| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077878
Identifier: 170077878
GI number: 170077878
Start: 1307835
End: 1308998
Strand: Direct
Name: 170077878
Synonym: SYNPCC7002_A1262
Alternate gene names: NA
Gene position: 1307835-1308998 (Clockwise)
Preceding gene: 170077876
Following gene: 170077880
Centisome position: 43.48
GC content: 56.1
Gene sequence:
>1164_bases GTGATCGCCTTTGAAGCCCGTCATCGGCAAGGAAATTCCCCCCAGGCGATCGCGCTCCAGGCCCCATCCAACTCCCCAAG GACAAATCGCCGTTCCCGCCGCCCAGTCCGCCAAGCACGCCTCAAACTACCCCGGCCCCTCCTGTATCCTCTCCGTTTAC TCATCGTGGGTGTGGGCGTTAGTGCTTGTATTGGCACCATTCTCAGCGCCGCAAACCTACGCTCCGTCCCCACGGTTACT CCCCCCGACAACGTAACGAGCCAACAGCTCCTCTCTGAACAGGTTACTCCTCCCCCGGCCCCGGAACCGCTTCCCCTGAA AACGCCCCTCACCCAACTGGCAGAAACCACCCAAGCGGCGATCGCCGCTGACTCTACCCTGGATGCGTCTTTGCTCTTTG TGGATTTAGACACCGGAGAATATTTAGATGTGGCTGGCGATCGTCCCCTCTCCGCCGCCAGTACGATCAAAATTCCCATT CTTGTGGCCTTCTTTGAAGCCGTTGACAGTGGCAAAGTCAACCTCGATGATTCACTCACCCTCACTCAAGAGGTCATCGG GGGTGGATCTGGCGGCATGCAATACAAAACCCCAGGCAGCACCTACACCGCCCTCTACACCGCCACGGAAATGAGCGTTA ACAGTGACAACACCGCCACCAACATGATCACCGAATTGTTGGGGGGGAATGCCGTCCTCAACGCCAAATTTCAGCAGTGG GGCATGACCCAAACCCAATTAAACAATCCCCTGCCGGATCTCGAAGGCACAAACCTCACCAGCGCTAAGGATCTTGCCCA TCTCCTGGCCCGCGTTAACCAAGGCGAAATCTTGTCTGTCCGCTCCCGCGATCGCCTGTTTCGGATCATGGGAGACACGA GTAATGATCGCCTTTTACCCCAGAGTTTGGGCCAGGGAGCCGACATCGTCCATAAAACCGGAGACATCGGCAGTATCATC GGCGATGCGGGAATTGTTGATCTGCCCAATGGCAAGCGTTACGTTGCTGCAATTTTTGTCGAGCGTCCCTACAACGACCC CAAGGGTAAAGAACTACTCCACAAAATTAGTCGTCAATTCTATGACCACATGGCTAAAAAAGAGATTATCCAAGCGCCTA GCCAACCAGCCGCCCCAGAGACAGCCCCAGCCCCAACGCCTTAA
Upstream 100 bases:
>100_bases AAAGTCAAGGTAGGAGTCGTCAGTGGTTGGTAAGTCCCGTCGTTCTAAACGCAGAAAATCCCCAGCGCCACGATCATTGA ATGCTGCGACCAATACTAAG
Downstream 100 bases:
>100_bases CTGCGGATCTGCACGGGCATAATCAAATAAGTCATTTGCACTGCACCCAGGGGCGTAAAAATGACTGGCTGGTTATTCTC ATTCAACTGCATCTTGATCT
Product: beta-lactamase, putative
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Class A; Beta-Lactamase Family Protein; Beta-Lactamase Protein; Carboxylesterase; Carboxylesterase Beta-Lactamase Family Protein; Beta-Lactamase Class A-Like Protein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MIAFEARHRQGNSPQAIALQAPSNSPRTNRRSRRPVRQARLKLPRPLLYPLRLLIVGVGVSACIGTILSAANLRSVPTVT PPDNVTSQQLLSEQVTPPPAPEPLPLKTPLTQLAETTQAAIAADSTLDASLLFVDLDTGEYLDVAGDRPLSAASTIKIPI LVAFFEAVDSGKVNLDDSLTLTQEVIGGGSGGMQYKTPGSTYTALYTATEMSVNSDNTATNMITELLGGNAVLNAKFQQW GMTQTQLNNPLPDLEGTNLTSAKDLAHLLARVNQGEILSVRSRDRLFRIMGDTSNDRLLPQSLGQGADIVHKTGDIGSII GDAGIVDLPNGKRYVAAIFVERPYNDPKGKELLHKISRQFYDHMAKKEIIQAPSQPAAPETAPAPTP
Sequences:
>Translated_387_residues MIAFEARHRQGNSPQAIALQAPSNSPRTNRRSRRPVRQARLKLPRPLLYPLRLLIVGVGVSACIGTILSAANLRSVPTVT PPDNVTSQQLLSEQVTPPPAPEPLPLKTPLTQLAETTQAAIAADSTLDASLLFVDLDTGEYLDVAGDRPLSAASTIKIPI LVAFFEAVDSGKVNLDDSLTLTQEVIGGGSGGMQYKTPGSTYTALYTATEMSVNSDNTATNMITELLGGNAVLNAKFQQW GMTQTQLNNPLPDLEGTNLTSAKDLAHLLARVNQGEILSVRSRDRLFRIMGDTSNDRLLPQSLGQGADIVHKTGDIGSII GDAGIVDLPNGKRYVAAIFVERPYNDPKGKELLHKISRQFYDHMAKKEIIQAPSQPAAPETAPAPTP >Mature_387_residues MIAFEARHRQGNSPQAIALQAPSNSPRTNRRSRRPVRQARLKLPRPLLYPLRLLIVGVGVSACIGTILSAANLRSVPTVT PPDNVTSQQLLSEQVTPPPAPEPLPLKTPLTQLAETTQAAIAADSTLDASLLFVDLDTGEYLDVAGDRPLSAASTIKIPI LVAFFEAVDSGKVNLDDSLTLTQEVIGGGSGGMQYKTPGSTYTALYTATEMSVNSDNTATNMITELLGGNAVLNAKFQQW GMTQTQLNNPLPDLEGTNLTSAKDLAHLLARVNQGEILSVRSRDRLFRIMGDTSNDRLLPQSLGQGADIVHKTGDIGSII GDAGIVDLPNGKRYVAAIFVERPYNDPKGKELLHKISRQFYDHMAKKEIIQAPSQPAAPETAPAPTP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 41507; Mature: 41507
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAFEARHRQGNSPQAIALQAPSNSPRTNRRSRRPVRQARLKLPRPLLYPLRLLIVGVGV CCCCCCHHCCCCCCCEEEEECCCCCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHHHHCCH SACIGTILSAANLRSVPTVTPPDNVTSQQLLSEQVTPPPAPEPLPLKTPLTQLAETTQAA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH IAADSTLDASLLFVDLDTGEYLDVAGDRPLSAASTIKIPILVAFFEAVDSGKVNLDDSLT HHCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHH LTQEVIGGGSGGMQYKTPGSTYTALYTATEMSVNSDNTATNMITELLGGNAVLNAKFQQW HHHHHHCCCCCCCEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHH GMTQTQLNNPLPDLEGTNLTSAKDLAHLLARVNQGEILSVRSRDRLFRIMGDTSNDRLLP CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCH QSLGQGADIVHKTGDIGSIIGDAGIVDLPNGKRYVAAIFVERPYNDPKGKELLHKISRQF HHHCCCCCEEECCCCHHHHHCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH YDHMAKKEIIQAPSQPAAPETAPAPTP HHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIAFEARHRQGNSPQAIALQAPSNSPRTNRRSRRPVRQARLKLPRPLLYPLRLLIVGVGV CCCCCCHHCCCCCCCEEEEECCCCCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHHHHCCH SACIGTILSAANLRSVPTVTPPDNVTSQQLLSEQVTPPPAPEPLPLKTPLTQLAETTQAA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH IAADSTLDASLLFVDLDTGEYLDVAGDRPLSAASTIKIPILVAFFEAVDSGKVNLDDSLT HHCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHH LTQEVIGGGSGGMQYKTPGSTYTALYTATEMSVNSDNTATNMITELLGGNAVLNAKFQQW HHHHHHCCCCCCCEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHH GMTQTQLNNPLPDLEGTNLTSAKDLAHLLARVNQGEILSVRSRDRLFRIMGDTSNDRLLP CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCH QSLGQGADIVHKTGDIGSIIGDAGIVDLPNGKRYVAAIFVERPYNDPKGKELLHKISRQF HHHCCCCCEEECCCCHHHHHCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH YDHMAKKEIIQAPSQPAAPETAPAPTP HHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA