| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078145
Identifier: 170078145
GI number: 170078145
Start: 1620414
End: 1621079
Strand: Reverse
Name: 170078145
Synonym: SYNPCC7002_A1536
Alternate gene names: NA
Gene position: 1621079-1620414 (Counterclockwise)
Preceding gene: 170078147
Following gene: 170078144
Centisome position: 53.89
GC content: 54.2
Gene sequence:
>666_bases GTGCAGACTCCCCCCAAACCGCCCCGCAAACTTTTTGAAGACATCTACGCCTTTGCCCCTAATCGAGAAACCCTCGGTGG CACAGCCTACTTTATCGCAAAAGCCGGTGGTGGTCTGTTGGTTGATTGTCCCCCTTGGCACCCAGAAACCCTCAACTTTT TGCAGGCCCAGGGCGGCGTCAAAACCCTCTACATCACCCAGCGGGCCGCCATCAGTAACCAAGTCGCGAAAATTCAACAG GCCCTCGGTTGTGCGATTGTGATCCAAGAGCAAGAAGCCTACCTGATACCAGAGGCTGACGTGACGCCCTTTCGGGATGA TTGGCAGGATGGTGATTTTCGCGGCATTTGGACACCCGGATTTTCCCCTGGTGCTTCCTGTCTCTATTATGGCCAATGGG GAGGCTGTCTGTTCACGGGGCGGCATCTCCTCCCCAACCAAAAGGGTGAAATTCTCGCCCTGCGCACCGCCAAAACTTTC CACTGGGGCCGCCAACTCAAAGGCATCGAAAAGTTAATCGAAATCTTTGAAAATCAGCCTTTGAAATATTTGCTGCCCGC TGCGAATACGGGTTTTCTCCGGGGGACAGGTTATCTAACAGGGGCCTACCCCAAATTACAACAGGCGATCGCCTTGTCCC AGGCCCAACCCCTTGTCCATCTCTAA
Upstream 100 bases:
>100_bases TTGTGGCGATCGCCCCTAGAGAGAAAATTGTCGAAACCTCACCCCAATGCAACAATGGTAGCGACTGTTTAACATTTCAA CATGAGTAGGGACTCCCCCC
Downstream 100 bases:
>100_bases AGCGGCCGATCTTAGTGAAATCGACCAAGGGGCGATCGCCCTCTGCTGGTGGCTCCCATCTCAGGCAATGCGACTATATA ATAAAGGCTATGTGGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQTPPKPPRKLFEDIYAFAPNRETLGGTAYFIAKAGGGLLVDCPPWHPETLNFLQAQGGVKTLYITQRAAISNQVAKIQQ ALGCAIVIQEQEAYLIPEADVTPFRDDWQDGDFRGIWTPGFSPGASCLYYGQWGGCLFTGRHLLPNQKGEILALRTAKTF HWGRQLKGIEKLIEIFENQPLKYLLPAANTGFLRGTGYLTGAYPKLQQAIALSQAQPLVHL
Sequences:
>Translated_221_residues MQTPPKPPRKLFEDIYAFAPNRETLGGTAYFIAKAGGGLLVDCPPWHPETLNFLQAQGGVKTLYITQRAAISNQVAKIQQ ALGCAIVIQEQEAYLIPEADVTPFRDDWQDGDFRGIWTPGFSPGASCLYYGQWGGCLFTGRHLLPNQKGEILALRTAKTF HWGRQLKGIEKLIEIFENQPLKYLLPAANTGFLRGTGYLTGAYPKLQQAIALSQAQPLVHL >Mature_221_residues MQTPPKPPRKLFEDIYAFAPNRETLGGTAYFIAKAGGGLLVDCPPWHPETLNFLQAQGGVKTLYITQRAAISNQVAKIQQ ALGCAIVIQEQEAYLIPEADVTPFRDDWQDGDFRGIWTPGFSPGASCLYYGQWGGCLFTGRHLLPNQKGEILALRTAKTF HWGRQLKGIEKLIEIFENQPLKYLLPAANTGFLRGTGYLTGAYPKLQQAIALSQAQPLVHL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24444; Mature: 24444
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPPKPPRKLFEDIYAFAPNRETLGGTAYFIAKAGGGLLVDCPPWHPETLNFLQAQGGV CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHCCCE KTLYITQRAAISNQVAKIQQALGCAIVIQEQEAYLIPEADVTPFRDDWQDGDFRGIWTPG EEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCC FSPGASCLYYGQWGGCLFTGRHLLPNQKGEILALRTAKTFHWGRQLKGIEKLIEIFENQP CCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC LKYLLPAANTGFLRGTGYLTGAYPKLQQAIALSQAQPLVHL EEEEECCCCCCEEEECCEEECCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQTPPKPPRKLFEDIYAFAPNRETLGGTAYFIAKAGGGLLVDCPPWHPETLNFLQAQGGV CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHCCCE KTLYITQRAAISNQVAKIQQALGCAIVIQEQEAYLIPEADVTPFRDDWQDGDFRGIWTPG EEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCC FSPGASCLYYGQWGGCLFTGRHLLPNQKGEILALRTAKTFHWGRQLKGIEKLIEIFENQP CCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC LKYLLPAANTGFLRGTGYLTGAYPKLQQAIALSQAQPLVHL EEEEECCCCCCEEEECCEEECCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA