Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078072

Identifier: 170078072

GI number: 170078072

Start: 1537931

End: 1538929

Strand: Reverse

Name: 170078072

Synonym: SYNPCC7002_A1463

Alternate gene names: NA

Gene position: 1538929-1537931 (Counterclockwise)

Preceding gene: 170078073

Following gene: 170078070

Centisome position: 51.16

GC content: 49.95

Gene sequence:

>999_bases
ATGGTTCAAACCCCAACCCAAACCACCATCCCCGCTTTTCAGAAAACCTTGGGTCAACCCCTAAGCAAAACCCCTATCAA
CACTCTCCAAATTAACCTCGGCAAAAAATGTAACCTCGCCTGCACCCATTGCCATGTTGAGGCCAGCCCGAAGCGCACCG
AGGCACTCAGCCCAGAAATTTGTGCCCAATTGATCCAACTGATTCGCACCTTCCCCCAAATTCAAACGGTGGATCTCACG
GGGGGAGCGCCGGAAATGCACGATGGGTTTAGGCAACTGGTGGCTGCAGCACGGGAAACAGGGAAAGATGTGATTGTGCG
CTCAAACCTAACCATTTTTTTCGTGCCTGGGTACGAAGATTTACCCACCTATTTTGCAGAAAATCAGGTGCGAGTGGTGG
CTTCCCTGCCCTGTTATTTAGAAGATAACGTCGATCGCCAACGGGGTGCGGGAGTGTACCAAGATTCCATTGCGGCCCTA
CAAAAATTAAATGCCTTGGGTTATGGTCGAGATCCCGCCCTAGTCTTGGATTTAGTTTACAATCCGCCCGTGCCCCGAAA
CCAAGACTTTTCCCTCACGCCCAATCAAGCGGCCCTAGAACAGGATTACAAAGCTTATTTAGCACGCCATTTTCAAATTC
AGTTTAATCACCTGTTTACGATCACAAATTTACCCATTGGCCGCGTAAAAAATTATCTCCAGGCCCACGCGCTCTATAAA
CCCTATCTCAGCTTTTTGGCGGCACATCACAACGGGACGACAGTGCCTAATCTCATGTGTCGTAGCCAGCTTTCTGTGGA
TTATGAAGGCAATATTTTCGATTGTGATTTTAACCAGATGGAATCTCTCCCAGCCCGCACTCCCGACGGCCAACCGGTAA
CGGTGCGGCACCTCCTAGAGGCAGAATCCTTAGATGTCATTGAAACGGTGGCGACGAAACCCTATTGTTATGGTTGCACA
GCGGGAAGTGGCTCGAGTTGTGGTGGTGCTTTGAGCTAA

Upstream 100 bases:

>100_bases
AGATTACCAGCTCACCCAACTGACTGAAGACGCCGCCTGTTGTCGCACCGATAGTTGCTGTTAACTAAAAATTCATCCCT
GTTCTGTTATCCCAATCACC

Downstream 100 bases:

>100_bases
GAGACTATCCACTGAATCATTAGGGGTGACTAGCGCGCAATTTTTCTGCTAGTTAATCTGGTCAGATTGCGGCTTGCTGG
GGTAAACGCGAAAACTTGCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEICAQLIQLIRTFPQIQTVDLT
GGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAAL
QKLNALGYGRDPALVLDLVYNPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK
PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLEAESLDVIETVATKPYCYGCT
AGSGSSCGGALS

Sequences:

>Translated_332_residues
MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEICAQLIQLIRTFPQIQTVDLT
GGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAAL
QKLNALGYGRDPALVLDLVYNPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK
PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLEAESLDVIETVATKPYCYGCT
AGSGSSCGGALS
>Mature_332_residues
MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEICAQLIQLIRTFPQIQTVDLT
GGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAAL
QKLNALGYGRDPALVLDLVYNPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK
PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLEAESLDVIETVATKPYCYGCT
AGSGSSCGGALS

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36604; Mature: 36604

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEI
CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCHHHCCCHHH
CAQLIQLIRTFPQIQTVDLTGGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYED
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCHH
LPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAALQKLNALGYGRDPALVLDLVY
HHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE
NPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHH
PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLE
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHH
AESLDVIETVATKPYCYGCTAGSGSSCGGALS
HCCHHHHHHHHCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVQTPTQTTIPAFQKTLGQPLSKTPINTLQINLGKKCNLACTHCHVEASPKRTEALSPEI
CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCHHHCCCHHH
CAQLIQLIRTFPQIQTVDLTGGAPEMHDGFRQLVAAARETGKDVIVRSNLTIFFVPGYED
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCHH
LPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAALQKLNALGYGRDPALVLDLVY
HHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE
NPPVPRNQDFSLTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHH
PYLSFLAAHHNGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESLPARTPDGQPVTVRHLLE
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHH
AESLDVIETVATKPYCYGCTAGSGSSCGGALS
HCCHHHHHHHHCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA