| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is txlA [H]
Identifier: 170077860
GI number: 170077860
Start: 1284094
End: 1284651
Strand: Reverse
Name: txlA [H]
Synonym: SYNPCC7002_A1244
Alternate gene names: 170077860
Gene position: 1284651-1284094 (Counterclockwise)
Preceding gene: 170077865
Following gene: 170077859
Centisome position: 42.71
GC content: 55.02
Gene sequence:
>558_bases ATGACTGACACAAATTCTGGACAAAATAAACTCAAAGGTCTCGTAATTGGTTTGGTGGCGATCGCCCTGGCGGTATCCCT CGCCCTGGGGATCAAATTCCAGCCCCCTGCCGCTACCCTCGAAGCCCAAGCGGCCGAAGCCGTACCCCTCGCCGTTGCCC TCGACAATGGTCGCCCGACTTTGATGGAATTTTATGCGGATTGGTGTACCAGTTGTCAGGCCATGGCCCCGGATCTCCGG CAAATCAAACAAACCTACGGCGATCGCCTTAATTTTGTGATGCTCAATGTGGATAACGGCAAATGGCTCCCGGAAGTGCT GAAATATCGCGTTGATGGGATTCCCCACTTTGTTTTCTTAGATGAAGCCGGCCAGGCGATCGCCGAAACCATTGGCGAAC AACCCCGCAGCATCCTTGAAGCCGACCTCAATGCCCTCCTCGCCCACAACGACTTACCCTACACCTACGACCAAGGCCAA GTTTCTAAACTCGATCGCCCCAATCAACAACCCCGCCAGAGTGATCCCCGTAGCCACGGCGCCCAGGTCAAATCCTAG
Upstream 100 bases:
>100_bases TTTGGGTTAAAAACTCAGGCTTCTTACTTTATCGGATTTTTCTGACGGAACGCGCCCTTTACAATACTTATAAGTTTTAC TTGGAATCTGGCCCTTAGCT
Downstream 100 bases:
>100_bases GTTTTGGGCGAAAAACTTGCCTCACAAATTTTCCCAGAAAGGTTGGCTATAATTGAAGCCAATTTTAAGGCCCTGGCCCG TTCGTGCTGGTGCCTCAGAT
Product: thioredoxin-like protein txlA like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTDTNSGQNKLKGLVIGLVAIALAVSLALGIKFQPPAATLEAQAAEAVPLAVALDNGRPTLMEFYADWCTSCQAMAPDLR QIKQTYGDRLNFVMLNVDNGKWLPEVLKYRVDGIPHFVFLDEAGQAIAETIGEQPRSILEADLNALLAHNDLPYTYDQGQ VSKLDRPNQQPRQSDPRSHGAQVKS
Sequences:
>Translated_185_residues MTDTNSGQNKLKGLVIGLVAIALAVSLALGIKFQPPAATLEAQAAEAVPLAVALDNGRPTLMEFYADWCTSCQAMAPDLR QIKQTYGDRLNFVMLNVDNGKWLPEVLKYRVDGIPHFVFLDEAGQAIAETIGEQPRSILEADLNALLAHNDLPYTYDQGQ VSKLDRPNQQPRQSDPRSHGAQVKS >Mature_184_residues TDTNSGQNKLKGLVIGLVAIALAVSLALGIKFQPPAATLEAQAAEAVPLAVALDNGRPTLMEFYADWCTSCQAMAPDLRQ IKQTYGDRLNFVMLNVDNGKWLPEVLKYRVDGIPHFVFLDEAGQAIAETIGEQPRSILEADLNALLAHNDLPYTYDQGQV SKLDRPNQQPRQSDPRSHGAQVKS
Specific function: Required for disulfide bond formation in some proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 20213; Mature: 20082
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTNSGQNKLKGLVIGLVAIALAVSLALGIKFQPPAATLEAQAAEAVPLAVALDNGRPT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCHH LMEFYADWCTSCQAMAPDLRQIKQTYGDRLNFVMLNVDNGKWLPEVLKYRVDGIPHFVFL HHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEE DEAGQAIAETIGEQPRSILEADLNALLAHNDLPYTYDQGQVSKLDRPNQQPRQSDPRSHG CHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEECCCCHHHCCCCCCCCCCCCCHHCC AQVKS CCCCC >Mature Secondary Structure TDTNSGQNKLKGLVIGLVAIALAVSLALGIKFQPPAATLEAQAAEAVPLAVALDNGRPT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCHH LMEFYADWCTSCQAMAPDLRQIKQTYGDRLNFVMLNVDNGKWLPEVLKYRVDGIPHFVFL HHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEE DEAGQAIAETIGEQPRSILEADLNALLAHNDLPYTYDQGQVSKLDRPNQQPRQSDPRSHG CHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEECCCCHHHCCCCCCCCCCCCCHHCC AQVKS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]