Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077422

Identifier: 170077422

GI number: 170077422

Start: 828286

End: 829080

Strand: Direct

Name: 170077422

Synonym: SYNPCC7002_A0800

Alternate gene names: NA

Gene position: 828286-829080 (Clockwise)

Preceding gene: 170077421

Following gene: 170077423

Centisome position: 27.54

GC content: 49.69

Gene sequence:

>795_bases
ATGGCAAAATCTGTCCAAGCTCCCAAAGTGCCAGAAATCATCACAGAGTTAACCGAAAACAATTTTTTCTTTCGGGGAAT
GGATCCAGATGCACTGCAAAATTGGCTTGATCCAGCAGAATTAATCACTGAGAAACTCTATTCCAGTCGGCCGATCTATA
CAGCTTTTCGCCCGAACCACAATTTGGAATTTCTCTACGTGTTACTTGCGGGGGGGCCAGTGATTGTGCGGAGTACGCCC
CTCGACCGCATTCTAGCGATCACCTATACGGGCAGTTGTTTTGGGATGCGCAATCTTCCCGTTGGGTTTGGGCAGGTGAG
TCGGAGTTTTCCCAGTTTGGTGGAAGCCTACAAAACTACCGATGTGCTGAAAATTCCGGTAGCAACGGTACAACGGATCT
ATGACCAGAGTGCTGATTTTCGCGATCGCTATAACCTGAGTTTCGAGTTACGGGAAAAATTCCAGTACCATCTGCTGAAC
TGTAGTACCTACCCACCCCAGGCCGTCGCTTCCCTGCTGCGGGCTTTGATTTACCAAGAGCGATCGCTGGCCAATCAACC
CCAGAGTAATGGCGTTTTTAGCTTTGATCTCCCCGTAGATATCATTGCCCATGCCTGCCAGTTAAATCACCGCACTGTGG
AACAGGTGTTGAAGGGGATGACGAAGGTGGAACTGATCAAGACAGAAAAATCCGCTGAGGGACAAGGGGATCTGATCCAT
GTGCTGAATCCAGAAGGCCTCAAGGAAGTCTATAGTGCGACCCGGGATAAAGTGGCTTGGTGGCCATTGCGCTAG

Upstream 100 bases:

>100_bases
CTCACCCAGGGGCGATTGATGACTCGGTTACATCGAGCTTTTCGACTAGAATCAGAAGGAAACGCCTGTAGCTTCTGAAT
CTAATACGTTTGTAATTTCC

Downstream 100 bases:

>100_bases
GCGAGGGAGTCAACCATTGGGGCGATCGCCTAATCACCATTGAAAATCATCTATTTAGCCACCTAAAAATGAAAGGAATC
TTACGATTTGCGGCGGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Crp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNHNLEFLYVLLAGGPVIVRSTP
LDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTTDVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLN
CSTYPPQAVASLLRALIYQERSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH
VLNPEGLKEVYSATRDKVAWWPLR

Sequences:

>Translated_264_residues
MAKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNHNLEFLYVLLAGGPVIVRSTP
LDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTTDVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLN
CSTYPPQAVASLLRALIYQERSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH
VLNPEGLKEVYSATRDKVAWWPLR
>Mature_263_residues
AKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNHNLEFLYVLLAGGPVIVRSTPL
DRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTTDVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLNC
STYPPQAVASLLRALIYQERSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIHV
LNPEGLKEVYSATRDKVAWWPLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29969; Mature: 29838

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNH
CCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCC
NLEFLYVLLAGGPVIVRSTPLDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTT
CCEEEEEEEECCEEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
DVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLNCSTYPPQAVASLLRALIYQE
CEEECCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
RSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH
HHHHCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHCHHHEEEEECCCCCCCCCCEEE
VLNPEGLKEVYSATRDKVAWWPLR
EECCHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
AKSVQAPKVPEIITELTENNFFFRGMDPDALQNWLDPAELITEKLYSSRPIYTAFRPNH
CCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCC
NLEFLYVLLAGGPVIVRSTPLDRILAITYTGSCFGMRNLPVGFGQVSRSFPSLVEAYKTT
CCEEEEEEEECCEEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
DVLKIPVATVQRIYDQSADFRDRYNLSFELREKFQYHLLNCSTYPPQAVASLLRALIYQE
CEEECCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH
RSLANQPQSNGVFSFDLPVDIIAHACQLNHRTVEQVLKGMTKVELIKTEKSAEGQGDLIH
HHHHCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHCHHHEEEEECCCCCCCCCCEEE
VLNPEGLKEVYSATRDKVAWWPLR
EECCHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA