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The map label for this gene is selU [H]

Identifier: 170077854

GI number: 170077854

Start: 1280213

End: 1281274

Strand: Direct

Name: selU [H]

Synonym: SYNPCC7002_A1238

Alternate gene names: 170077854

Gene position: 1280213-1281274 (Clockwise)

Preceding gene: 170077853

Following gene: 170077856

Centisome position: 42.56

GC content: 52.07

Gene sequence:

>1062_bases
ATGGCTCCTCCGATTCACAGCACGACAAATCCTTGGGATCAGAATTTTCAACCCTACACAGACATTATCGATGTGCGATC
GCCAGCGGAATTTGCCGAGGATCATATTCCCGGTGCCGTCAACTTTCCGGTACTCAGCAACGAAGAGCGGGCCTTGGTGG
GCACCATCTACACCCAGCGATCGCCCTTTGAAGCCCGTAAAATTGGGGCCGCCCTCGTATCTAAAAATATTGGCCATCAT
TTAGAAACGCATTTTTTAGAAAGACCCAAGGAATTCCACCCCCTTATTTACTGTTGGCGGGGCGGCCAGCGTTCCCACAG
TTTCGCGACGGTACTCAGCCAAATCGGTTGGCAGACAACTCTCTTGACCGGGGGCTACAAAACCTATCGCCAGTATGTGC
GCCAAGCCCTCTCCCATCTCGGAACGACCCTGTCTTTGCGGGTACTCTGCGGCTATACAGGCAGCGCCAAAACCAAATTA
CTCCAAGCATTGCAGGCAGCACAGTTTCAGGTTTTAGATTTAGAAGCCCTCGCCGCCCACCGGGGATCTCTGTTAGGACA
AATGTGGCAAGAAACGCCCCAGCAACAGCCTGCGCAAAAGTGGTTTGAGTCGCAACTGGTGGCCCAGCTCCAAGCCTTTG
ATCCCAGGCGACCGATTTGGGTGGAGTCAGAAAGTAAGACCATTGGCAAAATCCATGTGCCGAAACCCCTCTGGGAAAAT
ATGCGGCGATCGCCTGTGGTGGAAGTGGTTTTACCGATGGCCGAACGGGTCAAGCTACTCATCGCGGAATATCCCCACCT
CATCGAACATCCAGCGACCCTGAAACAATTGCTCAGTCAGCTCGTACCCAAATATGGCAAGGGCAAAATCCAAGCCTGGT
ACAACTTAATTGATGCTCAACAATGGCCAGAATTTGTTGAGGCGATCCTCGAAGCGCATTATGATCCCACCTATCGGCGA
TCGCTACCCCGCCATTTTCGCCAACCCCAACAAACCATTCACCTCAATGGGTTAAACGCCGCTGACATTCAAAGCTTTAT
CAAGACTCTTGGCTCAAGGTAA

Upstream 100 bases:

>100_bases
TCTCCCTAGACTTGTGCTAAAACCTAAACCCCCAAGGCAGCCCCGTGGCTGTCTTTTTGTTATGGTGAAGGCTTGATTCA
CAACGTAAAGTTAGGTGGCG

Downstream 100 bases:

>100_bases
TAGAGATTTAATACAGCTAATAAAAATCCCCTGCTGCGGGGATTTGTCACATTTCAAAACGATCTAGATCAAGTCCCAAA
AATTAGGGAGTACGCTGTAA

Product: tRNA 2-selenouridine synthase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MAPPIHSTTNPWDQNFQPYTDIIDVRSPAEFAEDHIPGAVNFPVLSNEERALVGTIYTQRSPFEARKIGAALVSKNIGHH
LETHFLERPKEFHPLIYCWRGGQRSHSFATVLSQIGWQTTLLTGGYKTYRQYVRQALSHLGTTLSLRVLCGYTGSAKTKL
LQALQAAQFQVLDLEALAAHRGSLLGQMWQETPQQQPAQKWFESQLVAQLQAFDPRRPIWVESESKTIGKIHVPKPLWEN
MRRSPVVEVVLPMAERVKLLIAEYPHLIEHPATLKQLLSQLVPKYGKGKIQAWYNLIDAQQWPEFVEAILEAHYDPTYRR
SLPRHFRQPQQTIHLNGLNAADIQSFIKTLGSR

Sequences:

>Translated_353_residues
MAPPIHSTTNPWDQNFQPYTDIIDVRSPAEFAEDHIPGAVNFPVLSNEERALVGTIYTQRSPFEARKIGAALVSKNIGHH
LETHFLERPKEFHPLIYCWRGGQRSHSFATVLSQIGWQTTLLTGGYKTYRQYVRQALSHLGTTLSLRVLCGYTGSAKTKL
LQALQAAQFQVLDLEALAAHRGSLLGQMWQETPQQQPAQKWFESQLVAQLQAFDPRRPIWVESESKTIGKIHVPKPLWEN
MRRSPVVEVVLPMAERVKLLIAEYPHLIEHPATLKQLLSQLVPKYGKGKIQAWYNLIDAQQWPEFVEAILEAHYDPTYRR
SLPRHFRQPQQTIHLNGLNAADIQSFIKTLGSR
>Mature_352_residues
APPIHSTTNPWDQNFQPYTDIIDVRSPAEFAEDHIPGAVNFPVLSNEERALVGTIYTQRSPFEARKIGAALVSKNIGHHL
ETHFLERPKEFHPLIYCWRGGQRSHSFATVLSQIGWQTTLLTGGYKTYRQYVRQALSHLGTTLSLRVLCGYTGSAKTKLL
QALQAAQFQVLDLEALAAHRGSLLGQMWQETPQQQPAQKWFESQLVAQLQAFDPRRPIWVESESKTIGKIHVPKPLWENM
RRSPVVEVVLPMAERVKLLIAEYPHLIEHPATLKQLLSQLVPKYGKGKIQAWYNLIDAQQWPEFVEAILEAHYDPTYRRS
LPRHFRQPQQTIHLNGLNAADIQSFIKTLGSR

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=338, Percent_Identity=33.1360946745562, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 40301; Mature: 40169

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPIHSTTNPWDQNFQPYTDIIDVRSPAEFAEDHIPGAVNFPVLSNEERALVGTIYTQR
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCEECCCCCEEEEEHHHCC
SPFEARKIGAALVSKNIGHHLETHFLERPKEFHPLIYCWRGGQRSHSFATVLSQIGWQTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHE
LLTGGYKTYRQYVRQALSHLGTTLSLRVLCGYTGSAKTKLLQALQAAQFQVLDLEALAAH
EECCCHHHHHHHHHHHHHHHCCHHEEHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGSLLGQMWQETPQQQPAQKWFESQLVAQLQAFDPRRPIWVESESKTIGKIHVPKPLWEN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCHHHHH
MRRSPVVEVVLPMAERVKLLIAEYPHLIEHPATLKQLLSQLVPKYGKGKIQAWYNLIDAQ
HHHCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QWPEFVEAILEAHYDPTYRRSLPRHFRQPQQTIHLNGLNAADIQSFIKTLGSR
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
APPIHSTTNPWDQNFQPYTDIIDVRSPAEFAEDHIPGAVNFPVLSNEERALVGTIYTQR
CCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCEECCCCCEEEEEHHHCC
SPFEARKIGAALVSKNIGHHLETHFLERPKEFHPLIYCWRGGQRSHSFATVLSQIGWQTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHE
LLTGGYKTYRQYVRQALSHLGTTLSLRVLCGYTGSAKTKLLQALQAAQFQVLDLEALAAH
EECCCHHHHHHHHHHHHHHHCCHHEEHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGSLLGQMWQETPQQQPAQKWFESQLVAQLQAFDPRRPIWVESESKTIGKIHVPKPLWEN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCHHHHH
MRRSPVVEVVLPMAERVKLLIAEYPHLIEHPATLKQLLSQLVPKYGKGKIQAWYNLIDAQ
HHHCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QWPEFVEAILEAHYDPTYRRSLPRHFRQPQQTIHLNGLNAADIQSFIKTLGSR
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]