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The map label for this gene is yhjB [C]

Identifier: 170077282

GI number: 170077282

Start: 690808

End: 691899

Strand: Direct

Name: yhjB [C]

Synonym: SYNPCC7002_A0659

Alternate gene names: 170077282

Gene position: 690808-691899 (Clockwise)

Preceding gene: 170077281

Following gene: 170077286

Centisome position: 22.97

GC content: 47.62

Gene sequence:

>1092_bases
GTGCTTGATTCTGCTTGCTTGATTGTTGATTTGCAAAAGGTTCAGCGCATTACCCAGGGCATTTCCGGTTGTCTGGAACC
AACGCTGATCGCCAAACGTTTAACCGAAGCATTGATTAAAGACTTTAATTGCGTCTTTGCGCGAATTTGGTTAACTGAGC
CAGATCAACGATCGCTCCGGTTGGTGGCCTCATCGGGTCTGTCTGAAAATATTAATGGCAGTTTTGCACGGGTTCCCATG
GGCGCCTATAAGGTCGGAAAAATTGCCAAAAATGGGATTCCTTTCCTGAGTAATCACCTGGCGGAAGAAGCTTGGGTAAA
AGACCATGACTGGGCGATCGCCAACGGAATTCAAGGTTTTGCGGGTTATCCCCTTGCCAGTCAACAGCGAATTATTGGTG
TGTTAGCGGCCTTTAGCCATGAAACTTTTTTACCAGAATTTTTAGAGGTTTTGCAGGTGCTATGTATGGCTGGGGCGATC
GCCTTAGATGCCGCCCAAAAAAGTCCCCAAGATCCCAGCAAAAGCCAGACAAGAGAATCTCACCCCCTCTCGGATCACCT
GGGCAGCCTTTTAAGTACCAGCCAGCTTAGTTTGATTGGTACGGAACGACCTCTGACACCAAGTTCGACCTATCTCTTAA
TCAAAACCGTAGAAATTCTCAATCAATTCAACTGTCACTATTGCCGACTCATCTACGGTGATACGGAAATTTGTCTCGAA
GGGATTATCGCCGCCCCTACCCCGACGAAAAACACAGGGCGATCGCCTTTTGCCGACATTGAATTTTTCGTACAAACCCT
TGGGGGGAACTGCGATGTCGGGATCAACGCCCAGGAAGCAGTTCACCAAATTCGCCTTACTTTGCCCTATGGAGCGACCA
CCCAAGTCTACAAATCAAAAGAATCACTATCCCAACGGGAACGTCAAGTTTTAGCGCTCCTCACCAAAGGGCTACGCGAT
CGCGACATTGCCCAGCAGCTCCACATCAGTGAAAGTACCGTAAAATTCCACCTAAACCGCACCTTGAGTAAACTACAAGC
TAAAAACCGCTACCAAGCTATTTACCAAGCCACAAAACAAGGTCTGATTTAA

Upstream 100 bases:

>100_bases
GATAATTGCGGGTTTCTGTACTAATGTTCACTACTGACTGACGTAGGTGAGCTGGCTCGCGTTAACTAGAAAGAGAATTT
GTGCTTAGTTTACCGATGCC

Downstream 100 bases:

>100_bases
ACGAGATCGCTAGTTCCACTATCCCCCAACAGCCGATCCAATTTCGGAGGATGTCGCCCAACATCTCGATCCGCTTGCCG
AATCAACAGAACGCGCTCCC

Product: two component sensor histidine kinase

Products: NA

Alternate protein names: PAS Fold Family; Hydrogenase-4 Transcriptional Activator; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator NifA Subfamily Fis Family; GAF Domain/Histidine Kinase Domain-Containing Protein; Two Component Sensor Histidine Kinase; GAF Sensor Protein; Protein Kinase

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLDSACLIVDLQKVQRITQGISGCLEPTLIAKRLTEALIKDFNCVFARIWLTEPDQRSLRLVASSGLSENINGSFARVPM
GAYKVGKIAKNGIPFLSNHLAEEAWVKDHDWAIANGIQGFAGYPLASQQRIIGVLAAFSHETFLPEFLEVLQVLCMAGAI
ALDAAQKSPQDPSKSQTRESHPLSDHLGSLLSTSQLSLIGTERPLTPSSTYLLIKTVEILNQFNCHYCRLIYGDTEICLE
GIIAAPTPTKNTGRSPFADIEFFVQTLGGNCDVGINAQEAVHQIRLTLPYGATTQVYKSKESLSQRERQVLALLTKGLRD
RDIAQQLHISESTVKFHLNRTLSKLQAKNRYQAIYQATKQGLI

Sequences:

>Translated_363_residues
MLDSACLIVDLQKVQRITQGISGCLEPTLIAKRLTEALIKDFNCVFARIWLTEPDQRSLRLVASSGLSENINGSFARVPM
GAYKVGKIAKNGIPFLSNHLAEEAWVKDHDWAIANGIQGFAGYPLASQQRIIGVLAAFSHETFLPEFLEVLQVLCMAGAI
ALDAAQKSPQDPSKSQTRESHPLSDHLGSLLSTSQLSLIGTERPLTPSSTYLLIKTVEILNQFNCHYCRLIYGDTEICLE
GIIAAPTPTKNTGRSPFADIEFFVQTLGGNCDVGINAQEAVHQIRLTLPYGATTQVYKSKESLSQRERQVLALLTKGLRD
RDIAQQLHISESTVKFHLNRTLSKLQAKNRYQAIYQATKQGLI
>Mature_363_residues
MLDSACLIVDLQKVQRITQGISGCLEPTLIAKRLTEALIKDFNCVFARIWLTEPDQRSLRLVASSGLSENINGSFARVPM
GAYKVGKIAKNGIPFLSNHLAEEAWVKDHDWAIANGIQGFAGYPLASQQRIIGVLAAFSHETFLPEFLEVLQVLCMAGAI
ALDAAQKSPQDPSKSQTRESHPLSDHLGSLLSTSQLSLIGTERPLTPSSTYLLIKTVEILNQFNCHYCRLIYGDTEICLE
GIIAAPTPTKNTGRSPFADIEFFVQTLGGNCDVGINAQEAVHQIRLTLPYGATTQVYKSKESLSQRERQVLALLTKGLRD
RDIAQQLHISESTVKFHLNRTLSKLQAKNRYQAIYQATKQGLI

Specific function: Unknown

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40034; Mature: 40034

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSACLIVDLQKVQRITQGISGCLEPTLIAKRLTEALIKDFNCVFARIWLTEPDQRSLR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHH
LVASSGLSENINGSFARVPMGAYKVGKIAKNGIPFLSNHLAEEAWVKDHDWAIANGIQGF
HHHHCCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCCC
AGYPLASQQRIIGVLAAFSHETFLPEFLEVLQVLCMAGAIALDAAQKSPQDPSKSQTRES
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
HPLSDHLGSLLSTSQLSLIGTERPLTPSSTYLLIKTVEILNQFNCHYCRLIYGDTEICLE
CCHHHHHHHHHHHCHHEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCHHHHHH
GIIAAPTPTKNTGRSPFADIEFFVQTLGGNCDVGINAQEAVHQIRLTLPYGATTQVYKSK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCHHHHHHH
ESLSQRERQVLALLTKGLRDRDIAQQLHISESTVKFHLNRTLSKLQAKNRYQAIYQATKQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLI
CCC
>Mature Secondary Structure
MLDSACLIVDLQKVQRITQGISGCLEPTLIAKRLTEALIKDFNCVFARIWLTEPDQRSLR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHH
LVASSGLSENINGSFARVPMGAYKVGKIAKNGIPFLSNHLAEEAWVKDHDWAIANGIQGF
HHHHCCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCCC
AGYPLASQQRIIGVLAAFSHETFLPEFLEVLQVLCMAGAIALDAAQKSPQDPSKSQTRES
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
HPLSDHLGSLLSTSQLSLIGTERPLTPSSTYLLIKTVEILNQFNCHYCRLIYGDTEICLE
CCHHHHHHHHHHHCHHEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCHHHHHH
GIIAAPTPTKNTGRSPFADIEFFVQTLGGNCDVGINAQEAVHQIRLTLPYGATTQVYKSK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCHHHHHHH
ESLSQRERQVLALLTKGLRDRDIAQQLHISESTVKFHLNRTLSKLQAKNRYQAIYQATKQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA