| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pyrD [H]
Identifier: 170078051
GI number: 170078051
Start: 1511550
End: 1512566
Strand: Reverse
Name: pyrD [H]
Synonym: SYNPCC7002_A1442
Alternate gene names: 170078051
Gene position: 1512566-1511550 (Counterclockwise)
Preceding gene: 170078052
Following gene: 170078049
Centisome position: 50.28
GC content: 45.23
Gene sequence:
>1017_bases ATGGATTTAACCACACAATATTTAGGTCTGACCCTGCGATCGCCATTAATTGTTGGTGCAGCCGCTCCCTTAACTGAGGA CATCGATAACATCAAACGGATGGAGGATGCCGGAGCCGGAGCCGTCGTTTTACATTCCCTCTTTGAAGAACAAATTCGTA AAGAAAAACTCGAATTGCACCATCACTTCACCTATGGAACGGACTCCTTTGCCGAAGCCTTAAATTATTTCCCAGAGAAT GCTTCCAATGTTTTTCATGTAGGTGTTGAAACCTATTTAGAACATATTCGGACTGCTAAATCCGCCGTCGATATGCCGAT TATTGCCAGCCTCAACGGTTCTCACCAAGGGGAATGGGAACACACCGCCAAACTGATGGAACAAGCCGGAGCCGATGCCA TTGAATTGAACATTTATTATGTCCCGACGGATATTAATAAAAACGGTTCAGAGGTGGAGTATGAATATATTCAAATCGTG CGGACAGTGCGGGAAAATTTAAATATTCCCGTTGCCGTAAAGCTGAGTCCGTTCTTTAGCAACATGGCAAATATAGCGAA ACGGTTAGTTGATAATGGGGCGAGTGGCTTAGTTTTATTTAACCGTTTTTATCAGCCGGATATTGATATCGAAAACCTGG AAGTCACCCCGAATTTAATCCTGAGTAGCCCGTTGGATATGCGTCTGCCGATGCGCTGGATTGCGATGCTTTATGGGCGT TTAGATGTGGACTTTGCGGCGACCAGCGGCATTCAACGGGGAACCGATGCGATCAAAATGTTAATGGCGGGGGCAAAAGT GACGGCTTTAGTGGCGACTTTATTACGCCATGGTATTCATCACATTGAAACCATTGAAACAGAAATGATGCAATGGCTCG AAGAACATGAATATCTATCCCTTGAACAATTGCGGGGCAGCATGAGCCAGATTAATTGTCCCGATGAAAGTGCCTTTGAA CGGGCGCAATATATGCGGGCGATTCAATCCTACCAACCAGAGCGACATACACTTTGA
Upstream 100 bases:
>100_bases CGAATACCTTGCCAACCGTCCCGAAGCCTAACGCCTCAAGTCCCCCTTACTTCAGGGGGATTTAGGGGATGTAAAACCAT TAACCTACCGGAAAACCACC
Downstream 100 bases:
>100_bases AGTTTGCTATTGTTGCAGGGCCTTGGCGATCGCCTTAAGGGCACGGGGGTCAGACAACATCCAAGGATGTAAAGGTACGG GCAACTGCACGCCGGTGCCA
Product: dihydroorotate dehydrogenase 2
Products: NA
Alternate protein names: DHOdehase; DHOD; DHODase; Dihydroorotate oxidase [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MDLTTQYLGLTLRSPLIVGAAAPLTEDIDNIKRMEDAGAGAVVLHSLFEEQIRKEKLELHHHFTYGTDSFAEALNYFPEN ASNVFHVGVETYLEHIRTAKSAVDMPIIASLNGSHQGEWEHTAKLMEQAGADAIELNIYYVPTDINKNGSEVEYEYIQIV RTVRENLNIPVAVKLSPFFSNMANIAKRLVDNGASGLVLFNRFYQPDIDIENLEVTPNLILSSPLDMRLPMRWIAMLYGR LDVDFAATSGIQRGTDAIKMLMAGAKVTALVATLLRHGIHHIETIETEMMQWLEEHEYLSLEQLRGSMSQINCPDESAFE RAQYMRAIQSYQPERHTL
Sequences:
>Translated_338_residues MDLTTQYLGLTLRSPLIVGAAAPLTEDIDNIKRMEDAGAGAVVLHSLFEEQIRKEKLELHHHFTYGTDSFAEALNYFPEN ASNVFHVGVETYLEHIRTAKSAVDMPIIASLNGSHQGEWEHTAKLMEQAGADAIELNIYYVPTDINKNGSEVEYEYIQIV RTVRENLNIPVAVKLSPFFSNMANIAKRLVDNGASGLVLFNRFYQPDIDIENLEVTPNLILSSPLDMRLPMRWIAMLYGR LDVDFAATSGIQRGTDAIKMLMAGAKVTALVATLLRHGIHHIETIETEMMQWLEEHEYLSLEQLRGSMSQINCPDESAFE RAQYMRAIQSYQPERHTL >Mature_338_residues MDLTTQYLGLTLRSPLIVGAAAPLTEDIDNIKRMEDAGAGAVVLHSLFEEQIRKEKLELHHHFTYGTDSFAEALNYFPEN ASNVFHVGVETYLEHIRTAKSAVDMPIIASLNGSHQGEWEHTAKLMEQAGADAIELNIYYVPTDINKNGSEVEYEYIQIV RTVRENLNIPVAVKLSPFFSNMANIAKRLVDNGASGLVLFNRFYQPDIDIENLEVTPNLILSSPLDMRLPMRWIAMLYGR LDVDFAATSGIQRGTDAIKMLMAGAKVTALVATLLRHGIHHIETIETEMMQWLEEHEYLSLEQLRGSMSQINCPDESAFE RAQYMRAIQSYQPERHTL
Specific function: Unknown
COG id: COG0167
COG function: function code F; Dihydroorotate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082059, Length=326, Percent_Identity=21.4723926380368, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR005720 - InterPro: IPR012135 - InterPro: IPR001295 [H]
Pfam domain/function: PF01180 DHO_dh [H]
EC number: =1.3.3.1 [H]
Molecular weight: Translated: 38152; Mature: 38152
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTTQYLGLTLRSPLIVGAAAPLTEDIDNIKRMEDAGAGAVVLHSLFEEQIRKEKLELH CCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HHFTYGTDSFAEALNYFPENASNVFHVGVETYLEHIRTAKSAVDMPIIASLNGSHQGEWE HHCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH HTAKLMEQAGADAIELNIYYVPTDINKNGSEVEYEYIQIVRTVRENLNIPVAVKLSPFFS HHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHH NMANIAKRLVDNGASGLVLFNRFYQPDIDIENLEVTPNLILSSPLDMRLPMRWIAMLYGR HHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCEEECCCHHCCCCCCCCCCHHHHHHHHHH LDVDFAATSGIQRGTDAIKMLMAGAKVTALVATLLRHGIHHIETIETEMMQWLEEHEYLS CCCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LEQLRGSMSQINCPDESAFERAQYMRAIQSYQPERHTL HHHHHCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDLTTQYLGLTLRSPLIVGAAAPLTEDIDNIKRMEDAGAGAVVLHSLFEEQIRKEKLELH CCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HHFTYGTDSFAEALNYFPENASNVFHVGVETYLEHIRTAKSAVDMPIIASLNGSHQGEWE HHCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH HTAKLMEQAGADAIELNIYYVPTDINKNGSEVEYEYIQIVRTVRENLNIPVAVKLSPFFS HHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHH NMANIAKRLVDNGASGLVLFNRFYQPDIDIENLEVTPNLILSSPLDMRLPMRWIAMLYGR HHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCEEECCCHHCCCCCCCCCCHHHHHHHHHH LDVDFAATSGIQRGTDAIKMLMAGAKVTALVATLLRHGIHHIETIETEMMQWLEEHEYLS CCCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LEQLRGSMSQINCPDESAFERAQYMRAIQSYQPERHTL HHHHHCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]