| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077876
Identifier: 170077876
GI number: 170077876
Start: 1303235
End: 1303546
Strand: Direct
Name: 170077876
Synonym: SYNPCC7002_A1260
Alternate gene names: NA
Gene position: 1303235-1303546 (Clockwise)
Preceding gene: 170077875
Following gene: 170077878
Centisome position: 43.32
GC content: 48.08
Gene sequence:
>312_bases ATGTTGGAGTTTTCACAATTTGAGGCGGGCTATATTATTTCCCAAAAAGACCTGGAACAGGCAGTGGGCTATCGGCAACG GGATCAGCCAGGGGCCTTTGACTATTTTTTAGCGGATGTCTATGGCCTTGTATTGCAAGCCCTGGAGGAATGTTTACCCC ATTTAAAGGTTTATCCGGCGTTAAATTTCCATGGGTTGATTATCCTCGATCCAACCCAGATGACCCCAGAGGAAACGAAG CTCTACCATAGCCGCCGCGATCGCCTTTTGAGAAAGCAAGCTGAGCAAGATATTCGCCGCTCAGAACTCTGA
Upstream 100 bases:
>100_bases CAAGCGGTATAAATATCTCTTTAAATACCGAATGGCTCCCCCTCCTTGGGGGAGTTTTTGTTTTATGTTTTTCCTTGGAT CAATTTAAGTATGGGCAGCG
Downstream 100 bases:
>100_bases GATCAAGGGTTGTTCGGCCATCAGTCGGGGGATTCGAGGTAGGTCTGGATAAACTGGTGGGCTGCCTGGAAATGGGTTTC GATCTGCTGGGAAAGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MLEFSQFEAGYIISQKDLEQAVGYRQRDQPGAFDYFLADVYGLVLQALEECLPHLKVYPALNFHGLIILDPTQMTPEETK LYHSRRDRLLRKQAEQDIRRSEL
Sequences:
>Translated_103_residues MLEFSQFEAGYIISQKDLEQAVGYRQRDQPGAFDYFLADVYGLVLQALEECLPHLKVYPALNFHGLIILDPTQMTPEETK LYHSRRDRLLRKQAEQDIRRSEL >Mature_103_residues MLEFSQFEAGYIISQKDLEQAVGYRQRDQPGAFDYFLADVYGLVLQALEECLPHLKVYPALNFHGLIILDPTQMTPEETK LYHSRRDRLLRKQAEQDIRRSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12087; Mature: 12087
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFSQFEAGYIISQKDLEQAVGYRQRDQPGAFDYFLADVYGLVLQALEECLPHLKVYPA CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC LNFHGLIILDPTQMTPEETKLYHSRRDRLLRKQAEQDIRRSEL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLEFSQFEAGYIISQKDLEQAVGYRQRDQPGAFDYFLADVYGLVLQALEECLPHLKVYPA CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC LNFHGLIILDPTQMTPEETKLYHSRRDRLLRKQAEQDIRRSEL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA