| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is ecaA [H]
Identifier: 170077716
GI number: 170077716
Start: 1125815
End: 1126615
Strand: Direct
Name: ecaA [H]
Synonym: SYNPCC7002_A1096
Alternate gene names: 170077716
Gene position: 1125815-1126615 (Clockwise)
Preceding gene: 170077715
Following gene: 170077720
Centisome position: 37.43
GC content: 51.69
Gene sequence:
>801_bases ATGTTAAGGCGAGTGATTTTGGCGATCGCCATTGCCTTATGGTGGGGTCTATGGGTTGTTTGGGCGGCGCCTCAATCGCA GTTTTTGACAATCGCAAAAACCGTCGCAACCCCTTGGAATTACGCAGATCTTGGCCCCCAGCGGTGGGGCGAGTTGCAAC CAGAGTTCCAGACCTGTGCCATTGGCGAAACCCAATCACCCTTGGCGCTTTTTCCTGAATCGTCTACTCCAGTTTCGGGG GCGTCGCTGCCTTGGCAGTATCAACCGAGTCTCGGGCTTATCCAGGCGACCAGTACCACTTTACAAATCCAAGTCACGGG GAATAACACCCTACAAATCGGCGTTGATCTTTACAAGCTTGAGCAAATTCATTTTCATTATCCCAGTGAGCACCATGTCC AGGGAAAACAATATGCCATGGAAGTTCACTTTGTCCATCGGCGTGCCACCCAAGGAGCCGCTGTTTTGGCGGTACTGGTT GAACCTGGAGCGATCAATCCGACGTTCACCCATATTTTGCAACGGTGGCCGACCCAAGCCCATCCCAGTCAGGTGATTCA CTTCGATCCGGCGGCATTACTCCCCCAAGGCGATCGCCCTTATTTCCATTATCTTGGTTCTTTAACCACGCCCCCTTGCA CGGAAGGAATTCGCTGGTTAGTTTTCGCACAACCCATTGCCTTAGGGGCAGCGCAAATCGAATATTACCAAGCTCTGTAT GCACCAAATGCCCGCCCCCGACAAACAATGACGACCCATCAAGTGCAATATTATGTTCCCGGTCAGGAAACGAAAAATTA G
Upstream 100 bases:
>100_bases GCTTAATTTTTAAAGCTATTTTTGGCTAATTTTGATGGGAGCTGTGGTCACCATGGCTCTTTTTTATTGTTTAGAGGTTT CAGGGAAAGGATTTGGAATC
Downstream 100 bases:
>100_bases GCTACTTTAACAAAAATATTCTCACCTTCTTGGCGGACTTCGTAGCGAGATAAACCGGCGGTGGCTGGCCCCTGAAGCAA TTCACCATCCAAGGCAAACC
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLRRVILAIAIALWWGLWVVWAAPQSQFLTIAKTVATPWNYADLGPQRWGELQPEFQTCAIGETQSPLALFPESSTPVSG ASLPWQYQPSLGLIQATSTTLQIQVTGNNTLQIGVDLYKLEQIHFHYPSEHHVQGKQYAMEVHFVHRRATQGAAVLAVLV EPGAINPTFTHILQRWPTQAHPSQVIHFDPAALLPQGDRPYFHYLGSLTTPPCTEGIRWLVFAQPIALGAAQIEYYQALY APNARPRQTMTTHQVQYYVPGQETKN
Sequences:
>Translated_266_residues MLRRVILAIAIALWWGLWVVWAAPQSQFLTIAKTVATPWNYADLGPQRWGELQPEFQTCAIGETQSPLALFPESSTPVSG ASLPWQYQPSLGLIQATSTTLQIQVTGNNTLQIGVDLYKLEQIHFHYPSEHHVQGKQYAMEVHFVHRRATQGAAVLAVLV EPGAINPTFTHILQRWPTQAHPSQVIHFDPAALLPQGDRPYFHYLGSLTTPPCTEGIRWLVFAQPIALGAAQIEYYQALY APNARPRQTMTTHQVQYYVPGQETKN >Mature_266_residues MLRRVILAIAIALWWGLWVVWAAPQSQFLTIAKTVATPWNYADLGPQRWGELQPEFQTCAIGETQSPLALFPESSTPVSG ASLPWQYQPSLGLIQATSTTLQIQVTGNNTLQIGVDLYKLEQIHFHYPSEHHVQGKQYAMEVHFVHRRATQGAAVLAVLV EPGAINPTFTHILQRWPTQAHPSQVIHFDPAALLPQGDRPYFHYLGSLTTPPCTEGIRWLVFAQPIALGAAQIEYYQALY APNARPRQTMTTHQVQYYVPGQETKN
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG3338
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-carbonic anhydrase family [H]
Homologues:
Organism=Homo sapiens, GI45935383, Length=293, Percent_Identity=28.6689419795222, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI4502515, Length=293, Percent_Identity=28.6689419795222, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI4885101, Length=259, Percent_Identity=31.2741312741313, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI4885099, Length=237, Percent_Identity=30.379746835443, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4557395, Length=268, Percent_Identity=28.7313432835821, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI258679498, Length=248, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI192447434, Length=248, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI192447432, Length=248, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI192447430, Length=248, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4502517, Length=248, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI38348436, Length=258, Percent_Identity=29.0697674418605, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI62240989, Length=169, Percent_Identity=31.9526627218935, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4502519, Length=173, Percent_Identity=32.9479768786127, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI6005723, Length=234, Percent_Identity=26.4957264957265, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI169636420, Length=137, Percent_Identity=36.4963503649635, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI70167127, Length=238, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI22027500, Length=231, Percent_Identity=28.1385281385281, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4502521, Length=143, Percent_Identity=32.1678321678322, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI6912284, Length=249, Percent_Identity=28.9156626506024, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17568715, Length=254, Percent_Identity=25.1968503937008, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71995280, Length=168, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI17737413, Length=239, Percent_Identity=29.2887029288703, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24650523, Length=265, Percent_Identity=24.5283018867925, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116008410, Length=257, Percent_Identity=26.8482490272374, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001148 - InterPro: IPR018338 - InterPro: IPR018340 - InterPro: IPR006311 [H]
Pfam domain/function: PF00194 Carb_anhydrase [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 29828; Mature: 29828
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00162 ALPHA_CA_1 ; PS51144 ALPHA_CA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRVILAIAIALWWGLWVVWAAPQSQFLTIAKTVATPWNYADLGPQRWGELQPEFQTCA CHHHHHHHHHHHHHHHHHEEEECCCHHHEEHHHHHCCCCCCCCCCHHHHCCCCCCCCEEE IGETQSPLALFPESSTPVSGASLPWQYQPSLGLIQATSTTLQIQVTGNNTLQIGVDLYKL CCCCCCCEEECCCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEEECCCEEEEEEEEEEE EQIHFHYPSEHHVQGKQYAMEVHFVHRRATQGAAVLAVLVEPGAINPTFTHILQRWPTQA EEEEEECCCCCCCCCHHEEEEEEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCC HPSQVIHFDPAALLPQGDRPYFHYLGSLTTPPCTEGIRWLVFAQPIALGAAQIEYYQALY CCCEEEEECCHHHCCCCCCCHHHHCCCCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHH APNARPRQTMTTHQVQYYVPGQETKN CCCCCCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure MLRRVILAIAIALWWGLWVVWAAPQSQFLTIAKTVATPWNYADLGPQRWGELQPEFQTCA CHHHHHHHHHHHHHHHHHEEEECCCHHHEEHHHHHCCCCCCCCCCHHHHCCCCCCCCEEE IGETQSPLALFPESSTPVSGASLPWQYQPSLGLIQATSTTLQIQVTGNNTLQIGVDLYKL CCCCCCCEEECCCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEEECCCEEEEEEEEEEE EQIHFHYPSEHHVQGKQYAMEVHFVHRRATQGAAVLAVLVEPGAINPTFTHILQRWPTQA EEEEEECCCCCCCCCHHEEEEEEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCC HPSQVIHFDPAALLPQGDRPYFHYLGSLTTPPCTEGIRWLVFAQPIALGAAQIEYYQALY CCCEEEEECCHHHCCCCCCCHHHHCCCCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHH APNARPRQTMTTHQVQYYVPGQETKN CCCCCCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9006032; 11759840 [H]