Click here to switch to the map view.

The map label for this gene is dnaG [H]

Identifier: 170077959

GI number: 170077959

Start: 1399264

End: 1401198

Strand: Reverse

Name: dnaG [H]

Synonym: SYNPCC7002_A1345

Alternate gene names: 170077959

Gene position: 1401198-1399264 (Counterclockwise)

Preceding gene: 170077960

Following gene: 170077958

Centisome position: 46.58

GC content: 52.76

Gene sequence:

>1935_bases
ATGGCCTACCCCTCGATTCATCCTGAAACCATCGAAGAAATTCGCGCCAAGGTTGATATTGCGGAGGTGGTATCTGATTA
TGTGGTGCTTAAAAAGCGGGGCAAGGATTTACTGGGGCTTTGTCCATTCCATGATGAGAAGACCCCCAGTTTTACGGTGA
GTCCGACGAAGCAGTTCTATCACTGTTTTGGCTGTGGGGCAGGGGGCAATGCGATCAAGTTTTTGATGGAAATCAATAAG
TCTCCCTTTGCCCAGGTGGTGCTGGACTTGGCCCAACGGTATCAAGTCCCGGTCAAAACCCTCGAACCAGAACAGCACCA
AGAGATCCAGCGGGAACTGTCCCTCAAGGAGCAGCTCTACGAAATTGTGGCGATCGCCAATGATTTTTATCAATACTCCC
TGCGGCAACCGGAAGGGCAAACGGCCTTAGCTTATGTCCGCGAGCAACGGCGATTAACGGAAGCAACGATTCAAAACTTC
GGCCTGGGCTATGCGCCGGGGGGCTGGGATACCCTCTACCACTACCTTGTGGAACAAAAGCGCTATCCCATCGATTTGGT
CGAAAAAGCAGGCTTAATTAAACCACGCCAGTCGGGGAACGGCCATTATGATCAGTTCCGCGATCGCCTGATGATCCCGA
TCTACGATGTCCAGGGTCGGGCGATCGCCTTTGGTAGCCGTACCCTCACGAACGAAGAACCAAAATACCTCAACTCCCCA
GAAACGCCCTTATTTGACAAGAGCCGGACTTTATTTGCCCTCGACCAAGCAAAGGGGGCGATCGCCAAACAGGATGCTGC
CGTGGTCGTCGAAGGCTATTTCGATGCGATCGCCCTCCACGCAGCGGGTTTTGAAAATGCGGTGGCTTCCCTCGGCACTG
CCTTTACCCAGGGGCAGATTAAACAACTGCTGCGCTACACCGATTCCAAGCAAATTATTTTTAACTTTGACGCAGATAAG
GCGGGGATCAAAGCCACCCAACGTACCCTCACCGAAATTGGACCCCTAATTTACAGTGGCCAGGCCCAGGTGCGGATCCT
CAATCTCCCTGGGGGGAAGGATGCGGACGAGTTTTTGCAAACAGACCAAGGCCCGGCGCAGTATCAAACGGCCCTTACAA
CGGCGCCCCTCTGGCTCGATTGGCAACTGGAGCAAATTTTGCTGGGCCAAGACGTCACCCAAGCCGACCAATTCCAAGGG
GTGATTAAACAAATGATTCGCCTGATCGCCAAAATTGATCATCCGAGTTTTCGGAGCCACTACATCGCTAAAGCCAGTGA
ACTCATCAATCACGAAGATTCCCACTACAAAAAACAATTGGAAGCGACCCTCCTGACCCAGGTAAACCGTTTCCGCAAAG
CCCAAGCCCGGAATCCGACGGCGACCCCGGAGGTGCAACCAGAGGCGATCGCCATTTCCTCCCAAACCATTGCCCTCGCC
CAGGCCGAAGAATTGCTGCTACGGATCTATCTCCATAGTCCAGCCCAGCGTCACCCCATCGAAGCACGCCTCGCCGAAAA
GGAAGTGATGTTTAGCCTGTCCCACCACCGTTGGCTCTGGCAACAAATCCTTGAAACCCCCTTAGAAATTAAGCAAAACC
ATGTCCATAATCAATTATTGGGCCGGATGCTCGATATTTTGACCCACCACCCCGAACGGATGCATAGCCTCGGTTCTTTG
CTCTACCTCACCGAAACCACTGAAATCGATGTGCGTCGGGCCACCTTAAATATCCATGCGGCGATCGCCACCCTCGAACA
CGTCAACTGGACTCAGCATCGCCGTTATTGTCAAGAGAAATGGCAAGGTCTCGATCCCCAGCACCCAGATTTTGCCTATT
ATCTACGGGAATTTGAACAGGCCGACCGTAAACTGAAGGCGATCGCCCAGGAACGGCAATTTTCCCACCTGGAGATCCTC
CACTACGAAACATAA

Upstream 100 bases:

>100_bases
AAAGCCAAGGACAGATCAATTTATTGTTTGTAGCGGCGTCCCCGGAGATTTTCTTTTATCTTTAAGGATGCATTCTGTTT
AGATTTTTGCGACGTAATCC

Downstream 100 bases:

>100_bases
CTCGCCCCATTCCCACAATGGAAAGAACAGAAACTGATACCATGAGAGCTTGCAGATAGCCATGCTTTTATATCCTAAAT
TTTATGAGTACCCCATCCGG

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MAYPSIHPETIEEIRAKVDIAEVVSDYVVLKKRGKDLLGLCPFHDEKTPSFTVSPTKQFYHCFGCGAGGNAIKFLMEINK
SPFAQVVLDLAQRYQVPVKTLEPEQHQEIQRELSLKEQLYEIVAIANDFYQYSLRQPEGQTALAYVREQRRLTEATIQNF
GLGYAPGGWDTLYHYLVEQKRYPIDLVEKAGLIKPRQSGNGHYDQFRDRLMIPIYDVQGRAIAFGSRTLTNEEPKYLNSP
ETPLFDKSRTLFALDQAKGAIAKQDAAVVVEGYFDAIALHAAGFENAVASLGTAFTQGQIKQLLRYTDSKQIIFNFDADK
AGIKATQRTLTEIGPLIYSGQAQVRILNLPGGKDADEFLQTDQGPAQYQTALTTAPLWLDWQLEQILLGQDVTQADQFQG
VIKQMIRLIAKIDHPSFRSHYIAKASELINHEDSHYKKQLEATLLTQVNRFRKAQARNPTATPEVQPEAIAISSQTIALA
QAEELLLRIYLHSPAQRHPIEARLAEKEVMFSLSHHRWLWQQILETPLEIKQNHVHNQLLGRMLDILTHHPERMHSLGSL
LYLTETTEIDVRRATLNIHAAIATLEHVNWTQHRRYCQEKWQGLDPQHPDFAYYLREFEQADRKLKAIAQERQFSHLEIL
HYET

Sequences:

>Translated_644_residues
MAYPSIHPETIEEIRAKVDIAEVVSDYVVLKKRGKDLLGLCPFHDEKTPSFTVSPTKQFYHCFGCGAGGNAIKFLMEINK
SPFAQVVLDLAQRYQVPVKTLEPEQHQEIQRELSLKEQLYEIVAIANDFYQYSLRQPEGQTALAYVREQRRLTEATIQNF
GLGYAPGGWDTLYHYLVEQKRYPIDLVEKAGLIKPRQSGNGHYDQFRDRLMIPIYDVQGRAIAFGSRTLTNEEPKYLNSP
ETPLFDKSRTLFALDQAKGAIAKQDAAVVVEGYFDAIALHAAGFENAVASLGTAFTQGQIKQLLRYTDSKQIIFNFDADK
AGIKATQRTLTEIGPLIYSGQAQVRILNLPGGKDADEFLQTDQGPAQYQTALTTAPLWLDWQLEQILLGQDVTQADQFQG
VIKQMIRLIAKIDHPSFRSHYIAKASELINHEDSHYKKQLEATLLTQVNRFRKAQARNPTATPEVQPEAIAISSQTIALA
QAEELLLRIYLHSPAQRHPIEARLAEKEVMFSLSHHRWLWQQILETPLEIKQNHVHNQLLGRMLDILTHHPERMHSLGSL
LYLTETTEIDVRRATLNIHAAIATLEHVNWTQHRRYCQEKWQGLDPQHPDFAYYLREFEQADRKLKAIAQERQFSHLEIL
HYET
>Mature_643_residues
AYPSIHPETIEEIRAKVDIAEVVSDYVVLKKRGKDLLGLCPFHDEKTPSFTVSPTKQFYHCFGCGAGGNAIKFLMEINKS
PFAQVVLDLAQRYQVPVKTLEPEQHQEIQRELSLKEQLYEIVAIANDFYQYSLRQPEGQTALAYVREQRRLTEATIQNFG
LGYAPGGWDTLYHYLVEQKRYPIDLVEKAGLIKPRQSGNGHYDQFRDRLMIPIYDVQGRAIAFGSRTLTNEEPKYLNSPE
TPLFDKSRTLFALDQAKGAIAKQDAAVVVEGYFDAIALHAAGFENAVASLGTAFTQGQIKQLLRYTDSKQIIFNFDADKA
GIKATQRTLTEIGPLIYSGQAQVRILNLPGGKDADEFLQTDQGPAQYQTALTTAPLWLDWQLEQILLGQDVTQADQFQGV
IKQMIRLIAKIDHPSFRSHYIAKASELINHEDSHYKKQLEATLLTQVNRFRKAQARNPTATPEVQPEAIAISSQTIALAQ
AEELLLRIYLHSPAQRHPIEARLAEKEVMFSLSHHRWLWQQILETPLEIKQNHVHNQLLGRMLDILTHHPERMHSLGSLL
YLTETTEIDVRRATLNIHAAIATLEHVNWTQHRRYCQEKWQGLDPQHPDFAYYLREFEQADRKLKAIAQERQFSHLEILH
YET

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1789447, Length=352, Percent_Identity=41.4772727272727, Blast_Score=263, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013264
- InterPro:   IPR006295
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]

EC number: 2.7.7.-

Molecular weight: Translated: 73637; Mature: 73505

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYPSIHPETIEEIRAKVDIAEVVSDYVVLKKRGKDLLGLCPFHDEKTPSFTVSPTKQFY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEECCHHHHH
HCFGCGAGGNAIKFLMEINKSPFAQVVLDLAQRYQVPVKTLEPEQHQEIQRELSLKEQLY
HHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
EIVAIANDFYQYSLRQPEGQTALAYVREQRRLTEATIQNFGLGYAPGGWDTLYHYLVEQK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
RYPIDLVEKAGLIKPRQSGNGHYDQFRDRLMIPIYDVQGRAIAFGSRTLTNEEPKYLNSP
CCCHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCC
ETPLFDKSRTLFALDQAKGAIAKQDAAVVVEGYFDAIALHAAGFENAVASLGTAFTQGQI
CCCCCCCCCCEEEEHHHCCCHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KQLLRYTDSKQIIFNFDADKAGIKATQRTLTEIGPLIYSGQAQVRILNLPGGKDADEFLQ
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCHHHHHH
TDQGPAQYQTALTTAPLWLDWQLEQILLGQDVTQADQFQGVIKQMIRLIAKIDHPSFRSH
CCCCHHHHHHHHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
YIAKASELINHEDSHYKKQLEATLLTQVNRFRKAQARNPTATPEVQPEAIAISSQTIALA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHH
QAEELLLRIYLHSPAQRHPIEARLAEKEVMFSLSHHRWLWQQILETPLEIKQNHVHNQLL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GRMLDILTHHPERMHSLGSLLYLTETTEIDVRRATLNIHAAIATLEHVNWTQHRRYCQEK
HHHHHHHHCCHHHHHHHCCEEEEEECCCEEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHH
WQGLDPQHPDFAYYLREFEQADRKLKAIAQERQFSHLEILHYET
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure 
AYPSIHPETIEEIRAKVDIAEVVSDYVVLKKRGKDLLGLCPFHDEKTPSFTVSPTKQFY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEECCHHHHH
HCFGCGAGGNAIKFLMEINKSPFAQVVLDLAQRYQVPVKTLEPEQHQEIQRELSLKEQLY
HHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
EIVAIANDFYQYSLRQPEGQTALAYVREQRRLTEATIQNFGLGYAPGGWDTLYHYLVEQK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
RYPIDLVEKAGLIKPRQSGNGHYDQFRDRLMIPIYDVQGRAIAFGSRTLTNEEPKYLNSP
CCCHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCC
ETPLFDKSRTLFALDQAKGAIAKQDAAVVVEGYFDAIALHAAGFENAVASLGTAFTQGQI
CCCCCCCCCCEEEEHHHCCCHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KQLLRYTDSKQIIFNFDADKAGIKATQRTLTEIGPLIYSGQAQVRILNLPGGKDADEFLQ
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCHHHHHH
TDQGPAQYQTALTTAPLWLDWQLEQILLGQDVTQADQFQGVIKQMIRLIAKIDHPSFRSH
CCCCHHHHHHHHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
YIAKASELINHEDSHYKKQLEATLLTQVNRFRKAQARNPTATPEVQPEAIAISSQTIALA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHH
QAEELLLRIYLHSPAQRHPIEARLAEKEVMFSLSHHRWLWQQILETPLEIKQNHVHNQLL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GRMLDILTHHPERMHSLGSLLYLTETTEIDVRRATLNIHAAIATLEHVNWTQHRRYCQEK
HHHHHHHHCCHHHHHHHCCEEEEEECCCEEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHH
WQGLDPQHPDFAYYLREFEQADRKLKAIAQERQFSHLEILHYET
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]