Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077887

Identifier: 170077887

GI number: 170077887

Start: 1318179

End: 1318607

Strand: Direct

Name: 170077887

Synonym: SYNPCC7002_A1272

Alternate gene names: NA

Gene position: 1318179-1318607 (Clockwise)

Preceding gene: 170077886

Following gene: 170077891

Centisome position: 43.82

GC content: 51.05

Gene sequence:

>429_bases
GTGTTCATGTACGGCTTCTCCCCTCCACAATCACCCCGGCAACAGACCCCCATTTCTCTCCAGAAACGTCGCCATAAGCA
AGATCAAAAAAGCGCTGGCCCATTAACAGCAGCAAATAAGCAGCATCGGTTCGCCTGCTGGGAATTGGCGGCGCAGATTT
CTGTAAATTGTCTCCTTGGTGGGGTGGCGATCGCCTCCATTGCCCAATTGTTACCGGCCCAACTATCCCAACAGCAGCAG
TTATCTGTTCTCAAGGGCGAAGTCACCGAAGCAGAACAACGGGTCGCCAAACTACGCCAAGAATTTAACCGTCACTTCGA
TGCCTACGGGAGCCATCGACTAATGCAAGAGTACACCATAAAAGTCGATCCCAAACAACAGCGCATTATCTGGGTAGATC
CGGCCCAGGCTCAAAATAGCGAAAATTAA

Upstream 100 bases:

>100_bases
ATTTTTTCTAAAAAGGCTTGTTATAAGCATTATCAATCAAAGAAAAATGCTTCGATAACTTCAGGTTACGCGATTTCTTG
TTTTTTTAGTGTTGGATCCT

Downstream 100 bases:

>100_bases
TTTTTCTAAGAGCTTGGCTATCAGCTAAGCATTTTCTCGAATTTTTTTAATGCTCTAAATCCGTAAACAAAAAAGGGAGT
CATTATGGCTCCCTTTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLGGVAIASIAQLLPAQLSQQQQ
LSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTIKVDPKQQRIIWVDPAQAQNSEN

Sequences:

>Translated_142_residues
MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLGGVAIASIAQLLPAQLSQQQQ
LSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTIKVDPKQQRIIWVDPAQAQNSEN
>Mature_142_residues
MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLGGVAIASIAQLLPAQLSQQQQ
LSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTIKVDPKQQRIIWVDPAQAQNSEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16126; Mature: 16126

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GVAIASIAQLLPAQLSQQQQLSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEE
KVDPKQQRIIWVDPAQAQNSEN
EECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MFMYGFSPPQSPRQQTPISLQKRRHKQDQKSAGPLTAANKQHRFACWELAAQISVNCLLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GVAIASIAQLLPAQLSQQQQLSVLKGEVTEAEQRVAKLRQEFNRHFDAYGSHRLMQEYTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEE
KVDPKQQRIIWVDPAQAQNSEN
EECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA