Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077654

Identifier: 170077654

GI number: 170077654

Start: 1070298

End: 1072124

Strand: Reverse

Name: 170077654

Synonym: SYNPCC7002_A1034

Alternate gene names: NA

Gene position: 1072124-1070298 (Counterclockwise)

Preceding gene: 170077656

Following gene: 170077653

Centisome position: 35.64

GC content: 48.0

Gene sequence:

>1827_bases
ATGTCTAAAACAGTGAGAACTTTTCTCAGTGGCGCTTCCGTTGCCCTAGGTGCAACCGTAGCTTTTTCTGGCACTGCCCA
AGCCAACACTGAACTTCTCGATCAAATCAACAGCTATAGCCAAGACGACATCGCTCAGGTTAATAGCGTTTTCCAACTCA
GCGATGTTTCTCCTTCTGACTGGGCCTTTGACGCACTGCGCAACCTAGTCGAAAACTACAACTGTATCGTTGGTTATCCC
GATGGCACTTTCCGTGGTAGCCGTCCCCTCAGCCGTTATGAATTTGCTGCTGGTCTAAACGCTTGTTTACAGCAGATCGA
GCGGATGATTCAAAGTGGTACTTCTGAAGTAACCCCCGAAGATCTCGCTGCACTCCGTCGTCTCGTGAACGAATTCGAAG
CAGAACTCGCCACCCTCGGTGCTCGCGTTGATGACCTCGAAGGCCGCGTTGAATTCCTCGAAGACAACCAATTCTCCACT
ACCACCAAACTCGGTGGAGAAGTAATCTTCAACCTCGGCGGTGCTTTTGGTGAAGAGAAAGCTTCGCCTCTAGCACTTGA
TTCTATTGAATTTCCTGGTGGAGACTTCGATCCTGAGACTGTTACCTTTGAAGAGTTATTTGACGTAGTTGATTACCAAG
ATATTTCTTCTGAAGAGAGAGAGCTTCTCAAAGAATTTTTCGTAGGTCTTGGCATCGATGAAGACGCTCTAGGGTTTTCT
TTTGGTCTTGGAGACGACGGAGACTTACAAGATTTCTTTACTGGACTTGCCGATAATGATGACATCGACGATGAAATCAC
CTTCAGCAACCGCGTTCGTCTAAACCTTGACACTAGCTTTACTGGCAAAGACCGCCTGCGGACTCGTCTAGAAGCTGGTA
ACATCACTGCCTTTGATGATGCCACCGGTGTAGATTCTGCTCGCCTTGGCTTTGACACCGATAATGGTAATGACGTCGAG
ATCGGCAAATTATTCTACCGATTCCCCGTTGGTGATAACGTCACAGCTTATGTTGGTGCCGTAGGCATGGGAATTGACGA
TATTTTCGATGCCACCAGTCCTTATTTTGAAAGCAGCGGTAGTGGCGCTCTGTCTCGCTTTGGTCGCTTTAACCCCATCT
ACCGTGGCCCCGATGGCGCTGGTGCTGGTTTCAACTTTGACCTCGGCGAGAGATTTACTTTCTCCGCAGCTTACCTGGCA
GACGATGGCGATGTGAACAATCCCGAAGAAAAGAATGGTCTTTTTAACGGTAACTACACCGCAGGCGCTCAGCTCGATTT
CAAACCGGCTGATGACATTATGTTCTCTGCCTTCTATGCCAACCGCTACCAAAAAGCGGGCGATGTTAACTTGAGTGGTA
GCACTGGCAGCGTCATTGCTAACGACCCCACCTTTAACTCCCTGGCTGTTTCTTCTAACAACTTTGGTTTACAAGGTAGC
TGGCTAATTGGTGACAAATTCAACCTTGGCGGTTGGGTTGGTTACACTACCGCAGACATCGAAGATCCCAATGTCACTGG
TAACTTTGATGTTTGGAACTGGGCTGTCAACGCAGCTTTACTTGATGTCGGTGGCGAAGGTAATGTCCTTGGTCTGATCT
TCGGTCAAACACCTAAGCTGACTAGCGGTAACATCGACTTCGGTCAAATTGAAGTGAACTACAACGATGACAGCGACAGC
AGCTATCTCGCTGAACTTCAGTATCGCTACAAGCTCAACGACAACATCACCATTACTCCCGGTGCTTATGTCGTATTCAA
CCCCAACCAAAATGACGATAATGACACTGTTGTTGTGGGTTCTGTACGTACTACCTTTAGCTTCTAA

Upstream 100 bases:

>100_bases
CGTTTTGAAAATGATTTGCAGTAATAAAACATGCTTATCAATAACATAAATGCCCAAGCTCAAAGTCAAAAAATATCTCA
GGTGTGAGGTTCAATCGAAT

Downstream 100 bases:

>100_bases
GGCTGAAAAAAAACAAGTCTAATTCCTCACACATATTGCTTCTAAAAGCGAAAAATTAGTCCTGAAAGTGAGTCAATTTT
GGCTCACTTTTTCTTTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MSKTVRTFLSGASVALGATVAFSGTAQANTELLDQINSYSQDDIAQVNSVFQLSDVSPSDWAFDALRNLVENYNCIVGYP
DGTFRGSRPLSRYEFAAGLNACLQQIERMIQSGTSEVTPEDLAALRRLVNEFEAELATLGARVDDLEGRVEFLEDNQFST
TTKLGGEVIFNLGGAFGEEKASPLALDSIEFPGGDFDPETVTFEELFDVVDYQDISSEERELLKEFFVGLGIDEDALGFS
FGLGDDGDLQDFFTGLADNDDIDDEITFSNRVRLNLDTSFTGKDRLRTRLEAGNITAFDDATGVDSARLGFDTDNGNDVE
IGKLFYRFPVGDNVTAYVGAVGMGIDDIFDATSPYFESSGSGALSRFGRFNPIYRGPDGAGAGFNFDLGERFTFSAAYLA
DDGDVNNPEEKNGLFNGNYTAGAQLDFKPADDIMFSAFYANRYQKAGDVNLSGSTGSVIANDPTFNSLAVSSNNFGLQGS
WLIGDKFNLGGWVGYTTADIEDPNVTGNFDVWNWAVNAALLDVGGEGNVLGLIFGQTPKLTSGNIDFGQIEVNYNDDSDS
SYLAELQYRYKLNDNITITPGAYVVFNPNQNDDNDTVVVGSVRTTFSF

Sequences:

>Translated_608_residues
MSKTVRTFLSGASVALGATVAFSGTAQANTELLDQINSYSQDDIAQVNSVFQLSDVSPSDWAFDALRNLVENYNCIVGYP
DGTFRGSRPLSRYEFAAGLNACLQQIERMIQSGTSEVTPEDLAALRRLVNEFEAELATLGARVDDLEGRVEFLEDNQFST
TTKLGGEVIFNLGGAFGEEKASPLALDSIEFPGGDFDPETVTFEELFDVVDYQDISSEERELLKEFFVGLGIDEDALGFS
FGLGDDGDLQDFFTGLADNDDIDDEITFSNRVRLNLDTSFTGKDRLRTRLEAGNITAFDDATGVDSARLGFDTDNGNDVE
IGKLFYRFPVGDNVTAYVGAVGMGIDDIFDATSPYFESSGSGALSRFGRFNPIYRGPDGAGAGFNFDLGERFTFSAAYLA
DDGDVNNPEEKNGLFNGNYTAGAQLDFKPADDIMFSAFYANRYQKAGDVNLSGSTGSVIANDPTFNSLAVSSNNFGLQGS
WLIGDKFNLGGWVGYTTADIEDPNVTGNFDVWNWAVNAALLDVGGEGNVLGLIFGQTPKLTSGNIDFGQIEVNYNDDSDS
SYLAELQYRYKLNDNITITPGAYVVFNPNQNDDNDTVVVGSVRTTFSF
>Mature_607_residues
SKTVRTFLSGASVALGATVAFSGTAQANTELLDQINSYSQDDIAQVNSVFQLSDVSPSDWAFDALRNLVENYNCIVGYPD
GTFRGSRPLSRYEFAAGLNACLQQIERMIQSGTSEVTPEDLAALRRLVNEFEAELATLGARVDDLEGRVEFLEDNQFSTT
TKLGGEVIFNLGGAFGEEKASPLALDSIEFPGGDFDPETVTFEELFDVVDYQDISSEERELLKEFFVGLGIDEDALGFSF
GLGDDGDLQDFFTGLADNDDIDDEITFSNRVRLNLDTSFTGKDRLRTRLEAGNITAFDDATGVDSARLGFDTDNGNDVEI
GKLFYRFPVGDNVTAYVGAVGMGIDDIFDATSPYFESSGSGALSRFGRFNPIYRGPDGAGAGFNFDLGERFTFSAAYLAD
DGDVNNPEEKNGLFNGNYTAGAQLDFKPADDIMFSAFYANRYQKAGDVNLSGSTGSVIANDPTFNSLAVSSNNFGLQGSW
LIGDKFNLGGWVGYTTADIEDPNVTGNFDVWNWAVNAALLDVGGEGNVLGLIFGQTPKLTSGNIDFGQIEVNYNDDSDSS
YLAELQYRYKLNDNITITPGAYVVFNPNQNDDNDTVVVGSVRTTFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 65915; Mature: 65784

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTVRTFLSGASVALGATVAFSGTAQANTELLDQINSYSQDDIAQVNSVFQLSDVSPSD
CCHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHEEEECCCCCCH
WAFDALRNLVENYNCIVGYPDGTFRGSRPLSRYEFAAGLNACLQQIERMIQSGTSEVTPE
HHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DLAALRRLVNEFEAELATLGARVDDLEGRVEFLEDNQFSTTTKLGGEVIFNLGGAFGEEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHCCCEEEEECCCCCCCCC
ASPLALDSIEFPGGDFDPETVTFEELFDVVDYQDISSEERELLKEFFVGLGIDEDALGFS
CCCEEEECEECCCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
FGLGDDGDLQDFFTGLADNDDIDDEITFSNRVRLNLDTSFTGKDRLRTRLEAGNITAFDD
ECCCCCCCHHHHHHCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
ATGVDSARLGFDTDNGNDVEIGKLFYRFPVGDNVTAYVGAVGMGIDDIFDATSPYFESSG
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEHHHCCCHHHHHCCCCCCCCCCC
SGALSRFGRFNPIYRGPDGAGAGFNFDLGERFTFSAAYLADDGDVNNPEEKNGLFNGNYT
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCCC
AGAQLDFKPADDIMFSAFYANRYQKAGDVNLSGSTGSVIANDPTFNSLAVSSNNFGLQGS
CCCEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCEEEEECCCCCCEEE
WLIGDKFNLGGWVGYTTADIEDPNVTGNFDVWNWAVNAALLDVGGEGNVLGLIFGQTPKL
EEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHEEEEEEEEEECCCCCEEEEEECCCCCC
TSGNIDFGQIEVNYNDDSDSSYLAELQYRYKLNDNITITPGAYVVFNPNQNDDNDTVVVG
CCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCEEECCCEEEEECCCCCCCCCEEEEE
SVRTTFSF
EEEEECCC
>Mature Secondary Structure 
SKTVRTFLSGASVALGATVAFSGTAQANTELLDQINSYSQDDIAQVNSVFQLSDVSPSD
CHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHEEEECCCCCCH
WAFDALRNLVENYNCIVGYPDGTFRGSRPLSRYEFAAGLNACLQQIERMIQSGTSEVTPE
HHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DLAALRRLVNEFEAELATLGARVDDLEGRVEFLEDNQFSTTTKLGGEVIFNLGGAFGEEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHCCCEEEEECCCCCCCCC
ASPLALDSIEFPGGDFDPETVTFEELFDVVDYQDISSEERELLKEFFVGLGIDEDALGFS
CCCEEEECEECCCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
FGLGDDGDLQDFFTGLADNDDIDDEITFSNRVRLNLDTSFTGKDRLRTRLEAGNITAFDD
ECCCCCCCHHHHHHCCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
ATGVDSARLGFDTDNGNDVEIGKLFYRFPVGDNVTAYVGAVGMGIDDIFDATSPYFESSG
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEHHHCCCHHHHHCCCCCCCCCCC
SGALSRFGRFNPIYRGPDGAGAGFNFDLGERFTFSAAYLADDGDVNNPEEKNGLFNGNYT
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCCC
AGAQLDFKPADDIMFSAFYANRYQKAGDVNLSGSTGSVIANDPTFNSLAVSSNNFGLQGS
CCCEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCEEEEECCCCCCEEE
WLIGDKFNLGGWVGYTTADIEDPNVTGNFDVWNWAVNAALLDVGGEGNVLGLIFGQTPKL
EEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHEEEEEEEEEECCCCCEEEEEECCCCCC
TSGNIDFGQIEVNYNDDSDSSYLAELQYRYKLNDNITITPGAYVVFNPNQNDDNDTVVVG
CCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCEEECCCEEEEECCCCCCCCCEEEEE
SVRTTFSF
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 2507869 [H]