| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077881
Identifier: 170077881
GI number: 170077881
Start: 1310945
End: 1311538
Strand: Direct
Name: 170077881
Synonym: SYNPCC7002_A1265
Alternate gene names: NA
Gene position: 1310945-1311538 (Clockwise)
Preceding gene: 170077880
Following gene: 170077883
Centisome position: 43.58
GC content: 51.18
Gene sequence:
>594_bases ATGGATGAAACGTTACTACAGCAATTGGCCTGGATGGACTACCGTTTGGCGGTCATTTTTACGGTGATGGTGCCGATTGC ACTGTTGATCTGGAGTTTCGTCGCGAAGGTGGAATCGATGCAGCGGCTCCTGGGCATTTACTGGAAAGTGGCCAGCTTGT TAATGGTGACGGTGTATCTGTTGATTCCCAGTTGGTCAGTGGGCTATCTGACAGGGCTGTTGTCACGGATTTTGATTCCC ATTGGATTGTGGTTTTGGATTGATCTCAATGAAGAAATTCGCGATCAGCCGGGTAGTCGTCTAAAACTCGCGTTTACGGC TTGGCGTTGGGCGGTGACAGTTTACTGCGCGCTCGGGGCGATCGCCAACTTACCATTTTTGGGCTGTGCCTTTTCCACGG CGATGCGCCAAGGGGCCTATTGCCAAGTGTGGCTAGAAGCACCCAGCCGTTACCAACAAATTTTGCACGCCAACTCGACA CCCGGTTTTCTCGGCTTCTTAGGAATTGTCGGCCTGGTGATTTATGTCGTGTATTTGCTGACGTTTTTGGTGTTCCGTTT GGGACGTCAGGGCCGCATTGCCATCGAAGAATAA
Upstream 100 bases:
>100_bases CTAATCCCCAAAGCAGTGGTTTCTCTCCGTAGTGCCACTGCTTTGACTTGTGTATACTGTGAAAAATCAATCTTAATTTG TCTCAAACCCCACATAAACC
Downstream 100 bases:
>100_bases TGGAAAAAACCCCGTAAAAAACTTTTTTTGAGAAAAATCTAGGCTTAGGGGTTGCCAATTTAAAATTGCTTTGCTAAATT AGAACTTGTGCGCAAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MDETLLQQLAWMDYRLAVIFTVMVPIALLIWSFVAKVESMQRLLGIYWKVASLLMVTVYLLIPSWSVGYLTGLLSRILIP IGLWFWIDLNEEIRDQPGSRLKLAFTAWRWAVTVYCALGAIANLPFLGCAFSTAMRQGAYCQVWLEAPSRYQQILHANST PGFLGFLGIVGLVIYVVYLLTFLVFRLGRQGRIAIEE
Sequences:
>Translated_197_residues MDETLLQQLAWMDYRLAVIFTVMVPIALLIWSFVAKVESMQRLLGIYWKVASLLMVTVYLLIPSWSVGYLTGLLSRILIP IGLWFWIDLNEEIRDQPGSRLKLAFTAWRWAVTVYCALGAIANLPFLGCAFSTAMRQGAYCQVWLEAPSRYQQILHANST PGFLGFLGIVGLVIYVVYLLTFLVFRLGRQGRIAIEE >Mature_197_residues MDETLLQQLAWMDYRLAVIFTVMVPIALLIWSFVAKVESMQRLLGIYWKVASLLMVTVYLLIPSWSVGYLTGLLSRILIP IGLWFWIDLNEEIRDQPGSRLKLAFTAWRWAVTVYCALGAIANLPFLGCAFSTAMRQGAYCQVWLEAPSRYQQILHANST PGFLGFLGIVGLVIYVVYLLTFLVFRLGRQGRIAIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22415; Mature: 22415
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDETLLQQLAWMDYRLAVIFTVMVPIALLIWSFVAKVESMQRLLGIYWKVASLLMVTVYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPSWSVGYLTGLLSRILIPIGLWFWIDLNEEIRDQPGSRLKLAFTAWRWAVTVYCALGA HHCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH IANLPFLGCAFSTAMRQGAYCQVWLEAPSRYQQILHANSTPGFLGFLGIVGLVIYVVYLL HHCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TFLVFRLGRQGRIAIEE HHHHHHCCCCCCEEECC >Mature Secondary Structure MDETLLQQLAWMDYRLAVIFTVMVPIALLIWSFVAKVESMQRLLGIYWKVASLLMVTVYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPSWSVGYLTGLLSRILIPIGLWFWIDLNEEIRDQPGSRLKLAFTAWRWAVTVYCALGA HHCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH IANLPFLGCAFSTAMRQGAYCQVWLEAPSRYQQILHANSTPGFLGFLGIVGLVIYVVYLL HHCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TFLVFRLGRQGRIAIEE HHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA