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The map label for this gene is trkA [H]

Identifier: 170077625

GI number: 170077625

Start: 1036824

End: 1037504

Strand: Reverse

Name: trkA [H]

Synonym: SYNPCC7002_A1004

Alternate gene names: 170077625

Gene position: 1037504-1036824 (Counterclockwise)

Preceding gene: 170077626

Following gene: 170077623

Centisome position: 34.49

GC content: 52.57

Gene sequence:

>681_bases
ATGTACGTTTTAATCGGTGGTGCCGGGATGATGGGACGAGATCTCGCCAAAACCCTCCAGCGGATGAACCACACCGTGGC
GATCATTGATACCGATGCCGCCGCCTGTCAGGATGCCCGCGAAAAAATTGGTGTCATGGCCTTTGAAGGAAGTGCCGTTA
AAACCAGTGTCCTCATCGAAGCTGGCATCCGCAAAGCCAACGCCGTCATTGCCACGCTCCGAGACGATGCTCTCAATCTG
GCCTTGGTAACTCTCTGCAAACACTATGGTGTCCCGCAAATCATTGTCCGGATGCGCGATCGCGACTTTATCGAGCCCTA
CAAACTCGCGGGGGCAACCCACATTATCAGCACCACAGAACTGGCCCTCAATCGCGTGGTCAATGCCATCGAATATCCCG
AAGTCGATGCGATGATGCATTTTGAGCAGGGTCAAATCGAAGTTTTAAAGCTCTCGATTCCTGAAAATTGCGCCATTGTT
GGCCGGAGCGTCGCGGAATTAGCCCAGGATCATCGGTTTCCTGCCGGGACATTGGTGATTGGCTACCAAGCGCACCCCCA
CGAAGAATTACAAATCCCCAACGGCAGTACACTCCTAGAAAGCGGTTCGACAATCCTAGCTGTCACCAAACCAGAACTGG
TACACCAATTAGTGGACTTTATGGGGTTATGTGTTGCCTAG

Upstream 100 bases:

>100_bases
GCCAAAGACTTCCGCTGTGGCCATTGCGATCGCTGTCAGAACTCTTCATGATCAAGGCAAAAGGCGATCGCCTTTTTTCC
AGTTACCAAGGAGAAACCCC

Downstream 100 bases:

>100_bases
GGATCTCGCAGGGCCAGAATTTTTTGGTTTAACTCCTGTAAGTACGGCCGGGCCGTCTCATCACTAATTAAGCCCTTGAG
AATTGCTTCGTTAATGGCAC

Product: K+ transport system NAD-binding component, TrkA

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MYVLIGGAGMMGRDLAKTLQRMNHTVAIIDTDAAACQDAREKIGVMAFEGSAVKTSVLIEAGIRKANAVIATLRDDALNL
ALVTLCKHYGVPQIIVRMRDRDFIEPYKLAGATHIISTTELALNRVVNAIEYPEVDAMMHFEQGQIEVLKLSIPENCAIV
GRSVAELAQDHRFPAGTLVIGYQAHPHEELQIPNGSTLLESGSTILAVTKPELVHQLVDFMGLCVA

Sequences:

>Translated_226_residues
MYVLIGGAGMMGRDLAKTLQRMNHTVAIIDTDAAACQDAREKIGVMAFEGSAVKTSVLIEAGIRKANAVIATLRDDALNL
ALVTLCKHYGVPQIIVRMRDRDFIEPYKLAGATHIISTTELALNRVVNAIEYPEVDAMMHFEQGQIEVLKLSIPENCAIV
GRSVAELAQDHRFPAGTLVIGYQAHPHEELQIPNGSTLLESGSTILAVTKPELVHQLVDFMGLCVA
>Mature_226_residues
MYVLIGGAGMMGRDLAKTLQRMNHTVAIIDTDAAACQDAREKIGVMAFEGSAVKTSVLIEAGIRKANAVIATLRDDALNL
ALVTLCKHYGVPQIIVRMRDRDFIEPYKLAGATHIISTTELALNRVVNAIEYPEVDAMMHFEQGQIEVLKLSIPENCAIV
GRSVAELAQDHRFPAGTLVIGYQAHPHEELQIPNGSTLLESGSTILAVTKPELVHQLVDFMGLCVA

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=215, Percent_Identity=23.2558139534884, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24514; Mature: 24514

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVLIGGAGMMGRDLAKTLQRMNHTVAIIDTDAAACQDAREKIGVMAFEGSAVKTSVLIE
CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCEEEECCCCHHHHHHHH
AGIRKANAVIATLRDDALNLALVTLCKHYGVPQIIVRMRDRDFIEPYKLAGATHIISTTE
HCCCHHHEEEEEECCCHHHHHHHHHHHHCCCHHHHHEECCCCCCCHHHHCCCHHHHHHHH
LALNRVVNAIEYPEVDAMMHFEQGQIEVLKLSIPENCAIVGRSVAELAQDHRFPAGTLVI
HHHHHHHHHHCCCCCHHEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE
GYQAHPHEELQIPNGSTLLESGSTILAVTKPELVHQLVDFMGLCVA
EEECCCCCEEECCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYVLIGGAGMMGRDLAKTLQRMNHTVAIIDTDAAACQDAREKIGVMAFEGSAVKTSVLIE
CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCEEEECCCCHHHHHHHH
AGIRKANAVIATLRDDALNLALVTLCKHYGVPQIIVRMRDRDFIEPYKLAGATHIISTTE
HCCCHHHEEEEEECCCHHHHHHHHHHHHCCCHHHHHEECCCCCCCHHHHCCCHHHHHHHH
LALNRVVNAIEYPEVDAMMHFEQGQIEVLKLSIPENCAIVGRSVAELAQDHRFPAGTLVI
HHHHHHHHHHCCCCCHHEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE
GYQAHPHEELQIPNGSTLLESGSTILAVTKPELVHQLVDFMGLCVA
EEECCCCCEEECCCCCEEECCCCEEEEEECHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]