| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077732
Identifier: 170077732
GI number: 170077732
Start: 1145109
End: 1145960
Strand: Direct
Name: 170077732
Synonym: SYNPCC7002_A1114
Alternate gene names: NA
Gene position: 1145109-1145960 (Clockwise)
Preceding gene: 170077725
Following gene: 170077733
Centisome position: 38.07
GC content: 39.2
Gene sequence:
>852_bases ATGAAAAATCGTAAAAATAAGATTTCTTTTTCAATCGTTGTCCTGCTTATTTGTGTTGTATTAGGGAGTTGTAATGAACA GAAAAATACAACTACATCGGCATCAACGCCAGTACCCAGAACGAATACTTCACCCACAGTTCCTGTTAGTTCTTCTCCCA TCCCTGAACCTGCACAAGAATCTGCTCCTCAGCCTGATCCATTCCAAGAAGCTCTAAATGCAGGTATGGATGCTGCAAAA TTTGCTTCGATTGCTCAAGATGAAGCCGATTGGAAAACTGTTGTAGATCTCTGGTTAAAAGCAGTGCAATTACTTGAGAA AGTACCAAAAGATCATAAGGATTATACTTTGGCACAGCAAAAGCTCATTGAGTACAAAAAAAATGCTGATCTTACAAAAA ACAAAGTACAAAAAGTTGCTGAAGGAAACAATCAACTAGTGTCAGCTTCTTCTCCTAGTTCTCCAGATTCAACAGCCTCT CAATCTCAACCAAAAGCAGTGCCATCACAACCTAAACCTCAACAGCAAGAAATGCCTGTCGATATGGCTAAACAGTTGTT GAATACTTGGATAAATGCAATCACAAAAGAGGGTGATGATGGAACGCGCTACTGGTGCAGTCAATATGCAATTCTTCAAT CCAGTCTTTTTGCTCCTCGTAAAGTTGAGATTCTTGATTATTTTACAAGTGGAGATATTGCAAGAGTAAAGCTCCGTATT GAATCCAGTAATAAAGGAGGGCAAGCAATTATTGCTGATTGGAGTTTGGGAATGACCAAAGAAGAAGATGCTGAAAGAGC TAAACAACTGCCGGGTGGATGGTGTATAGCAGATCTCAGCAATTACAATTAA
Upstream 100 bases:
>100_bases ATACATATACTGTTTGCTGTAAGTAAGATAAGATAATCGGTGTGTTCTTATGGATTTATTGAAATCATGAACTTTATGAC TTTTTTTATGCGGAGATAAT
Downstream 100 bases:
>100_bases GTACCTGCTGATCAAGAAACAAGAGTGATCTCTGAACTGTAAGGTTTTTTAATAAAAAACAACGCATCTTTTTGATGATT TATTTGAGATAAATTTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKNRKNKISFSIVVLLICVVLGSCNEQKNTTTSASTPVPRTNTSPTVPVSSSPIPEPAQESAPQPDPFQEALNAGMDAAK FASIAQDEADWKTVVDLWLKAVQLLEKVPKDHKDYTLAQQKLIEYKKNADLTKNKVQKVAEGNNQLVSASSPSSPDSTAS QSQPKAVPSQPKPQQQEMPVDMAKQLLNTWINAITKEGDDGTRYWCSQYAILQSSLFAPRKVEILDYFTSGDIARVKLRI ESSNKGGQAIIADWSLGMTKEEDAERAKQLPGGWCIADLSNYN
Sequences:
>Translated_283_residues MKNRKNKISFSIVVLLICVVLGSCNEQKNTTTSASTPVPRTNTSPTVPVSSSPIPEPAQESAPQPDPFQEALNAGMDAAK FASIAQDEADWKTVVDLWLKAVQLLEKVPKDHKDYTLAQQKLIEYKKNADLTKNKVQKVAEGNNQLVSASSPSSPDSTAS QSQPKAVPSQPKPQQQEMPVDMAKQLLNTWINAITKEGDDGTRYWCSQYAILQSSLFAPRKVEILDYFTSGDIARVKLRI ESSNKGGQAIIADWSLGMTKEEDAERAKQLPGGWCIADLSNYN >Mature_283_residues MKNRKNKISFSIVVLLICVVLGSCNEQKNTTTSASTPVPRTNTSPTVPVSSSPIPEPAQESAPQPDPFQEALNAGMDAAK FASIAQDEADWKTVVDLWLKAVQLLEKVPKDHKDYTLAQQKLIEYKKNADLTKNKVQKVAEGNNQLVSASSPSSPDSTAS QSQPKAVPSQPKPQQQEMPVDMAKQLLNTWINAITKEGDDGTRYWCSQYAILQSSLFAPRKVEILDYFTSGDIARVKLRI ESSNKGGQAIIADWSLGMTKEEDAERAKQLPGGWCIADLSNYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31052; Mature: 31052
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRKNKISFSIVVLLICVVLGSCNEQKNTTTSASTPVPRTNTSPTVPVSSSPIPEPAQE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SAPQPDPFQEALNAGMDAAKFASIAQDEADWKTVVDLWLKAVQLLEKVPKDHKDYTLAQQ CCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KLIEYKKNADLTKNKVQKVAEGNNQLVSASSPSSPDSTASQSQPKAVPSQPKPQQQEMPV HHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCH DMAKQLLNTWINAITKEGDDGTRYWCSQYAILQSSLFAPRKVEILDYFTSGDIARVKLRI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHEEEHHCCCCEEEEEEEE ESSNKGGQAIIADWSLGMTKEEDAERAKQLPGGWCIADLSNYN ECCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure MKNRKNKISFSIVVLLICVVLGSCNEQKNTTTSASTPVPRTNTSPTVPVSSSPIPEPAQE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SAPQPDPFQEALNAGMDAAKFASIAQDEADWKTVVDLWLKAVQLLEKVPKDHKDYTLAQQ CCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KLIEYKKNADLTKNKVQKVAEGNNQLVSASSPSSPDSTASQSQPKAVPSQPKPQQQEMPV HHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCH DMAKQLLNTWINAITKEGDDGTRYWCSQYAILQSSLFAPRKVEILDYFTSGDIARVKLRI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHEEEHHCCCCEEEEEEEE ESSNKGGQAIIADWSLGMTKEEDAERAKQLPGGWCIADLSNYN ECCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA