Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is ppa [H]

Identifier: 170077844

GI number: 170077844

Start: 1272528

End: 1273037

Strand: Direct

Name: ppa [H]

Synonym: SYNPCC7002_A1228

Alternate gene names: 170077844

Gene position: 1272528-1273037 (Clockwise)

Preceding gene: 170077843

Following gene: 170077846

Centisome position: 42.3

GC content: 49.22

Gene sequence:

>510_bases
GTGGATTTATCTCGGATTCCTGCCCAACCGAAAGCTGGTTTGATTAATGTTTTGATCGAAATCCCCGGCGGCAGCAAAAA
CAAGTATGAGTTCGATAAGGATATGAATGCCTTTGCCCTCGACCGGGTGCTCTTTTCTTCGGTGAAATATCCCTACGACT
ATGGCTTCGTGCCCAATACCCTCGCCGATGATGGCGATCCCCTCGATGGGATGGTGATTATGGACGAGCCGACCTTCCCT
GGTTGTGTCATCGCTGCCCGCCCCATTGGGATGCTGGAAATGATCGACGGTGGCGATCGCGACGAAAAAATTCTCTGTGT
TCCCGCTGAAGATCCCCGTTACAACGACATTAAATCCATCAAACAGATCTCCCAGCACCGCCTAGATGAAATTGCCGAAT
TCTTTGCCTCCTACAAGAACCTGGAGAAAAAAGAAGTGGAAATTTTAGGCTGGAAAGATATTGATGCCGTTGCGCCCATC
GTGGAAGAGTGCGTCAAAGCTTACAAATAG

Upstream 100 bases:

>100_bases
CTTCTGTGTAGAATGCTTGAGGGCGATCGCCTCGCACTTTTTTAGAGTGTTTCAGGGCCGCCTCAACCCTTTGTTCTGGA
TATATTTGGAGAAATTACCC

Downstream 100 bases:

>100_bases
AGTGCTGTAAATTGACAATGTTTAAGGGTGGGCGTGTTCTTATTGGGATGCGCCCCTTGCTTTGGGTTCTAAGCCAAGAC
CCCATGGAGAAAAATGTCGG

Product: inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNTLADDGDPLDGMVIMDEPTFP
GCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSIKQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPI
VEECVKAYK

Sequences:

>Translated_169_residues
MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNTLADDGDPLDGMVIMDEPTFP
GCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSIKQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPI
VEECVKAYK
>Mature_169_residues
MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNTLADDGDPLDGMVIMDEPTFP
GCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSIKQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPI
VEECVKAYK

Specific function: Hydrolyzes PPi generated in anabolic reactions [H]

COG id: COG0221

COG function: function code C; Inorganic pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PPase family [H]

Homologues:

Organism=Escherichia coli, GI1790673, Length=146, Percent_Identity=39.7260273972603, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: 5480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008162 [H]

Pfam domain/function: PF00719 Pyrophosphatase [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 18949; Mature: 18949

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
LADDGDPLDGMVIMDEPTFPGCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSI
CCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHH
KQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPIVEECVKAYK
HHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLSRIPAQPKAGLINVLIEIPGGSKNKYEFDKDMNAFALDRVLFSSVKYPYDYGFVPNT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
LADDGDPLDGMVIMDEPTFPGCVIAARPIGMLEMIDGGDRDEKILCVPAEDPRYNDIKSI
CCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHH
KQISQHRLDEIAEFFASYKNLEKKEVEILGWKDIDAVAPIVEECVKAYK
HHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]