| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is merA1 [H]
Identifier: 170077910
GI number: 170077910
Start: 1345683
End: 1347119
Strand: Reverse
Name: merA1 [H]
Synonym: SYNPCC7002_A1295
Alternate gene names: 170077910
Gene position: 1347119-1345683 (Counterclockwise)
Preceding gene: 170077911
Following gene: 170077907
Centisome position: 44.78
GC content: 52.61
Gene sequence:
>1437_bases GTGGCTGTGGATTACGATATTGTCATCATCGGCGGTGGTTCTGGAGGCCTCGTGGTGGCCAGTGCAGCGGCCCAGTTAAA GGCAAAGGTGGCCCTGGTCGAAAAGGATCGCCTTGGGGGAGATTGCCTCTGGTATGGTTGCGTTCCCAGTAAATCTTTTC TCCATGCGGCAAAAGTTGCCCACCAAGTGCGCCACGCAGGACGGGTCGGCGTTCATACAAAAGCGCCAGAAATTAATTTT TCAGAAGCAATGGGCCATGTACAAAAGGCGATCGCCACCATTGAACCCCATGATTCTCCAGAGCGATTTGAGGGGCTTGG GGTCGAGGTGATTTTTGGGGATGGTCAGTTTCTCGACGGCAAAACTTTTCTCGTCAATGGTCGCAAGCTAACGGCCCGCG CTTTTGTGATTGCCACCGGATCACGGCCTGCTGTTCCCCCCGTCGAAGGGCTCCAGGAAGCGGGTTTTATTACCAATGAA CAGGTGTTTTCCCTCACAGAGCAGCCAGAATCCCTCGCGGTGATTGGGTCGGGGCCGATTGGTTGTGAGTTGGGGCAAGC CTTCCACCGTTTGGGGACGGAAGTGACTCTGTTTGCGAGCCGCGATCGCCTTTTGCCCAAAGAAGACCCCGACGCCGCCG CTGTCCTGGAGCAACAATTTAACCAAGAAGGAATCACCATTCTGAAAAATGCCCGGTTAAAACGGGTAGCAGTGGTCAAG GGCAAAAAACACCTCTACACTGAGGATGATTCCCAGGTGGCGGCGATCGCCGATGAAATTCTCCTGGCCACGGGCCGCAC TCCCAATATCAAGTCCCTCAACCTAGAAGCCGCTGGAGTGGACTACGACAGTCAAGGCATCCATGTAAACGACAAACTCC AAACGACCAATGGTCGGATCTATGCTTGCGGCGATGTGATTGGGGGCTATCAGTTTACCCATGTGGCGGGTTACGAAGCC GTTGTGGTACTCCAAAATGCCCTGAATCCACTGCAATTATTTCTCAAAAGCGTCAATTATCGGGTGATTCCCTGGGCAAC CTTTACCGATCCGGAGGTGGCACGGGTTGGCATGACCGAGGAACAAGCCCGTAAACGTTACGGTGATGTGCTGATTTTGA AAGTGCCTTTCGCGTCAGTGGATCGGGCCCAGGCGGAGGATTCTACCGTGGGCTTTAATAAGTTGATTGTGCGTCATAAC GGCGAAATCCTAGGGGCGCATCTGGTAGGGCCAATGGCAGGGGAGCTGATCCATGAAATTGTTCTGGCGATGACCTATCG CTTACCGGTTTCGGCCTTAACGGGGATTCATGTTTACCCGACCCTGAGCGAAATTAATAGTAAAACGGCGCTGTTACTCT CCAAGAAAAAATACGCCGATAACGAAAAACTCCAAAATTTCTTGACCGAATTCTTTAAGTTTCTGCGCTCTTTGTAG
Upstream 100 bases:
>100_bases AGAGTTAAAAATTTCCTGAAAATCCCAACGTTAGCGATACAAAGGGGAAATTTTCGCGCAAAATAAAATCACTTGACTGC ACCAATGGAGAAACTTAACT
Downstream 100 bases:
>100_bases GCCGCCAAATCGCATCGGCAATTTTCGCCACATCGATCATTTCTGGGCCATCATGCACCCGGAGGATATCGGCCCCGAAG GCGATCGCCCCGGCACAGGC
Product: mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MAVDYDIVIIGGGSGGLVVASAAAQLKAKVALVEKDRLGGDCLWYGCVPSKSFLHAAKVAHQVRHAGRVGVHTKAPEINF SEAMGHVQKAIATIEPHDSPERFEGLGVEVIFGDGQFLDGKTFLVNGRKLTARAFVIATGSRPAVPPVEGLQEAGFITNE QVFSLTEQPESLAVIGSGPIGCELGQAFHRLGTEVTLFASRDRLLPKEDPDAAAVLEQQFNQEGITILKNARLKRVAVVK GKKHLYTEDDSQVAAIADEILLATGRTPNIKSLNLEAAGVDYDSQGIHVNDKLQTTNGRIYACGDVIGGYQFTHVAGYEA VVVLQNALNPLQLFLKSVNYRVIPWATFTDPEVARVGMTEEQARKRYGDVLILKVPFASVDRAQAEDSTVGFNKLIVRHN GEILGAHLVGPMAGELIHEIVLAMTYRLPVSALTGIHVYPTLSEINSKTALLLSKKKYADNEKLQNFLTEFFKFLRSL
Sequences:
>Translated_478_residues MAVDYDIVIIGGGSGGLVVASAAAQLKAKVALVEKDRLGGDCLWYGCVPSKSFLHAAKVAHQVRHAGRVGVHTKAPEINF SEAMGHVQKAIATIEPHDSPERFEGLGVEVIFGDGQFLDGKTFLVNGRKLTARAFVIATGSRPAVPPVEGLQEAGFITNE QVFSLTEQPESLAVIGSGPIGCELGQAFHRLGTEVTLFASRDRLLPKEDPDAAAVLEQQFNQEGITILKNARLKRVAVVK GKKHLYTEDDSQVAAIADEILLATGRTPNIKSLNLEAAGVDYDSQGIHVNDKLQTTNGRIYACGDVIGGYQFTHVAGYEA VVVLQNALNPLQLFLKSVNYRVIPWATFTDPEVARVGMTEEQARKRYGDVLILKVPFASVDRAQAEDSTVGFNKLIVRHN GEILGAHLVGPMAGELIHEIVLAMTYRLPVSALTGIHVYPTLSEINSKTALLLSKKKYADNEKLQNFLTEFFKFLRSL >Mature_477_residues AVDYDIVIIGGGSGGLVVASAAAQLKAKVALVEKDRLGGDCLWYGCVPSKSFLHAAKVAHQVRHAGRVGVHTKAPEINFS EAMGHVQKAIATIEPHDSPERFEGLGVEVIFGDGQFLDGKTFLVNGRKLTARAFVIATGSRPAVPPVEGLQEAGFITNEQ VFSLTEQPESLAVIGSGPIGCELGQAFHRLGTEVTLFASRDRLLPKEDPDAAAVLEQQFNQEGITILKNARLKRVAVVKG KKHLYTEDDSQVAAIADEILLATGRTPNIKSLNLEAAGVDYDSQGIHVNDKLQTTNGRIYACGDVIGGYQFTHVAGYEAV VVLQNALNPLQLFLKSVNYRVIPWATFTDPEVARVGMTEEQARKRYGDVLILKVPFASVDRAQAEDSTVGFNKLIVRHNG EILGAHLVGPMAGELIHEIVLAMTYRLPVSALTGIHVYPTLSEINSKTALLLSKKKYADNEKLQNFLTEFFKFLRSL
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=465, Percent_Identity=31.3978494623656, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI50301238, Length=464, Percent_Identity=29.3103448275862, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI22035672, Length=489, Percent_Identity=29.038854805726, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI291045266, Length=495, Percent_Identity=26.8686868686869, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI148277065, Length=494, Percent_Identity=25.7085020242915, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI33519430, Length=491, Percent_Identity=25.6619144602851, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI33519428, Length=491, Percent_Identity=25.6619144602851, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI33519426, Length=491, Percent_Identity=25.6619144602851, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI148277071, Length=480, Percent_Identity=25.625, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI291045268, Length=489, Percent_Identity=25.7668711656442, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1786307, Length=455, Percent_Identity=30.5494505494506, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI87081717, Length=452, Percent_Identity=30.7522123893805, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI87082354, Length=425, Percent_Identity=29.4117647058824, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1789915, Length=431, Percent_Identity=34.338747099768, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI32565766, Length=463, Percent_Identity=31.317494600432, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17557007, Length=471, Percent_Identity=26.963906581741, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71983419, Length=363, Percent_Identity=27.5482093663912, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71983429, Length=363, Percent_Identity=27.5482093663912, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71982272, Length=503, Percent_Identity=28.0318091451292, Blast_Score=105, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321091, Length=482, Percent_Identity=31.7427385892116, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6325166, Length=436, Percent_Identity=28.6697247706422, Blast_Score=145, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6325240, Length=464, Percent_Identity=24.3534482758621, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21358499, Length=470, Percent_Identity=31.4893617021277, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24640549, Length=477, Percent_Identity=29.3501048218029, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24640553, Length=477, Percent_Identity=29.3501048218029, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24640551, Length=479, Percent_Identity=29.2275574112735, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI17737741, Length=488, Percent_Identity=28.2786885245902, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 51818; Mature: 51687
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00076 PYRIDINE_REDOX_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDYDIVIIGGGSGGLVVASAAAQLKAKVALVEKDRLGGDCLWYGCVPSKSFLHAAKVA CCEEEEEEEEECCCCCEEEEEHHHHHEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHH HQVRHAGRVGVHTKAPEINFSEAMGHVQKAIATIEPHDSPERFEGLGVEVIFGDGQFLDG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCEEECC KTFLVNGRKLTARAFVIATGSRPAVPPVEGLQEAGFITNEQVFSLTEQPESLAVIGSGPI CEEEEECCEEEEEEEEEEECCCCCCCCHHHHHHCCCCCCHHHEEECCCCCEEEEEECCCC GCELGQAFHRLGTEVTLFASRDRLLPKEDPDAAAVLEQQFNQEGITILKNARLKRVAVVK CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEEEEEEEE GKKHLYTEDDSQVAAIADEILLATGRTPNIKSLNLEAAGVDYDSQGIHVNDKLQTTNGRI CCCEEECCCCCHHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCEEECCCEEECCCEE YACGDVIGGYQFTHVAGYEAVVVLQNALNPLQLFLKSVNYRVIPWATFTDPEVARVGMTE EEECCCCCCEEEEEECCCEEEEEEHHCCCHHHHHHHHCCEEEEEEEECCCCHHHCCCCCH EQARKRYGDVLILKVPFASVDRAQAEDSTVGFNKLIVRHNGEILGAHLVGPMAGELIHEI HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEHHCHHHHHHHHHH VLAMTYRLPVSALTGIHVYPTLSEINSKTALLLSKKKYADNEKLQNFLTEFFKFLRSL HHHHHHCCCHHHHCCEEEEEEHHHCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVDYDIVIIGGGSGGLVVASAAAQLKAKVALVEKDRLGGDCLWYGCVPSKSFLHAAKVA CEEEEEEEEECCCCCEEEEEHHHHHEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHH HQVRHAGRVGVHTKAPEINFSEAMGHVQKAIATIEPHDSPERFEGLGVEVIFGDGQFLDG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCEEECC KTFLVNGRKLTARAFVIATGSRPAVPPVEGLQEAGFITNEQVFSLTEQPESLAVIGSGPI CEEEEECCEEEEEEEEEEECCCCCCCCHHHHHHCCCCCCHHHEEECCCCCEEEEEECCCC GCELGQAFHRLGTEVTLFASRDRLLPKEDPDAAAVLEQQFNQEGITILKNARLKRVAVVK CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEEEEEEEE GKKHLYTEDDSQVAAIADEILLATGRTPNIKSLNLEAAGVDYDSQGIHVNDKLQTTNGRI CCCEEECCCCCHHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCEEECCCEEECCCEE YACGDVIGGYQFTHVAGYEAVVVLQNALNPLQLFLKSVNYRVIPWATFTDPEVARVGMTE EEECCCCCCEEEEEECCCEEEEEEHHCCCHHHHHHHHCCEEEEEEEECCCCHHHCCCCCH EQARKRYGDVLILKVPFASVDRAQAEDSTVGFNKLIVRHNGEILGAHLVGPMAGELIHEI HHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEHHCHHHHHHHHHH VLAMTYRLPVSALTGIHVYPTLSEINSKTALLLSKKKYADNEKLQNFLTEFFKFLRSL HHHHHHCCCHHHHCCEEEEEEHHHCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]