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The map label for this gene is ydiS [H]

Identifier: 170077692

GI number: 170077692

Start: 1101587

End: 1102444

Strand: Direct

Name: ydiS [H]

Synonym: SYNPCC7002_A1072

Alternate gene names: 170077692

Gene position: 1101587-1102444 (Clockwise)

Preceding gene: 170077691

Following gene: 170077693

Centisome position: 36.62

GC content: 36.13

Gene sequence:

>858_bases
ATGCCACCTATCCAGAAAATCTTATTTGGCAGTCCCGGAACAGGAAAAAGCTACAAAGTTCGTGAAATTGCGCAACAAGA
ATTAGACATCACATACGATGAAGCTTCTGGAATTTTAGAGAATACTGTTAAAACTGTTTTCCACCCTGAATATACCCATG
CTGACTTCATGGGTAAGTTAATGCCTTTAACGCAAGGTGAAAAAGTAACTTATAAATTTTATGCAGGTCATTTCCTTCAG
GTATTGGGAGAAGCATATAAATCAATCATCAATGGAGAGACAGCAAGCTATTTATTAGTGATCGATGAGCTGAACCGAGG
GAATGCTTCAGCAATCTTTGGATCAATTTTTCAATTGCTAGATAGAGAAGACGATGGCTGGTCTAGCTATGATATTCAAC
TATCTGATATGGAATTATATGCATTACTAGAAATCACACTTAGTAGTGAACTTTTTATAGAAAGTAACGGGCTAGAAGTA
AGAAATGAAAAAGGGAATAGAGTTACTATTAACAATTTCTGGGATGAGAAAATCTACCAGTATAGAAAAGCTCCTCCTGA
AAATGAGTTGGATTCTCAAGTCATCAAAGATGCGGGACGATTAATTACACTCTTGAGGCGGCATAAAATCAGCTTACCTC
CAAATCTTAGTATCCTCTGTACGATCAATACTTCTGATGAATCTATTTACTATTTAGATAGTGCTTTTAAGCGTCGCTGG
GACTGGGAATATATTGATATTCCGACTGATGGTTATTTAAGTGATCTTCCCTCTGAGCTATTCGGAACAATGCTTGTTAT
TAATGGTCATGAGAAAGGTCTATGGATTAATATATTACAGGCATTAATGAATTCATAA

Upstream 100 bases:

>100_bases
GACTCATAGAGTATTTCGCACCATAACGGTTTCTTGATAGTTAAAGCTCTCTTACTTCATAATGTAAGAGAGTTTTTTAT
TTCCAAATGCTTCAATACAT

Downstream 100 bases:

>100_bases
AAGCAAATCATCAATCAATTCGGAGAATTGAAGATAAGCAAATTGGCTGGTGGTTTATAAAACCTAAAGATAATGTCGTC
AACATTGAGGATGTTAGAAA

Product: GTPase subunit of Type II restriction endonuclease

Products: NA

Alternate protein names: R.BsuM; R.BsuMI; Endonuclease BsuMI component ydiS; Type II restriction enzyme BsuMI component ydiS [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPPIQKILFGSPGTGKSYKVREIAQQELDITYDEASGILENTVKTVFHPEYTHADFMGKLMPLTQGEKVTYKFYAGHFLQ
VLGEAYKSIINGETASYLLVIDELNRGNASAIFGSIFQLLDREDDGWSSYDIQLSDMELYALLEITLSSELFIESNGLEV
RNEKGNRVTINNFWDEKIYQYRKAPPENELDSQVIKDAGRLITLLRRHKISLPPNLSILCTINTSDESIYYLDSAFKRRW
DWEYIDIPTDGYLSDLPSELFGTMLVINGHEKGLWINILQALMNS

Sequences:

>Translated_285_residues
MPPIQKILFGSPGTGKSYKVREIAQQELDITYDEASGILENTVKTVFHPEYTHADFMGKLMPLTQGEKVTYKFYAGHFLQ
VLGEAYKSIINGETASYLLVIDELNRGNASAIFGSIFQLLDREDDGWSSYDIQLSDMELYALLEITLSSELFIESNGLEV
RNEKGNRVTINNFWDEKIYQYRKAPPENELDSQVIKDAGRLITLLRRHKISLPPNLSILCTINTSDESIYYLDSAFKRRW
DWEYIDIPTDGYLSDLPSELFGTMLVINGHEKGLWINILQALMNS
>Mature_284_residues
PPIQKILFGSPGTGKSYKVREIAQQELDITYDEASGILENTVKTVFHPEYTHADFMGKLMPLTQGEKVTYKFYAGHFLQV
LGEAYKSIINGETASYLLVIDELNRGNASAIFGSIFQLLDREDDGWSSYDIQLSDMELYALLEITLSSELFIESNGLEVR
NEKGNRVTINNFWDEKIYQYRKAPPENELDSQVIKDAGRLITLLRRHKISLPPNLSILCTINTSDESIYYLDSAFKRRWD
WEYIDIPTDGYLSDLPSELFGTMLVINGHEKGLWINILQALMNS

Specific function: Recognizes the double-stranded sequence CTCGAG; the cleavage site is unknown [H]

COG id: COG1401

COG function: function code V; GTPase subunit of restriction endonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011704 [H]

Pfam domain/function: PF07728 AAA_5 [H]

EC number: =3.1.21.4 [H]

Molecular weight: Translated: 32556; Mature: 32425

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPIQKILFGSPGTGKSYKVREIAQQELDITYDEASGILENTVKTVFHPEYTHADFMGKL
CCCHHHHHCCCCCCCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH
MPLTQGEKVTYKFYAGHFLQVLGEAYKSIINGETASYLLVIDELNRGNASAIFGSIFQLL
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
DREDDGWSSYDIQLSDMELYALLEITLSSELFIESNGLEVRNEKGNRVTINNFWDEKIYQ
CCCCCCCCEEEEEECCCEEEEEEEEEECCEEEEECCCCEEECCCCCEEEECCCHHHHHHH
YRKAPPENELDSQVIKDAGRLITLLRRHKISLPPNLSILCTINTSDESIYYLDSAFKRRW
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEHHHHHCC
DWEYIDIPTDGYLSDLPSELFGTMLVINGHEKGLWINILQALMNS
CCEEEECCCCCHHHHCCHHHCCEEEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PPIQKILFGSPGTGKSYKVREIAQQELDITYDEASGILENTVKTVFHPEYTHADFMGKL
CCHHHHHCCCCCCCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH
MPLTQGEKVTYKFYAGHFLQVLGEAYKSIINGETASYLLVIDELNRGNASAIFGSIFQLL
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
DREDDGWSSYDIQLSDMELYALLEITLSSELFIESNGLEVRNEKGNRVTINNFWDEKIYQ
CCCCCCCCEEEEEECCCEEEEEEEEEECCEEEEECCCCEEECCCCCEEEECCCHHHHHHH
YRKAPPENELDSQVIKDAGRLITLLRRHKISLPPNLSILCTINTSDESIYYLDSAFKRRW
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEHHHHHCC
DWEYIDIPTDGYLSDLPSELFGTMLVINGHEKGLWINILQALMNS
CCEEEECCCCCHHHHCCHHHCCEEEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]