| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077693
Identifier: 170077693
GI number: 170077693
Start: 1102771
End: 1104747
Strand: Direct
Name: 170077693
Synonym: SYNPCC7002_A1073
Alternate gene names: NA
Gene position: 1102771-1104747 (Clockwise)
Preceding gene: 170077692
Following gene: 170077694
Centisome position: 36.66
GC content: 32.93
Gene sequence:
>1977_bases ATGATCGACTTCTCATCTCTAAAACTTGTTGTTCACAAAAAATACTCTTTTGTGGGTATTGAAGCAAATGTAGGCGAGTA TTACTTCTGTTTGCCAAAAGGATTTCAAGATCACATCAATTATTTGGACACTTTTTATAATAAAAAAAGATTATTTTTTC TTTTTTATAAAGTCTTTGAAAGGTTTAGAGAGATTTTAGAAATAAAAGGGGAGTCTAGCAGGATAAGAAATCAAACTCAA GATCGAGATGGAGTAATAGATGATGATTCTGATGGAGCTATTCAGGCAAATGAAGAGAATAGCTTTGTATTTTATTCAAA ACTAAACTCATTTGACTCTATATTACAAGTATATGATGAACCTAAAATTCTCTCACTAGCATATCGGCTTAGCAGAACTC ATGACATAGATACGAGTCAAATACATAAATATCTGCATCAAGCAGTTTATTTAGCAAACGATACTGCATATGTGGATACA ATGCTATTGCCAAGTAGATGTGTGAAGTATGAAGCAGCAGATATTGTCAAAATGTATTGCTATATTTATTCGGAGCTTCA ATTAGAGTTGCAAGGAGATATTTCTATTGAAATTACAGCCCTTGCAGAAAATTTTAGAGAGAATCATCTATCTGGTAGTA CTTCTTTATTTGAAGAGAAAGCTTGTAATCAGATTGTTAATCAATTAAAAGACATTTTAGAGGAGATTCATCACCATACT CCATTCAAAGATCCTGATTATTGGGATTTCTATGAAGCCATTGAAAATTTTCTATATGGAAAATTCGACTCATCCCAAGA TGGCAAAATATGGGGCATCAACAATTTTCACTCTGTTTGGGAATCAATATGTCTTGACTACATATCCCGAAATATCTCTT CTGAAGAGATTTTATATATTGATACAGGGTATATTGACTTTCTACAGACTGATAGTACTTTTGGGCGTAATGTGTTTTCT GTCAATGGCAGATCCTTAAGACCTGATGTAGTCATAGGAAAATTTTCTTGTGTTGAACAACCTGAACAAATTATTACTTT ACATGGTGACAACTGGAATGATTTTGGCTACAGAACATTGTTCGGAATTGATGAAGAGGAAGACCGAAATATTCGAGTAG CTTTTATAGGTCAGACAACTTCAGAGGATACATATCAGGAGCTACAGAAATACTATGATTCTAATTCAGGTGAAATTTAC ATCAACAATAAACTTCCCTCTAAATTCATCTCATTTTACGAGCCCCCCGAAGATTTATCCTTCGATTCTCTAAATCAGAT GAATGTGCTCAATCATATTTTCATGATTGGAATAGACAAAAAAATATTCGACTTAGAACTTTTTGAAAAGTATATATTTA ACGCTTTTAATCTTAATGGCCGTTCCGGATATGATGCGAATAATGTTATTGGTGCCTCCCTCTTTAGAGGCCGAAGTATA ACAAGGATAAAAGAATTATTTGATGATTTTATAAATCAATATTTAGAATTAACAGAAGGAATATTTAACAGAATCTTAAT TCATGACATCAAATATTTATCAAAGCAATATCTCATGGACAAGAAAAATAAAAAAATTATCAAAAAACGATCTATTCGGA AACAGTTTGTTTATGAGTATTTGATACAGCAACAAAGTCCTGAGCTAAACACTCTAAACAATAATGTAGATATATCTAGT TCTTTCTGGATTCCTGATTTTCGACCTTTTGATAGAAATATGTTTTCAGTAGAAAATTCTTTTCTTGGTGGCTACATCGA ATTGATAAAAGTGAATTTTGTACAAATTGCAGAGTACTATTCTTCCTTTCAAGCCTTACTTACTTATCCTATTGCGTCAC CAGTTTCCGGGCCCTCTCCTCTACAGCAAGAGGAAGGAGTTAGTGCACTTGAACTTACCGGAGACCTTGTTGGCTCTGTT GAAGGAGTAGAAGATTTAGCGACAAATCAAGATTACTTTGAAGGTTTTGGTCAATGA
Upstream 100 bases:
>100_bases TAGGGCAGAAATTTTTCTCGACAAAATGCATGATCTTGCTTCAAACAGATTCAAATATATTGATCTAGACGAGGATATCG GAGAAATATCATTTTAGATT
Downstream 100 bases:
>100_bases ACAAAAGTTCAGTTGTGTGGAGAGAAAGGGAGGCGATCGTGGCCCGTCAACCGTTTGGGGGCTTCAAGATGTCCGGTGTA GGTTCTAAGGCGGGAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MIDFSSLKLVVHKKYSFVGIEANVGEYYFCLPKGFQDHINYLDTFYNKKRLFFLFYKVFERFREILEIKGESSRIRNQTQ DRDGVIDDDSDGAIQANEENSFVFYSKLNSFDSILQVYDEPKILSLAYRLSRTHDIDTSQIHKYLHQAVYLANDTAYVDT MLLPSRCVKYEAADIVKMYCYIYSELQLELQGDISIEITALAENFRENHLSGSTSLFEEKACNQIVNQLKDILEEIHHHT PFKDPDYWDFYEAIENFLYGKFDSSQDGKIWGINNFHSVWESICLDYISRNISSEEILYIDTGYIDFLQTDSTFGRNVFS VNGRSLRPDVVIGKFSCVEQPEQIITLHGDNWNDFGYRTLFGIDEEEDRNIRVAFIGQTTSEDTYQELQKYYDSNSGEIY INNKLPSKFISFYEPPEDLSFDSLNQMNVLNHIFMIGIDKKIFDLELFEKYIFNAFNLNGRSGYDANNVIGASLFRGRSI TRIKELFDDFINQYLELTEGIFNRILIHDIKYLSKQYLMDKKNKKIIKKRSIRKQFVYEYLIQQQSPELNTLNNNVDISS SFWIPDFRPFDRNMFSVENSFLGGYIELIKVNFVQIAEYYSSFQALLTYPIASPVSGPSPLQQEEGVSALELTGDLVGSV EGVEDLATNQDYFEGFGQ
Sequences:
>Translated_658_residues MIDFSSLKLVVHKKYSFVGIEANVGEYYFCLPKGFQDHINYLDTFYNKKRLFFLFYKVFERFREILEIKGESSRIRNQTQ DRDGVIDDDSDGAIQANEENSFVFYSKLNSFDSILQVYDEPKILSLAYRLSRTHDIDTSQIHKYLHQAVYLANDTAYVDT MLLPSRCVKYEAADIVKMYCYIYSELQLELQGDISIEITALAENFRENHLSGSTSLFEEKACNQIVNQLKDILEEIHHHT PFKDPDYWDFYEAIENFLYGKFDSSQDGKIWGINNFHSVWESICLDYISRNISSEEILYIDTGYIDFLQTDSTFGRNVFS VNGRSLRPDVVIGKFSCVEQPEQIITLHGDNWNDFGYRTLFGIDEEEDRNIRVAFIGQTTSEDTYQELQKYYDSNSGEIY INNKLPSKFISFYEPPEDLSFDSLNQMNVLNHIFMIGIDKKIFDLELFEKYIFNAFNLNGRSGYDANNVIGASLFRGRSI TRIKELFDDFINQYLELTEGIFNRILIHDIKYLSKQYLMDKKNKKIIKKRSIRKQFVYEYLIQQQSPELNTLNNNVDISS SFWIPDFRPFDRNMFSVENSFLGGYIELIKVNFVQIAEYYSSFQALLTYPIASPVSGPSPLQQEEGVSALELTGDLVGSV EGVEDLATNQDYFEGFGQ >Mature_658_residues MIDFSSLKLVVHKKYSFVGIEANVGEYYFCLPKGFQDHINYLDTFYNKKRLFFLFYKVFERFREILEIKGESSRIRNQTQ DRDGVIDDDSDGAIQANEENSFVFYSKLNSFDSILQVYDEPKILSLAYRLSRTHDIDTSQIHKYLHQAVYLANDTAYVDT MLLPSRCVKYEAADIVKMYCYIYSELQLELQGDISIEITALAENFRENHLSGSTSLFEEKACNQIVNQLKDILEEIHHHT PFKDPDYWDFYEAIENFLYGKFDSSQDGKIWGINNFHSVWESICLDYISRNISSEEILYIDTGYIDFLQTDSTFGRNVFS VNGRSLRPDVVIGKFSCVEQPEQIITLHGDNWNDFGYRTLFGIDEEEDRNIRVAFIGQTTSEDTYQELQKYYDSNSGEIY INNKLPSKFISFYEPPEDLSFDSLNQMNVLNHIFMIGIDKKIFDLELFEKYIFNAFNLNGRSGYDANNVIGASLFRGRSI TRIKELFDDFINQYLELTEGIFNRILIHDIKYLSKQYLMDKKNKKIIKKRSIRKQFVYEYLIQQQSPELNTLNNNVDISS SFWIPDFRPFDRNMFSVENSFLGGYIELIKVNFVQIAEYYSSFQALLTYPIASPVSGPSPLQQEEGVSALELTGDLVGSV EGVEDLATNQDYFEGFGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76622; Mature: 76622
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFSSLKLVVHKKYSFVGIEANVGEYYFCLPKGFQDHINYLDTFYNKKRLFFLFYKVFE CCCHHHEEEEEEECEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHH RFREILEIKGESSRIRNQTQDRDGVIDDDSDGAIQANEENSFVFYSKLNSFDSILQVYDE HHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHCC PKILSLAYRLSRTHDIDTSQIHKYLHQAVYLANDTAYVDTMLLPSRCVKYEAADIVKMYC CHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH YIYSELQLELQGDISIEITALAENFRENHLSGSTSLFEEKACNQIVNQLKDILEEIHHHT HHHHHHEEEEECCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PFKDPDYWDFYEAIENFLYGKFDSSQDGKIWGINNFHSVWESICLDYISRNISSEEILYI CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEE DTGYIDFLQTDSTFGRNVFSVNGRSLRPDVVIGKFSCVEQPEQIITLHGDNWNDFGYRTL ECCCEEEEECCCCCCCCEEEECCCCCCCCEEEECCHHHCCCCEEEEEECCCCCCCCCEEE FGIDEEEDRNIRVAFIGQTTSEDTYQELQKYYDSNSGEIYINNKLPSKFISFYEPPEDLS ECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCC FDSLNQMNVLNHIFMIGIDKKIFDLELFEKYIFNAFNLNGRSGYDANNVIGASLFRGRSI CCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCH TRIKELFDDFINQYLELTEGIFNRILIHDIKYLSKQYLMDKKNKKIIKKRSIRKQFVYEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LIQQQSPELNTLNNNVDISSSFWIPDFRPFDRNMFSVENSFLGGYIELIKVNFVQIAEYY HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSFQALLTYPIASPVSGPSPLQQEEGVSALELTGDLVGSVEGVEDLATNQDYFEGFGQ HHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MIDFSSLKLVVHKKYSFVGIEANVGEYYFCLPKGFQDHINYLDTFYNKKRLFFLFYKVFE CCCHHHEEEEEEECEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHH RFREILEIKGESSRIRNQTQDRDGVIDDDSDGAIQANEENSFVFYSKLNSFDSILQVYDE HHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHCC PKILSLAYRLSRTHDIDTSQIHKYLHQAVYLANDTAYVDTMLLPSRCVKYEAADIVKMYC CHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH YIYSELQLELQGDISIEITALAENFRENHLSGSTSLFEEKACNQIVNQLKDILEEIHHHT HHHHHHEEEEECCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PFKDPDYWDFYEAIENFLYGKFDSSQDGKIWGINNFHSVWESICLDYISRNISSEEILYI CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEE DTGYIDFLQTDSTFGRNVFSVNGRSLRPDVVIGKFSCVEQPEQIITLHGDNWNDFGYRTL ECCCEEEEECCCCCCCCEEEECCCCCCCCEEEECCHHHCCCCEEEEEECCCCCCCCCEEE FGIDEEEDRNIRVAFIGQTTSEDTYQELQKYYDSNSGEIYINNKLPSKFISFYEPPEDLS ECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCC FDSLNQMNVLNHIFMIGIDKKIFDLELFEKYIFNAFNLNGRSGYDANNVIGASLFRGRSI CCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCH TRIKELFDDFINQYLELTEGIFNRILIHDIKYLSKQYLMDKKNKKIIKKRSIRKQFVYEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LIQQQSPELNTLNNNVDISSSFWIPDFRPFDRNMFSVENSFLGGYIELIKVNFVQIAEYY HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSFQALLTYPIASPVSGPSPLQQEEGVSALELTGDLVGSVEGVEDLATNQDYFEGFGQ HHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA