Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is yycG [H]

Identifier: 170077998

GI number: 170077998

Start: 1448359

End: 1450362

Strand: Reverse

Name: yycG [H]

Synonym: SYNPCC7002_A1384

Alternate gene names: 170077998

Gene position: 1450362-1448359 (Counterclockwise)

Preceding gene: 170077999

Following gene: 170077994

Centisome position: 48.22

GC content: 51.8

Gene sequence:

>2004_bases
ATGAGTATTCAAACCTCGGTTGTCAAACAATTATTTGAAGCCGTTCCCCATGGGCGATCGCAACTCTATTTCAAATCTTC
CCTAACGGCACTCTCCCACGCGATGGAAGATCAAATCCTTGCAGGTCAAGATTCCCCCTTGGTGATCGCCAGCTTCCAGC
AAGAAAGATACTACCGCCAGGAAGCAACCCGTTATCGTCGCATTGCCGATAAATCCCAACAGGTTTACGTCCTCGCGGCC
CCAGAAACAGAATTTGAAAACGCTTCTGATGCCTACGAGCGCATTGCCTTTACGCCAGATGATGCCCTAAGCGAAGAGTG
GCACCTCGTGGTGATTGGGGAAAATTTTGCCAGTTGTCTCCTCTGCCGAGAAAAACACAACAATTCTGAAAAAGGAGATC
ATTTCGCCGATAATGCCCGTCGTTTTGAAGGCATTTGGACCGAAGACCGCAACATTACCGAAAAAGCAGCGGAAATCCTC
CTCGATCGCATTGCCCAATATCGCCCGGAGCTCCAGGAAAAAGTTCAAGCGGCCAAGGAAACTTACCTCCAAAATGGTCA
CCAAGATCTAACGGAACATCAGCCTAGTTCCACCGCCGATCCCTTTGTGCAGCGCTTGGTGAACTATCTCCAGGCGGGTC
AATACAAAATCCTTAAAGCCAACCGCTCCCTGGCAAACAAAGAACAAAAGGAGCGTTTAATTAATACGGTCACAGCAGCC
ATTCGGCGATCGCTCGACACCGAAGACATCTTGCAATTGGCCGTCGAAAAATTAGGAGAAGGTCTCGGAGTCTGTCGCTG
CATTATTTACCGTTGCAAAGAGTCGGACGAACAAGCCCAGATCCAGCATGAATTTCTCCATGGGGATCAAATTTCTGTAA
AAGGTCGCAATTGGCCCCTGAAGGATAATCCCCTCTTTCAAAAAGTTGTCTCCCTGGGGGAAGCCCTCGGCATTGATAAT
ACCGAGCAAGATCCAGACTTTATCAAAGACCAGCTAGAAACCCTCACCCAAACCTGTTCCATTGTCTCCTGGCTACTGGT
GCCGGTACTCTACCAAGGGCGACTGATCGGCATGATCGAGTTACATCACTGCCACCCAGAGGCAATCCACTGGCGACAGG
AAGATATTGCCCTTGTCGGGGCGATCGCCATCCAAGTAGGTGTGGCCCTAATTCAGGCCGAAGCCTACAACAACCTCGAA
GAACTCAACGAACAATTGGCGGCCCTTGACCGTACCCGTTCTAACCTTGTGGCGATCACAGGCCATGAACTCCGGACACC
TTTATCGACGATTCAAGTCTGCCTAGAAAGCCTTGCCAATGAGCCGGATATGCCGGAGGAACTGCGCCAGGTGATGCTAG
ATACCGCCCTCCAGGATGCAGAACGTCTGCGCACCCTCGTCCAGGATTTTCTGACCCTGTCCCAGCTCGAAAGTGGTCGG
GTGGAGTGGAATATTGAACCCCTGATGCTCTATGAATGTGTGGAGCTGGCCATGAGCCACGTGCGGGCCAAACGTTATCA
AAGTGGCGGTCAACCCCTGCCCCAACTGATCAATCAGGTTTCACCCGATTTGCCCCTCGTCCAAGCTGACGGAGAATGGC
TCGTGGAGGTCATCGCCAAGTTGCTGGACAATGCCTGTAAATTTAGCGATGCCAAGCAGGGTCAAGTGGCGATCGCCATC
ACCGCCGAAGATCCCCATAAACTCACCGTGAGCATTATCGATAATGGCCGGGGCATTGAACCTAAACGCCTCGAAACCGT
CTTTGATCGCTTTTACCAAGAAGAAGGGGCATTGCGACGGAGCGCTGGCGGCACTGGCTTAGGATTAGCGATTTGTCGCC
AGATTGTCACCGCCTGGGGGGGAGCGATCTGGGCAGAATCCGAAGGCAAAAATCAGGGGAGTCAATTTTCCTTTACGGTG
CCGGTCTTTGAAGAACCCAGCCCACCGAAAACGAACCAGACCAGCAAAACAAAAACGAAAACGAAGCGTTCCCGGCGTCG
CTAA

Upstream 100 bases:

>100_bases
AAAATTGATCAATATTGGGTGATCAAGGATAATCTAGGGAATTCCTCTGGTCCATCGTTCGTAGAAGGCGACTATTCCTT
TCGGGAAAAAGCATTTCTTA

Downstream 100 bases:

>100_bases
CAAACGCTCACAAAACTGAGCAATTCACCTTAAGCTTTGTGAATATTCCCAACTAAATATCAGCATGGGCCTACAGAGGA
CTAAGGGCGCAGGACAATAA

Product: sensory transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MSIQTSVVKQLFEAVPHGRSQLYFKSSLTALSHAMEDQILAGQDSPLVIASFQQERYYRQEATRYRRIADKSQQVYVLAA
PETEFENASDAYERIAFTPDDALSEEWHLVVIGENFASCLLCREKHNNSEKGDHFADNARRFEGIWTEDRNITEKAAEIL
LDRIAQYRPELQEKVQAAKETYLQNGHQDLTEHQPSSTADPFVQRLVNYLQAGQYKILKANRSLANKEQKERLINTVTAA
IRRSLDTEDILQLAVEKLGEGLGVCRCIIYRCKESDEQAQIQHEFLHGDQISVKGRNWPLKDNPLFQKVVSLGEALGIDN
TEQDPDFIKDQLETLTQTCSIVSWLLVPVLYQGRLIGMIELHHCHPEAIHWRQEDIALVGAIAIQVGVALIQAEAYNNLE
ELNEQLAALDRTRSNLVAITGHELRTPLSTIQVCLESLANEPDMPEELRQVMLDTALQDAERLRTLVQDFLTLSQLESGR
VEWNIEPLMLYECVELAMSHVRAKRYQSGGQPLPQLINQVSPDLPLVQADGEWLVEVIAKLLDNACKFSDAKQGQVAIAI
TAEDPHKLTVSIIDNGRGIEPKRLETVFDRFYQEEGALRRSAGGTGLGLAICRQIVTAWGGAIWAESEGKNQGSQFSFTV
PVFEEPSPPKTNQTSKTKTKTKRSRRR

Sequences:

>Translated_667_residues
MSIQTSVVKQLFEAVPHGRSQLYFKSSLTALSHAMEDQILAGQDSPLVIASFQQERYYRQEATRYRRIADKSQQVYVLAA
PETEFENASDAYERIAFTPDDALSEEWHLVVIGENFASCLLCREKHNNSEKGDHFADNARRFEGIWTEDRNITEKAAEIL
LDRIAQYRPELQEKVQAAKETYLQNGHQDLTEHQPSSTADPFVQRLVNYLQAGQYKILKANRSLANKEQKERLINTVTAA
IRRSLDTEDILQLAVEKLGEGLGVCRCIIYRCKESDEQAQIQHEFLHGDQISVKGRNWPLKDNPLFQKVVSLGEALGIDN
TEQDPDFIKDQLETLTQTCSIVSWLLVPVLYQGRLIGMIELHHCHPEAIHWRQEDIALVGAIAIQVGVALIQAEAYNNLE
ELNEQLAALDRTRSNLVAITGHELRTPLSTIQVCLESLANEPDMPEELRQVMLDTALQDAERLRTLVQDFLTLSQLESGR
VEWNIEPLMLYECVELAMSHVRAKRYQSGGQPLPQLINQVSPDLPLVQADGEWLVEVIAKLLDNACKFSDAKQGQVAIAI
TAEDPHKLTVSIIDNGRGIEPKRLETVFDRFYQEEGALRRSAGGTGLGLAICRQIVTAWGGAIWAESEGKNQGSQFSFTV
PVFEEPSPPKTNQTSKTKTKTKRSRRR
>Mature_666_residues
SIQTSVVKQLFEAVPHGRSQLYFKSSLTALSHAMEDQILAGQDSPLVIASFQQERYYRQEATRYRRIADKSQQVYVLAAP
ETEFENASDAYERIAFTPDDALSEEWHLVVIGENFASCLLCREKHNNSEKGDHFADNARRFEGIWTEDRNITEKAAEILL
DRIAQYRPELQEKVQAAKETYLQNGHQDLTEHQPSSTADPFVQRLVNYLQAGQYKILKANRSLANKEQKERLINTVTAAI
RRSLDTEDILQLAVEKLGEGLGVCRCIIYRCKESDEQAQIQHEFLHGDQISVKGRNWPLKDNPLFQKVVSLGEALGIDNT
EQDPDFIKDQLETLTQTCSIVSWLLVPVLYQGRLIGMIELHHCHPEAIHWRQEDIALVGAIAIQVGVALIQAEAYNNLEE
LNEQLAALDRTRSNLVAITGHELRTPLSTIQVCLESLANEPDMPEELRQVMLDTALQDAERLRTLVQDFLTLSQLESGRV
EWNIEPLMLYECVELAMSHVRAKRYQSGGQPLPQLINQVSPDLPLVQADGEWLVEVIAKLLDNACKFSDAKQGQVAIAIT
AEDPHKLTVSIIDNGRGIEPKRLETVFDRFYQEEGALRRSAGGTGLGLAICRQIVTAWGGAIWAESEGKNQGSQFSFTVP
VFEEPSPPKTNQTSKTKTKTKRSRRR

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=282, Percent_Identity=29.0780141843972, Blast_Score=103, Evalue=5e-23,
Organism=Escherichia coli, GI1786600, Length=238, Percent_Identity=30.672268907563, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=30.9623430962343, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1786912, Length=241, Percent_Identity=31.5352697095436, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI87081816, Length=254, Percent_Identity=30.7086614173228, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=28.6324786324786, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1789149, Length=242, Percent_Identity=28.099173553719, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=26.4957264957265, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786783, Length=354, Percent_Identity=24.2937853107345, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=28.2868525896414, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=28.5123966942149, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787894, Length=258, Percent_Identity=26.3565891472868, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1790346, Length=230, Percent_Identity=26.9565217391304, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790861, Length=228, Percent_Identity=27.6315789473684, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1787374, Length=218, Percent_Identity=29.8165137614679, Blast_Score=62, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322044, Length=82, Percent_Identity=43.9024390243902, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 75262; Mature: 75131

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50109 HIS_KIN ; PS50046 PHYTOCHROME_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQTSVVKQLFEAVPHGRSQLYFKSSLTALSHAMEDQILAGQDSPLVIASFQQERYYRQ
CCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
EATRYRRIADKSQQVYVLAAPETEFENASDAYERIAFTPDDALSEEWHLVVIGENFASCL
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHH
LCREKHNNSEKGDHFADNARRFEGIWTEDRNITEKAAEILLDRIAQYRPELQEKVQAAKE
HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
TYLQNGHQDLTEHQPSSTADPFVQRLVNYLQAGQYKILKANRSLANKEQKERLINTVTAA
HHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHH
IRRSLDTEDILQLAVEKLGEGLGVCRCIIYRCKESDEQAQIQHEFLHGDQISVKGRNWPL
HHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCC
KDNPLFQKVVSLGEALGIDNTEQDPDFIKDQLETLTQTCSIVSWLLVPVLYQGRLIGMIE
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
LHHCHPEAIHWRQEDIALVGAIAIQVGVALIQAEAYNNLEELNEQLAALDRTRSNLVAIT
EECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEE
GHELRTPLSTIQVCLESLANEPDMPEELRQVMLDTALQDAERLRTLVQDFLTLSQLESGR
CHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VEWNIEPLMLYECVELAMSHVRAKRYQSGGQPLPQLINQVSPDLPLVQADGEWLVEVIAK
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHH
LLDNACKFSDAKQGQVAIAITAEDPHKLTVSIIDNGRGIEPKRLETVFDRFYQEEGALRR
HHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHH
SAGGTGLGLAICRQIVTAWGGAIWAESEGKNQGSQFSFTVPVFEEPSPPKTNQTSKTKTK
CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH
TKRSRRR
HHHHCCC
>Mature Secondary Structure 
SIQTSVVKQLFEAVPHGRSQLYFKSSLTALSHAMEDQILAGQDSPLVIASFQQERYYRQ
CCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
EATRYRRIADKSQQVYVLAAPETEFENASDAYERIAFTPDDALSEEWHLVVIGENFASCL
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHH
LCREKHNNSEKGDHFADNARRFEGIWTEDRNITEKAAEILLDRIAQYRPELQEKVQAAKE
HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
TYLQNGHQDLTEHQPSSTADPFVQRLVNYLQAGQYKILKANRSLANKEQKERLINTVTAA
HHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHH
IRRSLDTEDILQLAVEKLGEGLGVCRCIIYRCKESDEQAQIQHEFLHGDQISVKGRNWPL
HHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCC
KDNPLFQKVVSLGEALGIDNTEQDPDFIKDQLETLTQTCSIVSWLLVPVLYQGRLIGMIE
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
LHHCHPEAIHWRQEDIALVGAIAIQVGVALIQAEAYNNLEELNEQLAALDRTRSNLVAIT
EECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEE
GHELRTPLSTIQVCLESLANEPDMPEELRQVMLDTALQDAERLRTLVQDFLTLSQLESGR
CHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VEWNIEPLMLYECVELAMSHVRAKRYQSGGQPLPQLINQVSPDLPLVQADGEWLVEVIAK
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHH
LLDNACKFSDAKQGQVAIAITAEDPHKLTVSIIDNGRGIEPKRLETVFDRFYQEEGALRR
HHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHH
SAGGTGLGLAICRQIVTAWGGAIWAESEGKNQGSQFSFTVPVFEEPSPPKTNQTSKTKTK
CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH
TKRSRRR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9829949; 10878122; 11758928 [H]