| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is opcA [H]
Identifier: 170078067
GI number: 170078067
Start: 1530971
End: 1532305
Strand: Reverse
Name: opcA [H]
Synonym: SYNPCC7002_A1458
Alternate gene names: 170078067
Gene position: 1532305-1530971 (Counterclockwise)
Preceding gene: 170078068
Following gene: 170078065
Centisome position: 50.94
GC content: 52.66
Gene sequence:
>1335_bases ATGACTATTTCAGCACCCCTTGTTTCTTTGCAAGCTCCGAAGGATGTCTCGATTGAGGAGATTGAAGCGGAACTGGCGCA ACTCTGGCAAAATTACCGCTCCGATGAGGGCATGAGTGCCACCCGGGCCACCACCTTTAGTTTTTTGGTCTATGAGCCGG ACGACTCCCAAGCATTGTTGGCAAGTTTAGGATTTTATTCGGGGCCAATCGATGGGATCGCTGGTTCGCGGACGGTGGCG GCGATTCGCGCTGCTCAAAAAGCCTATGGTTTTGAAGAAACCGGTAAGATTTCACCGGAATTACTCACGAAGCTCCGGGA AATGTGGGAGTGCCAAAGTCAGGATCAAGGCTGTCAACCGTTGACCTATTCGGCAGATCTGAGTAGTTCTGGGGTGGCCG ATGCGATCGCCGCTGCGAATCCCTGTCGAATCATTACCCTTTGTCCCACCACTGGCGAAGATGAAGGCGTTTCCGCCCAG GTCTCGGCTTATTGTCCGATTAATAAACGGGGCGGTAGCACCCTCGTTTGTTGCGAGTACATTACCCTGAGTGGTACAGC GGCAGCCCTAGAGCGCATTGGGGGCTTAATTACGGCTTTAATGGTGAGAGACTTGCCAAAATTTGTTTGGTGGAAAGCAG TGCCAGATAGCAACTATGGCCTTTTTCAGCGGCTGATGGCCGAAGCAGATACGCTCATTCTCGATTCTAGTGGCTTCCGG GATTCTGAAGCGGATCTTAAGGTTGTATGCGAACTGTTGCAGCAGGGCACCAACACCGCTGATCTCAATTGGAGTCGTTT AGCAGCTTGGCAAGAGTTAACCGCCGCTGCCTTTGATCCCCCAGAACGACGGGAAGCCATCTGGGATGTAGACCATGTGA CCCTCAACTACGAAAAAGGGAATGCCACCCAAGCGATTTTGTTTTTAGGCTGGCTCGCCAGTCGCCTCGGCTGGAATCCG ACGGACATCGAACGGGAATCAGGGGATTATGAGATTCACCGCATTCGTTTTGGCGATCGCCACAAAAAAGCAATTACGGC TGAACTAGTAGGTCTACCCATGGCCGATGTGGGGGATATCGTCGGCGATCTCGTGAGCCTCAAACTCACCTCCAATAACC TTGATGCCGATTGTTGCACCGTGATTTGTTCAGAAACCTCTGGCTGTATGCACATGGAATCGGGTGGTGGTGCGCAATCC TGCCGCATTGAACAGGTCACCCCCTTGGCCGATCAAGCAACCGAGCATCTCCTGGGGCAACAGCTCCAACGCTGGGGCAA AGATGTTCTCTACACCGAAACCATGGAACAGGTGCGTCAAATCCTCGCCCTTTAA
Upstream 100 bases:
>100_bases GAACAAATATCGGCTCTCAGTGTTTGTTTATTTTTGATTTCTTAATTCTTTTCGCACGCAAATTTCGCAAAAAACTCTCT AAGCAATCTCTGGAAAAATT
Downstream 100 bases:
>100_bases CCCTTTCAATTTTATTTATGGTCAGTGGCTGAGGCGAACCTGAAACCGATCCGCCTGGGTAAGTTGAATTTTATCCGCTT GCATGAGCTGCTTGAGGAGG
Product: putative OxPP cycle protein opcA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTISAPLVSLQAPKDVSIEEIEAELAQLWQNYRSDEGMSATRATTFSFLVYEPDDSQALLASLGFYSGPIDGIAGSRTVA AIRAAQKAYGFEETGKISPELLTKLREMWECQSQDQGCQPLTYSADLSSSGVADAIAAANPCRIITLCPTTGEDEGVSAQ VSAYCPINKRGGSTLVCCEYITLSGTAAALERIGGLITALMVRDLPKFVWWKAVPDSNYGLFQRLMAEADTLILDSSGFR DSEADLKVVCELLQQGTNTADLNWSRLAAWQELTAAAFDPPERREAIWDVDHVTLNYEKGNATQAILFLGWLASRLGWNP TDIERESGDYEIHRIRFGDRHKKAITAELVGLPMADVGDIVGDLVSLKLTSNNLDADCCTVICSETSGCMHMESGGGAQS CRIEQVTPLADQATEHLLGQQLQRWGKDVLYTETMEQVRQILAL
Sequences:
>Translated_444_residues MTISAPLVSLQAPKDVSIEEIEAELAQLWQNYRSDEGMSATRATTFSFLVYEPDDSQALLASLGFYSGPIDGIAGSRTVA AIRAAQKAYGFEETGKISPELLTKLREMWECQSQDQGCQPLTYSADLSSSGVADAIAAANPCRIITLCPTTGEDEGVSAQ VSAYCPINKRGGSTLVCCEYITLSGTAAALERIGGLITALMVRDLPKFVWWKAVPDSNYGLFQRLMAEADTLILDSSGFR DSEADLKVVCELLQQGTNTADLNWSRLAAWQELTAAAFDPPERREAIWDVDHVTLNYEKGNATQAILFLGWLASRLGWNP TDIERESGDYEIHRIRFGDRHKKAITAELVGLPMADVGDIVGDLVSLKLTSNNLDADCCTVICSETSGCMHMESGGGAQS CRIEQVTPLADQATEHLLGQQLQRWGKDVLYTETMEQVRQILAL >Mature_443_residues TISAPLVSLQAPKDVSIEEIEAELAQLWQNYRSDEGMSATRATTFSFLVYEPDDSQALLASLGFYSGPIDGIAGSRTVAA IRAAQKAYGFEETGKISPELLTKLREMWECQSQDQGCQPLTYSADLSSSGVADAIAAANPCRIITLCPTTGEDEGVSAQV SAYCPINKRGGSTLVCCEYITLSGTAAALERIGGLITALMVRDLPKFVWWKAVPDSNYGLFQRLMAEADTLILDSSGFRD SEADLKVVCELLQQGTNTADLNWSRLAAWQELTAAAFDPPERREAIWDVDHVTLNYEKGNATQAILFLGWLASRLGWNPT DIERESGDYEIHRIRFGDRHKKAITAELVGLPMADVGDIVGDLVSLKLTSNNLDADCCTVICSETSGCMHMESGGGAQSC RIEQVTPLADQATEHLLGQQLQRWGKDVLYTETMEQVRQILAL
Specific function: May be involved in the functional assembly of glucose 6- phosphate dehydrogenase [H]
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019297 - InterPro: IPR004555 - InterPro: IPR002477 [H]
Pfam domain/function: PF10128 OpcA_G6PD_assem; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 48424; Mature: 48293
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISAPLVSLQAPKDVSIEEIEAELAQLWQNYRSDEGMSATRATTFSFLVYEPDDSQALL CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEECCCCCHHHH ASLGFYSGPIDGIAGSRTVAAIRAAQKAYGFEETGKISPELLTKLREMWECQSQDQGCQP HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC LTYSADLSSSGVADAIAAANPCRIITLCPTTGEDEGVSAQVSAYCPINKRGGSTLVCCEY EEEECCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE ITLSGTAAALERIGGLITALMVRDLPKFVWWKAVPDSNYGLFQRLMAEADTLILDSSGFR EEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEECCCCC DSEADLKVVCELLQQGTNTADLNWSRLAAWQELTAAAFDPPERREAIWDVDHVTLNYEKG CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCC NATQAILFLGWLASRLGWNPTDIERESGDYEIHRIRFGDRHKKAITAELVGLPMADVGDI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHH VGDLVSLKLTSNNLDADCCTVICSETSGCMHMESGGGAQSCRIEQVTPLADQATEHLLGQ HHHHEEEEEECCCCCHHHHHHEECCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHH QLQRWGKDVLYTETMEQVRQILAL HHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TISAPLVSLQAPKDVSIEEIEAELAQLWQNYRSDEGMSATRATTFSFLVYEPDDSQALL CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEECCCCCHHHH ASLGFYSGPIDGIAGSRTVAAIRAAQKAYGFEETGKISPELLTKLREMWECQSQDQGCQP HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC LTYSADLSSSGVADAIAAANPCRIITLCPTTGEDEGVSAQVSAYCPINKRGGSTLVCCEY EEEECCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE ITLSGTAAALERIGGLITALMVRDLPKFVWWKAVPDSNYGLFQRLMAEADTLILDSSGFR EEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEECCCCC DSEADLKVVCELLQQGTNTADLNWSRLAAWQELTAAAFDPPERREAIWDVDHVTLNYEKG CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCC NATQAILFLGWLASRLGWNPTDIERESGDYEIHRIRFGDRHKKAITAELVGLPMADVGDI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHH VGDLVSLKLTSNNLDADCCTVICSETSGCMHMESGGGAQSCRIEQVTPLADQATEHLLGQ HHHHEEEEEECCCCCHHHHHHEECCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHH QLQRWGKDVLYTETMEQVRQILAL HHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]