| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ppx [H]
Identifier: 170078010
GI number: 170078010
Start: 1467488
End: 1469128
Strand: Direct
Name: ppx [H]
Synonym: SYNPCC7002_A1401
Alternate gene names: 170078010
Gene position: 1467488-1469128 (Clockwise)
Preceding gene: 170078008
Following gene: 170078011
Centisome position: 48.79
GC content: 49.73
Gene sequence:
>1641_bases ATGGCTACTTCCGTCTATCAGCTTAAAACGAATTCCACTCAATTTGCGAATGTCACCCAAGGGGAGGACTGTACCCTAGC AGCGATTGATATCGGCACCAACTCAATTCACATGGTGATTGTCAAAATTCAACCCAGCCTGCCCGCATTTACAATTGTGG CCCGGGAAAAAGATACGGTGCGCCTCGGTCATCGCGATCGCCTCACAGGAAACCTGACGGAAGCCGCCATGGATCGTTCT TTAAATGCCCTCCGTCGTTGTCAGGATCTAGCGACGAGTTTTCAGGTGGATTCTTTAGTAGCAGTGGCAACCAGTGCCGT GCGAGAAGCCCCCAACGGTCGAGAATTTTTACAACGGATTGAAGCAGAATTAGGGTTAGAAGTTGATCTAATCTCCGGCC AAGAAGAAGCGCGCCGTATCTACCTCGGTGTTTTATCAGCCGTTGACTTTAACCAACAACCCCATGTTTTGATTGATATT GGGGGCGGTTCGACAGAAATTAGCTTGGTGGAAAGCCATGAAGCACGCTTTCTTAGCAGCACAAAGGTGGGAGCGGTGCG GTTAACCCAGGACTTTGTGAATACTGATCCGATTAGTAACCGAGAATTTGCGGCCCTACAAGCTTATATTCGGGGGATGT TAGAGCGTCCCATTGAAGAACTACAAGAGCATCTTTTCCCGGAAGAACAGGTACAAATGATCGGGACCTCTGGCACCATT GAAACCTTGGCAGCAATGCACGCGATGGCCAATTTAGGAAATGTGCCGAGTCCCCTCCATGGCTATACGTTTTCGCGTCA GGATTTGAGCAAACTGATTCAACAGATGCGGGAGCTTAATTGTCGGGAGCGCTCAAATTTACCAGGAATGTCCGATAAGC GCGCAGAAATTATTCTGGCAGGGGCAATCATCCTCCAAGAAGCGATGGATCTATTGCAGCTGAAAAAAATTACCCTCTGT GAACGGGCGTTGCGGGAAGGGGTGATCGTCGACTGGATGCTTTCCCATGGTTTGATTGAAAGTCGCCTGCAATACCAAAG TTCGATTCGGGAACGGAGTGTGATGGCGATCGCCAAAAAATATCGCGTTGATTTGGTCGCCAGTAAACGCACTGCCGTAT TTTCCCTGAGTCTCTTTGATCAGCTCCAGGGGGGGCTGCACCAATGGGACACCGAAGCGAGGGAGATGCTCTGGGCGGCG GCGATTCTCCATAACTGTGGCCTTTACATTAGCCATGCGGCTCACCATAAACATTCCTACTATCTGATTCGTAATGCAGA GCTCCTCGGCTTTAATGAAACCCAATTAGAAATCGTCGCGAACCTCGCCCGCTACCACCGCAAAAGCAAGCCGAAGAAAA AACACGAAAATTATCAAAATCTCATCCACAAAGAACACCGACAGATGGTGAGTGAGTTGAGTGCGATCATGCGGCTTGCG GTGGCCCTTGACCGACGCCAGGTAGGGGCGATCGCCGAAATTCAGTGTGACTTTGATGCGAAACAACGCCTACTCACCCT CAAGCTAATCCCAACCCATAGGGATGATGCCTGCGAACTAGAGCTCTGGAGTTTAAACTATAACAAGGAGATCTTTGAAG AAGAATTTGCAGTGACCGTGGCCGCCCATCTATGCCCCTAA
Upstream 100 bases:
>100_bases GAAACCATAGATGTTCAACGAAGAGATGTCATAAAAAATCAGTAAATCGGAGGTAATCCTTAATAATAGAGAAGTCAGCA AAGATGACAGACATAAATCT
Downstream 100 bases:
>100_bases ACTCTTAGAATAGTTAATCCACGTTAATCTTTTCTTAAAATCCCTGTACCAATGCGGCGGCGATCGCCCCTGTGACTAGC CCAGATAGCCCCTTACTGCT
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MATSVYQLKTNSTQFANVTQGEDCTLAAIDIGTNSIHMVIVKIQPSLPAFTIVAREKDTVRLGHRDRLTGNLTEAAMDRS LNALRRCQDLATSFQVDSLVAVATSAVREAPNGREFLQRIEAELGLEVDLISGQEEARRIYLGVLSAVDFNQQPHVLIDI GGGSTEISLVESHEARFLSSTKVGAVRLTQDFVNTDPISNREFAALQAYIRGMLERPIEELQEHLFPEEQVQMIGTSGTI ETLAAMHAMANLGNVPSPLHGYTFSRQDLSKLIQQMRELNCRERSNLPGMSDKRAEIILAGAIILQEAMDLLQLKKITLC ERALREGVIVDWMLSHGLIESRLQYQSSIRERSVMAIAKKYRVDLVASKRTAVFSLSLFDQLQGGLHQWDTEAREMLWAA AILHNCGLYISHAAHHKHSYYLIRNAELLGFNETQLEIVANLARYHRKSKPKKKHENYQNLIHKEHRQMVSELSAIMRLA VALDRRQVGAIAEIQCDFDAKQRLLTLKLIPTHRDDACELELWSLNYNKEIFEEEFAVTVAAHLCP
Sequences:
>Translated_546_residues MATSVYQLKTNSTQFANVTQGEDCTLAAIDIGTNSIHMVIVKIQPSLPAFTIVAREKDTVRLGHRDRLTGNLTEAAMDRS LNALRRCQDLATSFQVDSLVAVATSAVREAPNGREFLQRIEAELGLEVDLISGQEEARRIYLGVLSAVDFNQQPHVLIDI GGGSTEISLVESHEARFLSSTKVGAVRLTQDFVNTDPISNREFAALQAYIRGMLERPIEELQEHLFPEEQVQMIGTSGTI ETLAAMHAMANLGNVPSPLHGYTFSRQDLSKLIQQMRELNCRERSNLPGMSDKRAEIILAGAIILQEAMDLLQLKKITLC ERALREGVIVDWMLSHGLIESRLQYQSSIRERSVMAIAKKYRVDLVASKRTAVFSLSLFDQLQGGLHQWDTEAREMLWAA AILHNCGLYISHAAHHKHSYYLIRNAELLGFNETQLEIVANLARYHRKSKPKKKHENYQNLIHKEHRQMVSELSAIMRLA VALDRRQVGAIAEIQCDFDAKQRLLTLKLIPTHRDDACELELWSLNYNKEIFEEEFAVTVAAHLCP >Mature_545_residues ATSVYQLKTNSTQFANVTQGEDCTLAAIDIGTNSIHMVIVKIQPSLPAFTIVAREKDTVRLGHRDRLTGNLTEAAMDRSL NALRRCQDLATSFQVDSLVAVATSAVREAPNGREFLQRIEAELGLEVDLISGQEEARRIYLGVLSAVDFNQQPHVLIDIG GGSTEISLVESHEARFLSSTKVGAVRLTQDFVNTDPISNREFAALQAYIRGMLERPIEELQEHLFPEEQVQMIGTSGTIE TLAAMHAMANLGNVPSPLHGYTFSRQDLSKLIQQMRELNCRERSNLPGMSDKRAEIILAGAIILQEAMDLLQLKKITLCE RALREGVIVDWMLSHGLIESRLQYQSSIRERSVMAIAKKYRVDLVASKRTAVFSLSLFDQLQGGLHQWDTEAREMLWAAA ILHNCGLYISHAAHHKHSYYLIRNAELLGFNETQLEIVANLARYHRKSKPKKKHENYQNLIHKEHRQMVSELSAIMRLAV ALDRRQVGAIAEIQCDFDAKQRLLTLKLIPTHRDDACELELWSLNYNKEIFEEEFAVTVAAHLCP
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=432, Percent_Identity=31.9444444444444, Blast_Score=185, Evalue=8e-48, Organism=Escherichia coli, GI48994966, Length=494, Percent_Identity=28.7449392712551, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 61483; Mature: 61352
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00435 PEROXIDASE_1 ; PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSVYQLKTNSTQFANVTQGEDCTLAAIDIGTNSIHMVIVKIQPSLPAFTIVAREKDTV CCCCEEEEECCCCEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCE RLGHRDRLTGNLTEAAMDRSLNALRRCQDLATSFQVDSLVAVATSAVREAPNGREFLQRI ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EAELGLEVDLISGQEEARRIYLGVLSAVDFNQQPHVLIDIGGGSTEISLVESHEARFLSS HHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCHHHHHHC TKVGAVRLTQDFVNTDPISNREFAALQAYIRGMLERPIEELQEHLFPEEQVQMIGTSGTI CCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHH ETLAAMHAMANLGNVPSPLHGYTFSRQDLSKLIQQMRELNCRERSNLPGMSDKRAEIILA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHEEEH GAIILQEAMDLLQLKKITLCERALREGVIVDWMLSHGLIESRLQYQSSIRERSVMAIAKK HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRVDLVASKRTAVFSLSLFDQLQGGLHQWDTEAREMLWAAAILHNCGLYISHAAHHKHSY HHHEEEECCCHHEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCE YLIRNAELLGFNETQLEIVANLARYHRKSKPKKKHENYQNLIHKEHRQMVSELSAIMRLA EEEECCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALDRRQVGAIAEIQCDFDAKQRLLTLKLIPTHRDDACELELWSLNYNKEIFEEEFAVTV HHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHH AAHLCP HHHCCC >Mature Secondary Structure ATSVYQLKTNSTQFANVTQGEDCTLAAIDIGTNSIHMVIVKIQPSLPAFTIVAREKDTV CCCEEEEECCCCEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCE RLGHRDRLTGNLTEAAMDRSLNALRRCQDLATSFQVDSLVAVATSAVREAPNGREFLQRI ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EAELGLEVDLISGQEEARRIYLGVLSAVDFNQQPHVLIDIGGGSTEISLVESHEARFLSS HHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCHHHHHHC TKVGAVRLTQDFVNTDPISNREFAALQAYIRGMLERPIEELQEHLFPEEQVQMIGTSGTI CCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHH ETLAAMHAMANLGNVPSPLHGYTFSRQDLSKLIQQMRELNCRERSNLPGMSDKRAEIILA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHEEEH GAIILQEAMDLLQLKKITLCERALREGVIVDWMLSHGLIESRLQYQSSIRERSVMAIAKK HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRVDLVASKRTAVFSLSLFDQLQGGLHQWDTEAREMLWAAAILHNCGLYISHAAHHKHSY HHHEEEECCCHHEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCE YLIRNAELLGFNETQLEIVANLARYHRKSKPKKKHENYQNLIHKEHRQMVSELSAIMRLA EEEECCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALDRRQVGAIAEIQCDFDAKQRLLTLKLIPTHRDDACELELWSLNYNKEIFEEEFAVTV HHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHH AAHLCP HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]