| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is pntA [H]
Identifier: 170077607
GI number: 170077607
Start: 1013769
End: 1014914
Strand: Reverse
Name: pntA [H]
Synonym: SYNPCC7002_A0986
Alternate gene names: 170077607
Gene position: 1014914-1013769 (Counterclockwise)
Preceding gene: 170077623
Following gene: 170077606
Centisome position: 33.74
GC content: 54.45
Gene sequence:
>1146_bases ATGAAAATTGCTGTTGCTCGGGAAACCGTTGCCGGAGAACGTCGGGTAGCCCTGACACCGGATCAGGTTTCTCGTCTTGT TAAAAAAGGCTGGGAAATCCATGTGGAGGCCGGGGCTGGTGAGGCATCTCTCCTTCCCGATGCTGCCTATGAGGAAGCTG GGGCAAAAGTCGTTGGCGATCGTCAATCCCTCTGGAAAGAGGCTGATCTCCTCGTCAAGGTGGCTGTACCCACAGAAGAA GAGGTTGCCCTCCTGCCGGAAGGGTCAATGGTGGCGAGTTTGCTCAATCCCCTGGGACAACCAGAGATTATTCAAAAATT AGCAGATAAAAAGATAACCGCCTTGGGCATGGAGTTGATCCCCCGCACCAGTCGCGCCCAAAGTATGGATGTGTTGTCTT CCCAGGCTGGGGTGGCTGGCTACAAAGCGGTTTTACTTGCTGCCGCTGCCCTACCCAAGTTTTTCCCAATGTTAACCACA GCCGCTGGCACCATTCGTCCAGCTAAGGTGTTTGTGATTGGAGCTGGGGTAGCGGGTCTCCAGGCGATCGCCACAGCCAG AAGACTCGGCGCGGTAGTCGAGGCCTTTGACATCCGGCCCGCCGTCAAAGAAGAAGTCCAAAGTCTCGGCGCTAAATTTG TCGAAGTGCAACTAGAAGAAGAAACTGCAACGGCCGGTGGCTACGCCAAGGAAGTTTCCGAAGACTCGAAAAAGAAAAGC CAAGCCCTCATTTCAGACCATGTGGCCACCGCCGATGTGGTGATCACCACCGCCCAAGTTCCCGGTCGCCGCGCCCCCGT ACTTGTAACCGATGACATGATTGCCCGGATGCAAACCGGATCGGTTTTGATCGATCTCGCCGGCGAACAAGGGGGTAACT GTGAAGGCTGTGAGGCAGGCCGCGAAGTCCAAGTCCACGGGGCCACGATCATTGCTCCCATTAATCTTCCTTCCACGGTG CCTGTCCATGCGAGCCAAATGTTTGCCAAGAATATGGCGACCTTGCTACAACTGCTCATTCCCGAAGACGCGATTAATCT CGATTTTGCCGATGACATCCTAGATTCCGTTTGTGTGACCCATCAAGGGGAAATTCGCAATCAACGGGTCAAAGACGCCC TGCAACAAATGGCTGTCACTGCCTAA
Upstream 100 bases:
>100_bases TATGGGGATGGCCGACGGCCCTGGGTTCTCAAGGTTTTGCCACTGAATTGCTCTACATCTACCGTTCAGTCTGTTGCTAT TGTTTCGTTAAGGAGTTTCT
Downstream 100 bases:
>100_bases GAAACAGACATTTTCTCAGTTTTGAACCTAAATTTATTCATCTTATCTAAAGGAGTTTTGACTGTTCATGACAACAGCAA CACTGCTCAGTAGCCTATTC
Product: nicotinamide nucleotide transhydrogenase, chain alpha, part 1
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKIAVARETVAGERRVALTPDQVSRLVKKGWEIHVEAGAGEASLLPDAAYEEAGAKVVGDRQSLWKEADLLVKVAVPTEE EVALLPEGSMVASLLNPLGQPEIIQKLADKKITALGMELIPRTSRAQSMDVLSSQAGVAGYKAVLLAAAALPKFFPMLTT AAGTIRPAKVFVIGAGVAGLQAIATARRLGAVVEAFDIRPAVKEEVQSLGAKFVEVQLEEETATAGGYAKEVSEDSKKKS QALISDHVATADVVITTAQVPGRRAPVLVTDDMIARMQTGSVLIDLAGEQGGNCEGCEAGREVQVHGATIIAPINLPSTV PVHASQMFAKNMATLLQLLIPEDAINLDFADDILDSVCVTHQGEIRNQRVKDALQQMAVTA
Sequences:
>Translated_381_residues MKIAVARETVAGERRVALTPDQVSRLVKKGWEIHVEAGAGEASLLPDAAYEEAGAKVVGDRQSLWKEADLLVKVAVPTEE EVALLPEGSMVASLLNPLGQPEIIQKLADKKITALGMELIPRTSRAQSMDVLSSQAGVAGYKAVLLAAAALPKFFPMLTT AAGTIRPAKVFVIGAGVAGLQAIATARRLGAVVEAFDIRPAVKEEVQSLGAKFVEVQLEEETATAGGYAKEVSEDSKKKS QALISDHVATADVVITTAQVPGRRAPVLVTDDMIARMQTGSVLIDLAGEQGGNCEGCEAGREVQVHGATIIAPINLPSTV PVHASQMFAKNMATLLQLLIPEDAINLDFADDILDSVCVTHQGEIRNQRVKDALQQMAVTA >Mature_381_residues MKIAVARETVAGERRVALTPDQVSRLVKKGWEIHVEAGAGEASLLPDAAYEEAGAKVVGDRQSLWKEADLLVKVAVPTEE EVALLPEGSMVASLLNPLGQPEIIQKLADKKITALGMELIPRTSRAQSMDVLSSQAGVAGYKAVLLAAAALPKFFPMLTT AAGTIRPAKVFVIGAGVAGLQAIATARRLGAVVEAFDIRPAVKEEVQSLGAKFVEVQLEEETATAGGYAKEVSEDSKKKS QALISDHVATADVVITTAQVPGRRAPVLVTDDMIARMQTGSVLIDLAGEQGGNCEGCEAGREVQVHGATIIAPINLPSTV PVHASQMFAKNMATLLQLLIPEDAINLDFADDILDSVCVTHQGEIRNQRVKDALQQMAVTA
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=361, Percent_Identity=40.9972299168975, Blast_Score=262, Evalue=5e-70, Organism=Homo sapiens, GI122939153, Length=361, Percent_Identity=40.9972299168975, Blast_Score=262, Evalue=5e-70, Organism=Escherichia coli, GI1787887, Length=368, Percent_Identity=43.2065217391304, Blast_Score=305, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17550456, Length=366, Percent_Identity=39.8907103825137, Blast_Score=272, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR016040 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 40191; Mature: 40191
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVARETVAGERRVALTPDQVSRLVKKGWEIHVEAGAGEASLLPDAAYEEAGAKVVGD CEEEEEHHHHCCCCEEEECHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCEEECC RQSLWKEADLLVKVAVPTEEEVALLPEGSMVASLLNPLGQPEIIQKLADKKITALGMELI HHHHHHHCCEEEEEECCCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC PRTSRAQSMDVLSSQAGVAGYKAVLLAAAALPKFFPMLTTAAGTIRPAKVFVIGAGVAGL CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHH QAIATARRLGAVVEAFDIRPAVKEEVQSLGAKFVEVQLEEETATAGGYAKEVSEDSKKKS HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH QALISDHVATADVVITTAQVPGRRAPVLVTDDMIARMQTGSVLIDLAGEQGGNCEGCEAG HHHHHHCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCC REVQVHGATIIAPINLPSTVPVHASQMFAKNMATLLQLLIPEDAINLDFADDILDSVCVT CEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC HQGEIRNQRVKDALQQMAVTA CCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIAVARETVAGERRVALTPDQVSRLVKKGWEIHVEAGAGEASLLPDAAYEEAGAKVVGD CEEEEEHHHHCCCCEEEECHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCEEECC RQSLWKEADLLVKVAVPTEEEVALLPEGSMVASLLNPLGQPEIIQKLADKKITALGMELI HHHHHHHCCEEEEEECCCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC PRTSRAQSMDVLSSQAGVAGYKAVLLAAAALPKFFPMLTTAAGTIRPAKVFVIGAGVAGL CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHH QAIATARRLGAVVEAFDIRPAVKEEVQSLGAKFVEVQLEEETATAGGYAKEVSEDSKKKS HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH QALISDHVATADVVITTAQVPGRRAPVLVTDDMIARMQTGSVLIDLAGEQGGNCEGCEAG HHHHHHCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCC REVQVHGATIIAPINLPSTVPVHASQMFAKNMATLLQLLIPEDAINLDFADDILDSVCVT CEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC HQGEIRNQRVKDALQQMAVTA CCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]