| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077922
Identifier: 170077922
GI number: 170077922
Start: 1361361
End: 1362038
Strand: Direct
Name: 170077922
Synonym: SYNPCC7002_A1307
Alternate gene names: NA
Gene position: 1361361-1362038 (Clockwise)
Preceding gene: 170077921
Following gene: 170077926
Centisome position: 45.26
GC content: 50.74
Gene sequence:
>678_bases GTGACTGTTTCCGCACACCCCTACATCCAACTGGATCAAGAACAGCTAACGCCGCCACCGCAGTCCACACTCTGCCACGG GGTTTTATTTGTGTTGGATCATGATGACCTTTTGCAGCTCCTGGCGCTCAAAAACAAAGGGCAAACCCTAACGTTTACCG ATGAGTTCAACCTCGCTTGGCGAAAATATGTGCTTTTTCGAGAAGGTGACTGGCCCCAGGCGTCCCTCTCTTTTCTGTTG CGTTACGAAGGGATCAACGTTTTAAAGACCCAAATTGGACTTGATGGCGGTGTGTTGCACCAAGTGGTAGCGGATCTACT GCCGTCGCCTTCCCTCTATCAACAGTTAGCAGAAATTCAAGGGTGGTTTATTGGGCAATTATTGACGCAATTACCCTGGC GACAACGAAAATATGGTTTCAGTTGCCTGGCCTGGCCCTTGGCGATCGCCTTTGTATTAATCTCTGTGATCTTGGGTTGG TCAACGCTGATGATGCAACCCTTACTATGGATTCTCGTTCCCATCGTCTTGGGCCTGCTCGGCTGGGGATTGCAGACCTT ATTACGACAATGGCGATATCCCCTAAAACGCTGGTTGCTCTCCCAGGTACTTTATGGCCGCTTTGCCCAGTGCGATCGCC TGAGAAACTGGGGACTCCGCTGGCTCCATTACCTTTGA
Upstream 100 bases:
>100_bases GAGTTCACAAACGTCCAAAGCCCGACCAAGTCTCCCCAGAGCGTCCCTTGTTAAGCCCCAATAGTTTTCTCTGTCATTTA CGCTTTTTGCCCTTTCTCCC
Downstream 100 bases:
>100_bases GCGCTGATCAATTAACGCCAAAGCAAACTTGGGCCTAGGAGTTCATTGGCTCCGAGACCTGAGTTGTCTCCCCGTGGTTC ACCCGCGACGGCAACTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAWRKYVLFREGDWPQASLSFLL RYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQGWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGW STLMMQPLLWILVPIVLGLLGWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL
Sequences:
>Translated_225_residues MTVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAWRKYVLFREGDWPQASLSFLL RYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQGWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGW STLMMQPLLWILVPIVLGLLGWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL >Mature_224_residues TVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAWRKYVLFREGDWPQASLSFLLR YEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQGWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGWS TLMMQPLLWILVPIVLGLLGWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26138; Mature: 26007
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAW CCCCCCCCEEECHHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHCCCCEEEEECCCCHHH RKYVLFREGDWPQASLSFLLRYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQ HHHHEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH GWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGWSTLMMQPLLWILVPIVLGLL HHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVSAHPYIQLDQEQLTPPPQSTLCHGVLFVLDHDDLLQLLALKNKGQTLTFTDEFNLAW CCCCCCCEEECHHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHCCCCEEEEECCCCHHH RKYVLFREGDWPQASLSFLLRYEGINVLKTQIGLDGGVLHQVVADLLPSPSLYQQLAEIQ HHHHEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH GWFIGQLLTQLPWRQRKYGFSCLAWPLAIAFVLISVILGWSTLMMQPLLWILVPIVLGLL HHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWGLQTLLRQWRYPLKRWLLSQVLYGRFAQCDRLRNWGLRWLHYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA