTACCCCGTCGCTTCCAAGATTATTTGCTGGGCAGTTGCCTTACCCTCAGCGCCCTGGGCTTGGGGCTAGCGCC CCAATTAACCCTCAAACCGGAAATTCTTGGCTGGCAAAATCAGGCGATCGCCCAACAACCGAGCACCGCAGACATTAATC GCTATGCCGAAGCCTATCTGGCGATCTACGGCAATAACAGCATGGATAATCTCTTGTTGGAAGTCGAAAATCTCATTGGC CGCAAACCGGACTGGGAAATTCGCTGCGATCAGCCCCAGAGTATTAACCGTCTCAATAACCGTGCCGCCATTGGGAAAGT GCGTAACTACTGCAACAATGTTTTGCCCAACCTCATTGACGACATTATGCCCCGCAGCACCTTTAATCGCATTAGTAATC AGTTGCCCAATAATCCGACTCTCCAGGAACAAATTCAAGACGCCATGTTCGATATTCTCAAACAAAAACAAGGCGGCCGT TAA
Upstream 100 bases:
>100_bases AAAAAGTTGCCCCCTGGAACTTCCCTCCCTAAAACCTATTCTTTAATATTAAATACGTTTAAAATTTGCCATCGCTGATT TTTATTCCCCATCGGTCATT
Downstream 100 bases:
>100_bases CTAACTCGTCCGCATATATCGAACAAAATTCCCTTCCCCCAGCACCATGGGGGATTTTTTTGCCCATAGGTACAACACAC AAAAGGCGATCGCCAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLLPRRFQDYLLGSCLTLSALGLGLAPQLTLKPEILGWQNQAIAQQPSTADINRYAEAYLAIYGNNSMDNLLLEVENLIG RKPDWEIRCDQPQSINRLNNRAAIGKVRNYCNNVLPNLIDDIMPRSTFNRISNQLPNNPTLQEQIQDAMFDILKQKQGGR
Sequences:
>Translated_160_residues MLLPRRFQDYLLGSCLTLSALGLGLAPQLTLKPEILGWQNQAIAQQPSTADINRYAEAYLAIYGNNSMDNLLLEVENLIG RKPDWEIRCDQPQSINRLNNRAAIGKVRNYCNNVLPNLIDDIMPRSTFNRISNQLPNNPTLQEQIQDAMFDILKQKQGGR >Mature_160_residues MLLPRRFQDYLLGSCLTLSALGLGLAPQLTLKPEILGWQNQAIAQQPSTADINRYAEAYLAIYGNNSMDNLLLEVENLIG RKPDWEIRCDQPQSINRLNNRAAIGKVRNYCNNVLPNLIDDIMPRSTFNRISNQLPNNPTLQEQIQDAMFDILKQKQGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18138; Mature: 18138
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPRRFQDYLLGSCLTLSALGLGLAPQLTLKPEILGWQNQAIAQQPSTADINRYAEAYL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHH AIYGNNSMDNLLLEVENLIGRKPDWEIRCDQPQSINRLNNRAAIGKVRNYCNNVLPNLID HHCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIMPRSTFNRISNQLPNNPTLQEQIQDAMFDILKQKQGGR HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLPRRFQDYLLGSCLTLSALGLGLAPQLTLKPEILGWQNQAIAQQPSTADINRYAEAYL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHH AIYGNNSMDNLLLEVENLIGRKPDWEIRCDQPQSINRLNNRAAIGKVRNYCNNVLPNLID HHCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIMPRSTFNRISNQLPNNPTLQEQIQDAMFDILKQKQGGR HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA