| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077747
Identifier: 170077747
GI number: 170077747
Start: 1161043
End: 1162209
Strand: Direct
Name: 170077747
Synonym: SYNPCC7002_A1129
Alternate gene names: NA
Gene position: 1161043-1162209 (Clockwise)
Preceding gene: 170077745
Following gene: 170077748
Centisome position: 38.6
GC content: 53.13
Gene sequence:
>1167_bases ATGGCACAACCGCAGCATAATTTTTACCTCAGCCTCGAACGACGTTGGGTCGCTCCCGCCTATGGGGGTGGTATTTTATT TGTCATTGCCCTCTGTTTTTTTGGGGCCGCCACAAATACGATGGCGGGCTGGTTATATGTCCTCAGCGGTACGATCCTCG CCATTTTATGTTTAGGGGCAATCCTGCCAGTGCGAGCCTTGAGGCAACTTGAAATTCGGCGATCGCCCACGGCCCCGGTT AGCGTTGGGGAAGTTTTAAGCATTCATCTAACCCTGACCAATGACAGTAAAAACGCCAAAACCCTCATTGCTGTCACAGA TCAAATTTCGTCTGGCTTGGGGGCACCCCGGCGGACAGTCCTAGAAACCCTCTCACCCCAGGAAAGTTTAGATTGGGTCT ACGAGCTAGATGCCCAAAAACGTGGTGTATTTCAGTGGGAGGGAGTCGAGTTGCGCACCGCAAACCCCTTGGGCTTGTTT TGGTGTCGGCGGCGGCGTTCAGTACCGGGCCGGGTTGTGGTTTATCCGCAAATTTTTCCCCTGAGTAGTTGCCCGATCAT TGACCACATCGGCAGCGAAGACAGCACCAAATTTCAGAGTGAAAATCTCTATCAAAACGCCACCGAAGGGATGACGAAGG CGATTCGGAACTACCGGATGGGCGACCCAATGCGGTTGATCCACTGGCGCAGCAGTGCCCGCTTTGGGGAATTTAAGGTA CGGGAGCTAGAAATTACCACGGGCGGCGAAGAACTGATTATTTGCTTGGATCATCATTTTGCTTGGGAGGCCGATAGCTT TGAACAGGCGGCCAGTGCAGCGGCTTCTCTCTATTTTTATGCCCGGCGATCGCAACTGAATGTGAAATTTTGGACAGCCC AGAGTGGTCTGCTCAACAGCCGCGCGACGATCCTCGAAGCCCTGGCCCGGATTAATCCTGAGCCATTAGGAGAAAATACG TCTCTATCCCGCCCGGAAGGTTCATTGTTATGGTTAACCCAAAACCCCCAAACGCTCCTGGAGCTAAACCCCGGCAACCG CTGGCTCTTTTTCCAAGGAGCGCCTGAACAAACGGTGACCGGGGGCCATTGTCCGGGTCTCATCATTAATCCCATCGATC CCCTACCCCAACAGTTACAACGGCAAAGCGATCGCCTTTTATCCTAG
Upstream 100 bases:
>100_bases ATTGGGAACAATGGAAAGGGGCATTACTATTGATCCTAGGTAAGGCCGTCCCCTGGAGAGCGGCGATCGTAAACATCCTT AATGGTTTTCTCTTCAACCT
Downstream 100 bases:
>100_bases GGTAATCCCAAGCAAACCAGGGCAGCGTGAGCAATTCTCCACAATTACCGCAAAAAAATCCCCAAGCCCCCCTGTATAAT GGCTTGCAACCCATCTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGAILPVRALRQLEIRRSPTAPV SVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTVLETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLF WCRRRRSVPGRVVVYPQIFPLSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNSRATILEALARINPEPLGENT SLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVTGGHCPGLIINPIDPLPQQLQRQSDRLLS
Sequences:
>Translated_388_residues MAQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGAILPVRALRQLEIRRSPTAPV SVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTVLETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLF WCRRRRSVPGRVVVYPQIFPLSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNSRATILEALARINPEPLGENT SLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVTGGHCPGLIINPIDPLPQQLQRQSDRLLS >Mature_387_residues AQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGAILPVRALRQLEIRRSPTAPVS VGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTVLETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLFW CRRRRSVPGRVVVYPQIFPLSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKVR ELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNSRATILEALARINPEPLGENTS LSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVTGGHCPGLIINPIDPLPQQLQRQSDRLLS
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43347; Mature: 43216
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGA CCCCCCCEEEEEECEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ILPVRALRQLEIRRSPTAPVSVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTV HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEHHHHCCCCCCHHHH LETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLFWCRRRRSVPGRVVVYPQIFP HHHCCCCHHCCEEEEECCCCCCCEEECCEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEC LSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNS EEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCH RATILEALARINPEPLGENTSLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVT HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCC GGHCPGLIINPIDPLPQQLQRQSDRLLS CCCCCCEEECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AQPQHNFYLSLERRWVAPAYGGGILFVIALCFFGAATNTMAGWLYVLSGTILAILCLGA CCCCCCEEEEEECEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ILPVRALRQLEIRRSPTAPVSVGEVLSIHLTLTNDSKNAKTLIAVTDQISSGLGAPRRTV HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEHHHHCCCCCCHHHH LETLSPQESLDWVYELDAQKRGVFQWEGVELRTANPLGLFWCRRRRSVPGRVVVYPQIFP HHHCCCCHHCCEEEEECCCCCCCEEECCEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEC LSSCPIIDHIGSEDSTKFQSENLYQNATEGMTKAIRNYRMGDPMRLIHWRSSARFGEFKV CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE RELEITTGGEELIICLDHHFAWEADSFEQAASAAASLYFYARRSQLNVKFWTAQSGLLNS EEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCH RATILEALARINPEPLGENTSLSRPEGSLLWLTQNPQTLLELNPGNRWLFFQGAPEQTVT HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCC GGHCPGLIINPIDPLPQQLQRQSDRLLS CCCCCCEEECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA