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The map label for this gene is holA [H]

Identifier: 170078176

GI number: 170078176

Start: 1651584

End: 1652564

Strand: Direct

Name: holA [H]

Synonym: SYNPCC7002_A1567

Alternate gene names: 170078176

Gene position: 1651584-1652564 (Clockwise)

Preceding gene: 170078173

Following gene: 170078177

Centisome position: 54.91

GC content: 48.42

Gene sequence:

>981_bases
ATGGCGGTGTATTTTTTCTGGGGAGAGGATGATTTTGCGATCGCCCAAGCGGTGGATCAGATTAAGCAATCGGTTTTAGA
TCCAGCTTGGCTATCGTTTAATTTTCAGACCTACGACGGCAGTAAAGAGGAAAGTATTATTGATGCGCTGGATGAGGTGA
TGACGCCGCCCTTTGGCATGGGAGGACGGTTAATTTGGCTGAATGAAGCGACGTTGTGCCAATCTTGCTCGGATAGTCTT
TTGCAGGAATTGCACCGGACATTACCCGTGATTCCCGAAAGTTCACACCTGTTAATGACGAGCCGTAAAAAACCAGATAA
GCGGCTAAAATCGACAAAATTTATCCAGGAACACGCGAAAGTATGGGAGTTTTCGCCGATTCCCCCGTGGCAGACGGAAG
CCCTAGCAGATCGCGTTAAAGCAACAGCGCGGGAATTGGGGGTGAATTTAGATCGACCAGCAACGGAATTGCTCGGTGAA
GCGGTGGGCAATGATACGCGACGGCTCTGGAATGAGTTAGAAAAGCTCAAAATTTATCAGGGGAGCCGGACGCAACCGTT
AACAAAAGTAGAAATTCAGCAACTGGTGGCAGCAACGAACCAAAATAGTTTGCAACTCTGTGAGGCGATCCGGGAAGGCA
ATGGTGGTTTAGCGATTCAATTGGTGGGGGAACTGTTGGCGCAAAATGAGCCTGCCCTGCGGATTGTGGCGACGTTGATC
GGTCAATTCCGGATGTGGACAATTATTAAGGTAATGATCGAAGCTGGGGAACGGGACGATCAGGCGATCGCCAAACTAGC
AGATCTCAAGAATCCCAAACGATTATATTTTCTGAAAAAAGAAATTTCCCGGTTGCGGGGTCAGCAACTGCTAAAAACCC
TACCGATTTTGTTAGAACTCGAAGCCGGACTGAAACAAGGGGCGATCGCCGAGGAAATTCTCCCGACTAAAATTCTCGAA
CTCTGTCAGCATTTCCGCTAA

Upstream 100 bases:

>100_bases
ATGAAATTATCGTTGCGCTGTGTTCTGGGCATAATGGTTACGTTGCGAGGGATGCTCTATTTACTTTACCTTGATTTGTT
TGTGATTTTAGCGGATTGCG

Downstream 100 bases:

>100_bases
ACCCTTGCAACCATGGCAGAAAAAAGTTGCCCCCTGGAACTTCCCTCCCTAAAACCTATTCTTTAATATTAAATACGTTT
AAAATTTGCCATCGCTGATT

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAVYFFWGEDDFAIAQAVDQIKQSVLDPAWLSFNFQTYDGSKEESIIDALDEVMTPPFGMGGRLIWLNEATLCQSCSDSL
LQELHRTLPVIPESSHLLMTSRKKPDKRLKSTKFIQEHAKVWEFSPIPPWQTEALADRVKATARELGVNLDRPATELLGE
AVGNDTRRLWNELEKLKIYQGSRTQPLTKVEIQQLVAATNQNSLQLCEAIREGNGGLAIQLVGELLAQNEPALRIVATLI
GQFRMWTIIKVMIEAGERDDQAIAKLADLKNPKRLYFLKKEISRLRGQQLLKTLPILLELEAGLKQGAIAEEILPTKILE
LCQHFR

Sequences:

>Translated_326_residues
MAVYFFWGEDDFAIAQAVDQIKQSVLDPAWLSFNFQTYDGSKEESIIDALDEVMTPPFGMGGRLIWLNEATLCQSCSDSL
LQELHRTLPVIPESSHLLMTSRKKPDKRLKSTKFIQEHAKVWEFSPIPPWQTEALADRVKATARELGVNLDRPATELLGE
AVGNDTRRLWNELEKLKIYQGSRTQPLTKVEIQQLVAATNQNSLQLCEAIREGNGGLAIQLVGELLAQNEPALRIVATLI
GQFRMWTIIKVMIEAGERDDQAIAKLADLKNPKRLYFLKKEISRLRGQQLLKTLPILLELEAGLKQGAIAEEILPTKILE
LCQHFR
>Mature_325_residues
AVYFFWGEDDFAIAQAVDQIKQSVLDPAWLSFNFQTYDGSKEESIIDALDEVMTPPFGMGGRLIWLNEATLCQSCSDSLL
QELHRTLPVIPESSHLLMTSRKKPDKRLKSTKFIQEHAKVWEFSPIPPWQTEALADRVKATARELGVNLDRPATELLGEA
VGNDTRRLWNELEKLKIYQGSRTQPLTKVEIQQLVAATNQNSLQLCEAIREGNGGLAIQLVGELLAQNEPALRIVATLIG
QFRMWTIIKVMIEAGERDDQAIAKLADLKNPKRLYFLKKEISRLRGQQLLKTLPILLELEAGLKQGAIAEEILPTKILEL
CQHFR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 36841; Mature: 36710

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYFFWGEDDFAIAQAVDQIKQSVLDPAWLSFNFQTYDGSKEESIIDALDEVMTPPFGM
CEEEEEECCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC
GGRLIWLNEATLCQSCSDSLLQELHRTLPVIPESSHLLMTSRKKPDKRLKSTKFIQEHAK
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
VWEFSPIPPWQTEALADRVKATARELGVNLDRPATELLGEAVGNDTRRLWNELEKLKIYQ
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GSRTQPLTKVEIQQLVAATNQNSLQLCEAIREGNGGLAIQLVGELLAQNEPALRIVATLI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
GQFRMWTIIKVMIEAGERDDQAIAKLADLKNPKRLYFLKKEISRLRGQQLLKTLPILLEL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGLKQGAIAEEILPTKILELCQHFR
HHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVYFFWGEDDFAIAQAVDQIKQSVLDPAWLSFNFQTYDGSKEESIIDALDEVMTPPFGM
EEEEEECCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC
GGRLIWLNEATLCQSCSDSLLQELHRTLPVIPESSHLLMTSRKKPDKRLKSTKFIQEHAK
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
VWEFSPIPPWQTEALADRVKATARELGVNLDRPATELLGEAVGNDTRRLWNELEKLKIYQ
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GSRTQPLTKVEIQQLVAATNQNSLQLCEAIREGNGGLAIQLVGELLAQNEPALRIVATLI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
GQFRMWTIIKVMIEAGERDDQAIAKLADLKNPKRLYFLKKEISRLRGQQLLKTLPILLEL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGLKQGAIAEEILPTKILELCQHFR
HHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]