| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077715
Identifier: 170077715
GI number: 170077715
Start: 1125156
End: 1125524
Strand: Direct
Name: 170077715
Synonym: SYNPCC7002_A1095
Alternate gene names: NA
Gene position: 1125156-1125524 (Clockwise)
Preceding gene: 170077707
Following gene: 170077716
Centisome position: 37.4
GC content: 45.26
Gene sequence:
>369_bases ATGAGTGACATCCCGACAACTCCTTTGAAAGGAAAGGCTCTGCTGAGTAAAGTAAAGGAATTATCCCATTTGCCCCGGCG AGAAACAGCAAAGCTTTGTGGATATAGCAGTACGAAAAATGGCTCGACTCGTGTCAATTTGACGGGTTTTTATGATGCTG TCCTTGAAGCAAAAGGACTCCCCCTAGACCCCGGTGGCAGTCAAGATGGCCGCGGGAGAGAGCCGACCTATCGGGTGAGT GTTCACAAAAATGGCCAAATTGTCATTGGTTCAACTTACACGAATCAAATGAACCTGAAACCAGGGGATGAATTTGAAAT TAAAATTGGCTACAAGCACATTCACCTAAAACAGATCAACGAAGGCTAA
Upstream 100 bases:
>100_bases AAAAAACTGCGCAAAACAGAATTTTTGCAGTTATATTTACAAATGTGGTAAGTTTATTGCCGACAAAAATTTAGACTCAA AAAACAAGCGTTTTAGAAAT
Downstream 100 bases:
>100_bases AAAGGCAACAATAGTCAAGCCTTTTGGCGATTTTTTAGCGTCCCTCCTTGACACGCCTGATTTCATTCCTGGGGTTTACT AAATCTACGGGTTGATATTT
Product: transciptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGLPLDPGGSQDGRGREPTYRVS VHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQINEG
Sequences:
>Translated_122_residues MSDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGLPLDPGGSQDGRGREPTYRVS VHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQINEG >Mature_121_residues SDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGLPLDPGGSQDGRGREPTYRVSV HKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQINEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13395; Mature: 13264
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGL CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEEEEHHHHHHHCCCC PLDPGGSQDGRGREPTYRVSVHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQIN CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCEEEEECCEEEEEEECC EG CC >Mature Secondary Structure SDIPTTPLKGKALLSKVKELSHLPRRETAKLCGYSSTKNGSTRVNLTGFYDAVLEAKGL CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEEEEHHHHHHHCCCC PLDPGGSQDGRGREPTYRVSVHKNGQIVIGSTYTNQMNLKPGDEFEIKIGYKHIHLKQIN CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCEEEEECCEEEEEEECC EG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA