Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077286

Identifier: 170077286

GI number: 170077286

Start: 694432

End: 694914

Strand: Direct

Name: 170077286

Synonym: SYNPCC7002_A0663

Alternate gene names: NA

Gene position: 694432-694914 (Clockwise)

Preceding gene: 170077282

Following gene: 170077287

Centisome position: 23.09

GC content: 45.76

Gene sequence:

>483_bases
ATGCCTGAAGTAACAATTCCTGCCCACCAGACCGGTGACTTTCTTGTGGATTACGAAGAAAAAGTTTTTCCTGATGTCCA
AGCAGAGCCCGGCGAAAAAGCACTGATTACCTTTCATACAGTAGCCTTTGAAGGTTCCATTGGTTTAGTCAATTTATTAC
AAGCAAGTCGCCTCATCAAAAAAGGGTTTGAAACGTCTGTGCTACTTTATGGCCCTGGGGTAACTCTGGGGGTTCAGCGG
GGCTTTCCAAAACTCGGCGATGAAGGTTTTCCGGGGCACTTAGCCATGAATGATCGCCTGGTTAAGATTATGGAATCTGG
CGGAAAGGTCTATGCCTGTCGTTTTGCACTACAAGCTCTTTATGGCCACGGAGAACCTTCTTTGATTCCTGGTATCCGCC
CGATTAATCCCTTAGATGTGATGGATTTAATTTTAATGCACCGCAAAGAAGGGGCATTTATCCTTGACACCTGGACGATG
TAA

Upstream 100 bases:

>100_bases
TCTCCTTTTGTCAGCAATGATACAGGTCGCCTTGAATTCTCCCCTTACAGTAATGCACAACTCAACCCATTAAAACCTAA
AAACTAAAGGAAAATTTCCC

Downstream 100 bases:

>100_bases
AAACAAAGGTTTTACTTCCGAAAATTTCCAAAGAGTTCACAAGAACAACTTTTAGATTTTTTTTGCACTCTTTAAAAACT
TCCGAGTATTTTTTAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPEVTIPAHQTGDFLVDYEEKVFPDVQAEPGEKALITFHTVAFEGSIGLVNLLQASRLIKKGFETSVLLYGPGVTLGVQR
GFPKLGDEGFPGHLAMNDRLVKIMESGGKVYACRFALQALYGHGEPSLIPGIRPINPLDVMDLILMHRKEGAFILDTWTM

Sequences:

>Translated_160_residues
MPEVTIPAHQTGDFLVDYEEKVFPDVQAEPGEKALITFHTVAFEGSIGLVNLLQASRLIKKGFETSVLLYGPGVTLGVQR
GFPKLGDEGFPGHLAMNDRLVKIMESGGKVYACRFALQALYGHGEPSLIPGIRPINPLDVMDLILMHRKEGAFILDTWTM
>Mature_159_residues
PEVTIPAHQTGDFLVDYEEKVFPDVQAEPGEKALITFHTVAFEGSIGLVNLLQASRLIKKGFETSVLLYGPGVTLGVQRG
FPKLGDEGFPGHLAMNDRLVKIMESGGKVYACRFALQALYGHGEPSLIPGIRPINPLDVMDLILMHRKEGAFILDTWTM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17566; Mature: 17435

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVTIPAHQTGDFLVDYEEKVFPDVQAEPGEKALITFHTVAFEGSIGLVNLLQASRLIK
CCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH
KGFETSVLLYGPGVTLGVQRGFPKLGDEGFPGHLAMNDRLVKIMESGGKVYACRFALQAL
CCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHCCCCEEEHHHHHHHH
YGHGEPSLIPGIRPINPLDVMDLILMHRKEGAFILDTWTM
HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
PEVTIPAHQTGDFLVDYEEKVFPDVQAEPGEKALITFHTVAFEGSIGLVNLLQASRLIK
CCCCCCCCCCCCEEEECHHHHCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH
KGFETSVLLYGPGVTLGVQRGFPKLGDEGFPGHLAMNDRLVKIMESGGKVYACRFALQAL
CCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHCCCCEEEHHHHHHHH
YGHGEPSLIPGIRPINPLDVMDLILMHRKEGAFILDTWTM
HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA