Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077762

Identifier: 170077762

GI number: 170077762

Start: 1177581

End: 1178765

Strand: Reverse

Name: 170077762

Synonym: SYNPCC7002_A1144

Alternate gene names: NA

Gene position: 1178765-1177581 (Counterclockwise)

Preceding gene: 170077765

Following gene: 170077759

Centisome position: 39.19

GC content: 51.31

Gene sequence:

>1185_bases
ATGGGGTATTTAAAGCCAGCAGAACTGATCACAAAAAATTTAACAACCCTCTGGCTTCTCAAGGGCCTTGAATCTGCTTG
GTTTCCAATTCCGGTCATCGTGCTGTTTTACGAATCCCAGGGTTTATCCATTGCCCAGGCGGTGTTACTCAAGGCGATTT
TGTCGGCGGCGATCTTTGTGGGGGAAATTCCGTCGGGTTATTTTGCCGATCAATTTGGCCGCAAAAATAGTCTCGTGCTG
GGGGCGAGTTTGTGGTTGGTGGGTTGGCTGATTTATTGCACCCAAGGGAGTTTTAGCTGGTTTGCCTGGGCCGAAATCTT
GACAGGGCTTGGCGGTAGTTTAATCTCTGGAGCCGATAGTGCGATCGCCTACGATAGTTTGCTTGCCCTGAATCGAACCG
AAAAATATGCAGCCTGGGAAGGAAAAGGAGTCGCAATCATGGGTATTACAGAAGCGGTCTGTGGTCTCATGGGAGCTTGG
GTCGCCCAGTGGGATCTGCGCTATCCGTTTTATTTGCAAACTCTCTGCATTGGCGCTTATCTGGGGTTGGCATTGACGCT
CCGGGAACCGCCCCAGCAACACCCAGAAAAAACACCGGGCTGGCGTACTTTGTTGCCGCAGATTCGGGCAATTTTTCAGG
AAAGGCGATCGCTCCGGTGGCTGCTGCTCTTTTCGGCATCCTTAAGTTGCGGTTCTTTTTTAGTGGTGTGGGTTTCCCAG
GAATATCTTGTAGACCGGGGTCTGGGTTTGACCCAACTGGGCTGGTCTTGGTTACTATTCCACGGGGCAATGGCCCTTAT
TTCTTGGCGCGTTCACACTTTCGTCCGCTGGTTTTCCTACCGCCGCTTATTTGCGCTGCTGCCCGGATGTATGGCGATCG
CCTACATTGCGATGGGCCTGATTGAAAACCTCTGGGGGATTCTATTAATTGTCGTTATTTATCTTGTGCGGGGCTGCAAC
ACACCGTTGGTCTTGAGCTATCTCAATGAGCGAATTCCCTCGAACCTACGGGCAACCCTGATTTCCCTGAATAGCTTTGC
GTTTCGGTTGCTGTTTATCGGGCTGGCGGCGATCGCCAATGGGGCAACGTGGCTTTGGGGGCTTAACGGCAGCTTAATTG
TTGTCGGCATTGTGGTGGGCGTAACTTCTTTGTACGGTTATTTAAAATTACGCCCGGCTCTCTAA

Upstream 100 bases:

>100_bases
TCTTAATCGCCGGCGGGTACAAGGGCTGAGCGATTGAGGCGAGCAATATCAATCGGAGTTTCGCAACACCTAGTAAAACC
AATGGTGTCTTTAACAAAAC

Downstream 100 bases:

>100_bases
CTAAACCAAGAGGTCAGCCAGGGGCTTAAAGGAAAATTGGCGATCGCCACCCATTTCCACGACCACTTTAATCTGAGGAT
TGTCTTGGGTCAGGCTCACA

Product: MFS family transporter

Products: NA

Alternate protein names: Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MDR-Like Permease; Multidrug Efflux Protein Variant; MFS Family Transporter

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MGYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFVGEIPSGYFADQFGRKNSLVL
GASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADSAIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAW
VAQWDLRYPFYLQTLCIGAYLGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ
EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGLIENLWGILLIVVIYLVRGCN
TPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIANGATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL

Sequences:

>Translated_394_residues
MGYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFVGEIPSGYFADQFGRKNSLVL
GASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADSAIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAW
VAQWDLRYPFYLQTLCIGAYLGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ
EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGLIENLWGILLIVVIYLVRGCN
TPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIANGATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL
>Mature_393_residues
GYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFVGEIPSGYFADQFGRKNSLVLG
ASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADSAIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAWV
AQWDLRYPFYLQTLCIGAYLGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQE
YLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGLIENLWGILLIVVIYLVRGCNT
PLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIANGATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43727; Mature: 43596

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
GEIPSGYFADQFGRKNSLVLGASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADS
HCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCH
AIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAWVAQWDLRYPFYLQTLCIGAY
HHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ
HHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECH
EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENLWGILLIVVIYLVRGCNTPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIAN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL
CCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
GYLKPAELITKNLTTLWLLKGLESAWFPIPVIVLFYESQGLSIAQAVLLKAILSAAIFV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
GEIPSGYFADQFGRKNSLVLGASLWLVGWLIYCTQGSFSWFAWAEILTGLGGSLISGADS
HCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCH
AIAYDSLLALNRTEKYAAWEGKGVAIMGITEAVCGLMGAWVAQWDLRYPFYLQTLCIGAY
HHHHHHHHHHCCCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LGLALTLREPPQQHPEKTPGWRTLLPQIRAIFQERRSLRWLLLFSASLSCGSFLVVWVSQ
HHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECH
EYLVDRGLGLTQLGWSWLLFHGAMALISWRVHTFVRWFSYRRLFALLPGCMAIAYIAMGL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENLWGILLIVVIYLVRGCNTPLVLSYLNERIPSNLRATLISLNSFAFRLLFIGLAAIAN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GATWLWGLNGSLIVVGIVVGVTSLYGYLKLRPAL
CCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA