| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077527
Identifier: 170077527
GI number: 170077527
Start: 938380
End: 939150
Strand: Direct
Name: 170077527
Synonym: SYNPCC7002_A0905
Alternate gene names: NA
Gene position: 938380-939150 (Clockwise)
Preceding gene: 170077526
Following gene: 170077529
Centisome position: 31.2
GC content: 56.42
Gene sequence:
>771_bases ATGAGTGATCCTGAGGCCCTCAAACAGTTACTCGAAGCGGTGGCCCAGGGGGTAGTTAGTCCCCAAAATGCGCTGACAGA GCTGAAGCATTTGACCTTTGAAGCTGTGGGTGACTTTGCCAAAATTGACCACCACCGCCAACTGCGCACGGGCTTTCCGG AAGTGATCTGGGGGCCAGGGAAAACGCCGGATCACATTGCCCAAATTATGCAAACGATGGGCGATCGCCACCCGGTTGTC ATGGCTACCCGCATTGATGTGGAGACCTACCACCAACTGCAGCCCAAGGTACATAACCTCACCTATTTCCCCGAAGCCCG CATTTGTGCCCTCATCCAGGCACCGCCCCAGGTACGCCATCGGGGTACGATTTCGATCTTGACCGCTGGCACCGCTGATC TCCCCGTAGCCGAAGAAGCGGCTGTCACCGCAGAATTATCGGGTTTTGCGGTAAATCGCCTTTGGGATGTGGGGGTGGCC GGAATTCATCGCCTTTTAAGTCATCGCCATGTGATCGAGCAAGCAGACGTTCTGATTACGGTGGCGGGCATGGAGGGCGC TTTGCCTAGCGTGGTGGCAGGTTTGGCCGATTGCCCTGTGATTGCGGTGCCCACCAGTGTTGGCTATGGAGTGAGTTTTG GGGGCGTTTCTGCTCTCCTGACCATGCTTAATTCCTGTGCGGCGGGCATCGGTGTGATGAATATTGATAATGGCTTTGGG GCGGCGATCTTGGCGGGACAAATTTTGCGGACGGCGGCAAGGTTACGCTAG
Upstream 100 bases:
>100_bases TCTTCCCTTGATGGTCGGCTATGTGCTCCAGCGGCTCAATGGCCAAAAATGGTTGGTTCTCAACTAAGGCGCGGCGCAAT CTGCACCGACAAGGTTATCC
Downstream 100 bases:
>100_bases AGGGTCAAACGCAACAGTGAAAAATCGTCTTCGAGGTGATTTTGGTGCAGGCGATCGCCAATGCTTTTGACCAGAGGCTG GAGAGAAGTGCCTTGGAACC
Product: NCAIR mutase (PurE)-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSDPEALKQLLEAVAQGVVSPQNALTELKHLTFEAVGDFAKIDHHRQLRTGFPEVIWGPGKTPDHIAQIMQTMGDRHPVV MATRIDVETYHQLQPKVHNLTYFPEARICALIQAPPQVRHRGTISILTAGTADLPVAEEAAVTAELSGFAVNRLWDVGVA GIHRLLSHRHVIEQADVLITVAGMEGALPSVVAGLADCPVIAVPTSVGYGVSFGGVSALLTMLNSCAAGIGVMNIDNGFG AAILAGQILRTAARLR
Sequences:
>Translated_256_residues MSDPEALKQLLEAVAQGVVSPQNALTELKHLTFEAVGDFAKIDHHRQLRTGFPEVIWGPGKTPDHIAQIMQTMGDRHPVV MATRIDVETYHQLQPKVHNLTYFPEARICALIQAPPQVRHRGTISILTAGTADLPVAEEAAVTAELSGFAVNRLWDVGVA GIHRLLSHRHVIEQADVLITVAGMEGALPSVVAGLADCPVIAVPTSVGYGVSFGGVSALLTMLNSCAAGIGVMNIDNGFG AAILAGQILRTAARLR >Mature_255_residues SDPEALKQLLEAVAQGVVSPQNALTELKHLTFEAVGDFAKIDHHRQLRTGFPEVIWGPGKTPDHIAQIMQTMGDRHPVVM ATRIDVETYHQLQPKVHNLTYFPEARICALIQAPPQVRHRGTISILTAGTADLPVAEEAAVTAELSGFAVNRLWDVGVAG IHRLLSHRHVIEQADVLITVAGMEGALPSVVAGLADCPVIAVPTSVGYGVSFGGVSALLTMLNSCAAGIGVMNIDNGFGA AILAGQILRTAARLR
Specific function: Unknown
COG id: COG1691
COG function: function code R; NCAIR mutase (PurE)-related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: NA
Molecular weight: Translated: 27192; Mature: 27061
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPEALKQLLEAVAQGVVSPQNALTELKHLTFEAVGDFAKIDHHRQLRTGFPEVIWGPG CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC KTPDHIAQIMQTMGDRHPVVMATRIDVETYHQLQPKVHNLTYFPEARICALIQAPPQVRH CCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCHHHCEEECCCHHHHEEECCCHHHHC RGTISILTAGTADLPVAEEAAVTAELSGFAVNRLWDVGVAGIHRLLSHRHVIEQADVLIT CCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VAGMEGALPSVVAGLADCPVIAVPTSVGYGVSFGGVSALLTMLNSCAAGIGVMNIDNGFG EECCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC AAILAGQILRTAARLR HHHHHHHHHHHHHHCC >Mature Secondary Structure SDPEALKQLLEAVAQGVVSPQNALTELKHLTFEAVGDFAKIDHHRQLRTGFPEVIWGPG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC KTPDHIAQIMQTMGDRHPVVMATRIDVETYHQLQPKVHNLTYFPEARICALIQAPPQVRH CCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCHHHCEEECCCHHHHEEECCCHHHHC RGTISILTAGTADLPVAEEAAVTAELSGFAVNRLWDVGVAGIHRLLSHRHVIEQADVLIT CCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VAGMEGALPSVVAGLADCPVIAVPTSVGYGVSFGGVSALLTMLNSCAAGIGVMNIDNGFG EECCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC AAILAGQILRTAARLR HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]