Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077715

Identifier: 170077715

GI number: 170077715

Start: 1125156

End: 1125524

Strand: Direct

Name: 170077715

Synonym: SYNPCC7002_A1095

Alternate gene names: NA

Gene position: 1125156-1125524 (Clockwise)

Preceding gene: 170077707

Following gene: 170077716

Centisome position: 37.4

GC content: 45.26

Gene sequence:

>369_bases
ATGAGTGACATCCCGACAACTCCTTTGAAAGGAAAGGCTCTGCTGAGTAAAGTAAAGGAATTATCCCATTTGCCCCGGCG
AGAAACAGCAAAGCTTTGTGGATATAGCAGTACGAAAAATGGCTCGACTCGTGTCAATTTGACGGGTTTTTATGATGCTG
TCCTTGAAGCAAAAGGACTCCCCCTAGACCCCGGTGGCAGTCAAGATGGCCGCGGGAGAGAGCCGACCTATCGGGTGAGT
GTTCACAAAAATGGCCAAATTGTCATTGGTTCAACTTACACGAATCAAATGAACCTGAAACCAGGGGATGAATTTGAAAT
TAAAATTGGCTACAAGCACATTCACCTAAAACAGATCAACGAAGGCTAA

Upstream 100 bases:

>100_bases
AAAAAACTGCGCAAAACAGAATTTTTGCAGTTATATTTACAAATGTGGTAAGTTTATTGCCGACAAAAATTTAGACTCAA
AAAACAAGCGTTTTAGAAAT

Downstream 100 bases:

>100_bases
AAAGGCAACAATAGTCAAGCCTTTTGGCGATTTTTTAGCGTCCCTCCTTGACACGCCTGATTTCATTCCTGGGGTTTACT
AAATCTACGGGTTGATATTT

Product: transciptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGLPLDPGGSQDGRGREPTYRVS
VHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQINEG

Sequences:

>Translated_122_residues
MSDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGLPLDPGGSQDGRGREPTYRVS
VHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQINEG
>Mature_121_residues
SDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGLPLDPGGSQDGRGREPTYRVSV
HKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQINEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13395; Mature: 13264

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGL
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEEEEHHHHHHHCCCC
PLDPGGSQDGRGREPTYRVSVHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQIN
CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCEEEEECCEEEEEEECC
EG
CC
>Mature Secondary Structure 
SDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGL
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEEEEHHHHHHHCCCC
PLDPGGSQDGRGREPTYRVSVHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQIN
CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCEEEEECCEEEEEEECC
EG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA