Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077922

Identifier: 170077922

GI number: 170077922

Start: 1361361

End: 1362038

Strand: Direct

Name: 170077922

Synonym: SYNPCC7002_A1307

Alternate gene names: NA

Gene position: 1361361-1362038 (Clockwise)

Preceding gene: 170077921

Following gene: 170077926

Centisome position: 45.26

GC content: 50.74

Gene sequence:

>678_bases
GTGACTGTTTCCGCACACCCCTACATCCAACTGGATCAAGAACAGCTAACGCCGCCACCGCAGTCCACACTCTGCCACGG
GGTTTTATTTGTGTTGGATCATGATGACCTTTTGCAGCTCCTGGCGCTCAAAAACAAAGGGCAAACCCTAACGTTTACCG
ATGAGTTCAACCTCGCTTGGCGAAAATATGTGCTTTTTCGAGAAGGTGACTGGCCCCAGGCGTCCCTCTCTTTTCTGTTG
CGTTACGAAGGGATCAACGTTTTAAAGACCCAAATTGGACTTGATGGCGGTGTGTTGCACCAAGTGGTAGCGGATCTACT
GCCGTCGCCTTCCCTCTATCAACAGTTAGCAGAAATTCAAGGGTGGTTTATTGGGCAATTATTGACGCAATTACCCTGGC
GACAACGAAAATATGGTTTCAGTTGCCTGGCCTGGCCCTTGGCGATCGCCTTTGTATTAATCTCTGTGATCTTGGGTTGG
TCAACGCTGATGATGCAACCCTTACTATGGATTCTCGTTCCCATCGTCTTGGGCCTGCTCGGCTGGGGATTGCAGACCTT
ATTACGACAATGGCGATATCCCCTAAAACGCTGGTTGCTCTCCCAGGTACTTTATGGCCGCTTTGCCCAGTGCGATCGCC
TGAGAAACTGGGGACTCCGCTGGCTCCATTACCTTTGA

Upstream 100 bases:

>100_bases
GAGTTCACAAACGTCCAAAGCCCGACCAAGTCTCCCCAGAGCGTCCCTTGTTAAGCCCCAATAGTTTTCTCTGTCATTTA
CGCTTTTTGCCCTTTCTCCC

Downstream 100 bases:

>100_bases
GCGCTGATCAATTAACGCCAAAGCAAACTTGGGCCTAGGAGTTCATTGGCTCCGAGACCTGAGTTGTCTCCCCGTGGTTC
ACCCGCGACGGCAACTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAWRKYVLFREGDWPQASLSFLL
RYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQGWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGW
STLMMQPLLWILVPIVLGLLGWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL

Sequences:

>Translated_225_residues
MTVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAWRKYVLFREGDWPQASLSFLL
RYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQGWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGW
STLMMQPLLWILVPIVLGLLGWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL
>Mature_224_residues
TVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAWRKYVLFREGDWPQASLSFLLR
YEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQGWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGWS
TLMMQPLLWILVPIVLGLLGWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26138; Mature: 26007

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAW
CCCCCCCCEEECHHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHCCCCEEEEECCCCHHH
RKYVLFREGDWPQASLSFLLRYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQ
HHHHEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
GWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGWSTLMMQPLLWILVPIVLGLL
HHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAW
CCCCCCCEEECHHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHCCCCEEEEECCCCHHH
RKYVLFREGDWPQASLSFLLRYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQ
HHHHEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
GWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGWSTLMMQPLLWILVPIVLGLL
HHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA