| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077526
Identifier: 170077526
GI number: 170077526
Start: 937909
End: 938346
Strand: Direct
Name: 170077526
Synonym: SYNPCC7002_A0904
Alternate gene names: NA
Gene position: 937909-938346 (Clockwise)
Preceding gene: 170077523
Following gene: 170077527
Centisome position: 31.18
GC content: 47.95
Gene sequence:
>438_bases ATGGCAGAAACCACCGATCCCAAATCCAAAGCAGCCCCCGCCGCGAAAAAAAAGGAAAAGCCCCCCGCAGTAGAAGACAA ACCCTTTGCGGAGTTTATTGAGAATCACTTCCTCCCGGATCTACAAACTGCCCTCAAGGAAAATGGCATTGGGGACATGG GTCTCAAATTTATCGAAACGAATATTCCCATTAAAGGTTTAGAATCTCAAGCCTGCTGGCAGGTTCAAGGCAGTTGGCTC AACAACAAGCGGCAATTTATTCTTTATTTCATTGATGCAGACATCAAAGGCCAGAAAGCTTGGTCTTTTGCGACGGATGG CTCCCCCCACAGCACCCTAGAGTCTTTCATGATCGATGAACGCCGTGTGAATCTTCCCTTGATGGTCGGCTATGTGCTCC AGCGGCTCAATGGCCAAAAATGGTTGGTTCTCAACTAA
Upstream 100 bases:
>100_bases CCATTGTGCCACGTCCCCCACGCTAAACTTGGATATGCTTAAATGAAAAAGAGCAAAAACCCTTTGCCTTTCGTGAACCC CCTCAACTTTTCGGCAGACT
Downstream 100 bases:
>100_bases GGCGCGGCGCAATCTGCACCGACAAGGTTATCCATGAGTGATCCTGAGGCCCTCAAACAGTTACTCGAAGCGGTGGCCCA GGGGGTAGTTAGTCCCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAETTDPKSKAAPAAKKKEKPPAVEDKPFAEFIENHFLPDLQTALKENGIGDMGLKFIETNIPIKGLESQACWQVQGSWL NNKRQFILYFIDADIKGQKAWSFATDGSPHSTLESFMIDERRVNLPLMVGYVLQRLNGQKWLVLN
Sequences:
>Translated_145_residues MAETTDPKSKAAPAAKKKEKPPAVEDKPFAEFIENHFLPDLQTALKENGIGDMGLKFIETNIPIKGLESQACWQVQGSWL NNKRQFILYFIDADIKGQKAWSFATDGSPHSTLESFMIDERRVNLPLMVGYVLQRLNGQKWLVLN >Mature_144_residues AETTDPKSKAAPAAKKKEKPPAVEDKPFAEFIENHFLPDLQTALKENGIGDMGLKFIETNIPIKGLESQACWQVQGSWLN NKRQFILYFIDADIKGQKAWSFATDGSPHSTLESFMIDERRVNLPLMVGYVLQRLNGQKWLVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16392; Mature: 16261
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETTDPKSKAAPAAKKKEKPPAVEDKPFAEFIENHFLPDLQTALKENGIGDMGLKFIET CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEC NIPIKGLESQACWQVQGSWLNNKRQFILYFIDADIKGQKAWSFATDGSPHSTLESFMIDE CCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHC RRVNLPLMVGYVLQRLNGQKWLVLN CCCCCHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure AETTDPKSKAAPAAKKKEKPPAVEDKPFAEFIENHFLPDLQTALKENGIGDMGLKFIET CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEC NIPIKGLESQACWQVQGSWLNNKRQFILYFIDADIKGQKAWSFATDGSPHSTLESFMIDE CCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHC RRVNLPLMVGYVLQRLNGQKWLVLN CCCCCHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA