| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078116
Identifier: 170078116
GI number: 170078116
Start: 1592954
End: 1593787
Strand: Direct
Name: 170078116
Synonym: SYNPCC7002_A1507
Alternate gene names: NA
Gene position: 1592954-1593787 (Clockwise)
Preceding gene: 170078115
Following gene: 170078117
Centisome position: 52.96
GC content: 37.05
Gene sequence:
>834_bases ATGAAAGATATTAGATACATAATTAAACGGACAAGCCATTTTTTAAAGTATGGCTTACATCATTCTCTTCTTTGGGCACG TCCTAAACATCGAAATTGGGGTGACGATCTCAATCCTTGGCTTTTTGAAAAACTCACAGGAAAGAAGGCTGTTTACTGTC CACATAAATCATGCCGACGGTTTCTAATGGCAGGAAGTATTTTAACTGGAGCAGGTGAATATGATATGTGTTGGGGCACT GGGTTGATCTCTGACGAGTTACAGGCTCCACTAAAGATGTTTAGGGCTTTAGCTGTAAGAGGCCCTCTGAGTGCTCAGAA GTTAGAAGAAAGTGGCATTGAACCACCGTCTATCTTTGGTGATCCTGGATTGATTGCTACAAGTCTAGTTTCTCTTCCCG AAAACAAAAAATATAAAGTTTCTATCATTCCACATTATGTAGATCGAAAAGCTGGCGAGACTTTTGCCAAAGAAAAGGGG TTTCATGTCATAAATGTGGATCTTCCCATTGTTAAATTTATGGAGGAAGTAGCCTCTTCTGAACAAGTATGGTCATCTTC ATTACATGGCATCATCTGTTCAGAATCATTGGGCTTACCTACAGCATGGATTAAATTTTCTGAAAAAATTATTGGAGGTG AGTTTAAATTTCATGATTACTTATTGGGAACGCAAAGGAAACCTCGGCGTCCAATAGAGTTGCCAAATAAAAATATTGAT TTAGGAAGAATAGATTTTTTGGAGGAGTTTGATCATAAAATAATTATCAAGAATCTAATATCTGTATTTCCTTATTCTTT ATCTAACAGATCTTTCCTTTCCCGAATTTCATAG
Upstream 100 bases:
>100_bases TGGAAATTGAACAAGTTGAAGCAGTTGTTGGATTATCACCTTAAAAGAATTAAAACATAGACAATATTGACCTCAAAAAA ATCACTAAGGTTTTAATCTC
Downstream 100 bases:
>100_bases ATAAATATACCGTTTTATTTGCCGAATTCTACTACTATTAGCCATGTCTAATAATGAATATTTAGACTTTGTTGTGATTG GAGCTATGAAAGCTGGTACG
Product: putative pyruvyltransferase
Products: NA
Alternate protein names: ExoV Domain-Containing Protein; Xanthan Biosynthesis Pyruvyltransferase GumL; Pyruvyltransferase; GumL Protein; Succinoglycan Biosynthesis Protein; Ketal Pyruvate Transferase PssM; Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKDIRYIIKRTSHFLKYGLHHSLLWARPKHRNWGDDLNPWLFEKLTGKKAVYCPHKSCRRFLMAGSILTGAGEYDMCWGT GLISDELQAPLKMFRALAVRGPLSAQKLEESGIEPPSIFGDPGLIATSLVSLPENKKYKVSIIPHYVDRKAGETFAKEKG FHVINVDLPIVKFMEEVASSEQVWSSSLHGIICSESLGLPTAWIKFSEKIIGGEFKFHDYLLGTQRKPRRPIELPNKNID LGRIDFLEEFDHKIIIKNLISVFPYSLSNRSFLSRIS
Sequences:
>Translated_277_residues MKDIRYIIKRTSHFLKYGLHHSLLWARPKHRNWGDDLNPWLFEKLTGKKAVYCPHKSCRRFLMAGSILTGAGEYDMCWGT GLISDELQAPLKMFRALAVRGPLSAQKLEESGIEPPSIFGDPGLIATSLVSLPENKKYKVSIIPHYVDRKAGETFAKEKG FHVINVDLPIVKFMEEVASSEQVWSSSLHGIICSESLGLPTAWIKFSEKIIGGEFKFHDYLLGTQRKPRRPIELPNKNID LGRIDFLEEFDHKIIIKNLISVFPYSLSNRSFLSRIS >Mature_277_residues MKDIRYIIKRTSHFLKYGLHHSLLWARPKHRNWGDDLNPWLFEKLTGKKAVYCPHKSCRRFLMAGSILTGAGEYDMCWGT GLISDELQAPLKMFRALAVRGPLSAQKLEESGIEPPSIFGDPGLIATSLVSLPENKKYKVSIIPHYVDRKAGETFAKEKG FHVINVDLPIVKFMEEVASSEQVWSSSLHGIICSESLGLPTAWIKFSEKIIGGEFKFHDYLLGTQRKPRRPIELPNKNID LGRIDFLEEFDHKIIIKNLISVFPYSLSNRSFLSRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31557; Mature: 31557
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIRYIIKRTSHFLKYGLHHSLLWARPKHRNWGDDLNPWLFEKLTGKKAVYCPHKSCRR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHH FLMAGSILTGAGEYDMCWGTGLISDELQAPLKMFRALAVRGPLSAQKLEESGIEPPSIFG HHHHCHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC DPGLIATSLVSLPENKKYKVSIIPHYVDRKAGETFAKEKGFHVINVDLPIVKFMEEVASS CCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCHHHHHHCCCEEEECCCHHHHHHHHHHHH EQVWSSSLHGIICSESLGLPTAWIKFSEKIIGGEFKFHDYLLGTQRKPRRPIELPNKNID HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCCCCC LGRIDFLEEFDHKIIIKNLISVFPYSLSNRSFLSRIS CHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHCC >Mature Secondary Structure MKDIRYIIKRTSHFLKYGLHHSLLWARPKHRNWGDDLNPWLFEKLTGKKAVYCPHKSCRR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHH FLMAGSILTGAGEYDMCWGTGLISDELQAPLKMFRALAVRGPLSAQKLEESGIEPPSIFG HHHHCHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC DPGLIATSLVSLPENKKYKVSIIPHYVDRKAGETFAKEKGFHVINVDLPIVKFMEEVASS CCCHHHHHHHHCCCCCCEEEEECCHHHHHHHCHHHHHHCCCEEEECCCHHHHHHHHHHHH EQVWSSSLHGIICSESLGLPTAWIKFSEKIIGGEFKFHDYLLGTQRKPRRPIELPNKNID HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCCCCC LGRIDFLEEFDHKIIIKNLISVFPYSLSNRSFLSRIS CHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA