Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077856

Identifier: 170077856

GI number: 170077856

Start: 1281786

End: 1282166

Strand: Direct

Name: 170077856

Synonym: SYNPCC7002_A1240

Alternate gene names: NA

Gene position: 1281786-1282166 (Clockwise)

Preceding gene: 170077854

Following gene: 170077857

Centisome position: 42.61

GC content: 52.23

Gene sequence:

>381_bases
ATGGCAGGCTTCAGTGATTTAGTACAAAAAGCTTTTTACCTTGGGGTCGGGGCCGCTTCCCTCGCTGCCGAAAAAGCAGG
GGCAACGATCCATGATCTGCGCGAACAGGCCCAGGTCATCGCCGATGAAATGGTACAAAAAGGGGAGATGAACGCCGAAG
AGGCCAAAAAATTTGTCAATGAAATGGTCAAGCAGGCCCAACAGCGGGTGCCTCAAAGCCCAGAAACGACAACAAGCTCC
AACAGCGAGACCAAAGAGCCGCGCCGCATTGAAATCCTTGACGATGACGAACCTGAAAACACCGACGCCATGGACGAAGC
GGAACGGCTCCGGCGGGAAGTAGAATCTCTCCAAGCAGAGCTGAATAATTTGAAACGATAA

Upstream 100 bases:

>100_bases
TTGCTCTTCGCTATGGGGACAGGTGATCGCCCCCAGCCCAAGCCTCAAATTTATCGACTATGCTTAAAACAGCACGCTTG
ATGACAAAGGACTTTAGACT

Downstream 100 bases:

>100_bases
ACGTAGCTGTTTTGGAAATGGATGACTGGAAATAACGATGTCTGATGCTTCTTTATCACCCCAAACCCCGGAAGTTTACA
CAGGTTACTATGGCGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAGFSDLVQKAFYLGVGAASLAAEKAGATIHDLREQAQVIADEMVQKGEMNAEEAKKFVNEMVKQAQQRVPQSPETTTSS
NSETKEPRRIEILDDDEPENTDAMDEAERLRREVESLQAELNNLKR

Sequences:

>Translated_126_residues
MAGFSDLVQKAFYLGVGAASLAAEKAGATIHDLREQAQVIADEMVQKGEMNAEEAKKFVNEMVKQAQQRVPQSPETTTSS
NSETKEPRRIEILDDDEPENTDAMDEAERLRREVESLQAELNNLKR
>Mature_125_residues
AGFSDLVQKAFYLGVGAASLAAEKAGATIHDLREQAQVIADEMVQKGEMNAEEAKKFVNEMVKQAQQRVPQSPETTTSSN
SETKEPRRIEILDDDEPENTDAMDEAERLRREVESLQAELNNLKR

Specific function: Unknown

COG id: COG3937

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14065; Mature: 13934

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFSDLVQKAFYLGVGAASLAAEKAGATIHDLREQAQVIADEMVQKGEMNAEEAKKFVN
CCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EMVKQAQQRVPQSPETTTSSNSETKEPRRIEILDDDEPENTDAMDEAERLRREVESLQAE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LNNLKR
HHHCCC
>Mature Secondary Structure 
AGFSDLVQKAFYLGVGAASLAAEKAGATIHDLREQAQVIADEMVQKGEMNAEEAKKFVN
CCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EMVKQAQQRVPQSPETTTSSNSETKEPRRIEILDDDEPENTDAMDEAERLRREVESLQAE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LNNLKR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA