| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077273
Identifier: 170077273
GI number: 170077273
Start: 681001
End: 681483
Strand: Reverse
Name: 170077273
Synonym: SYNPCC7002_A0650
Alternate gene names: NA
Gene position: 681483-681001 (Counterclockwise)
Preceding gene: 170077274
Following gene: 170077272
Centisome position: 22.66
GC content: 44.31
Gene sequence:
>483_bases ATGGTGCTATCTATCAAAAGCCGATGCCCAAAGGGGAAACATAGTCGTCTTCAGTTAAAACTCAGCAATCATATCAATGC TGTTACTGAAACAACTCAACTTGCCTATGCCTTTCCAGAATTGTGCTGTAGCTTTGGCGATCGCTCCATTGTTCCTGATA TTGCGGTGTTTCAATGGTCACGCATCCCATTGGAAGCAGATGGCGAAGTCCCAGATAATTTTCTGCTGTGTCCAGATTGG ACAATTGAAATTCTTTCCCCTGAACAAAGCCCTAACCGAGTCACTGGCAATATTTTGTACTGCTTAGAGCATGGCTGTCA GTTGGGGTGGCTTATTGATCCAGGCGATCGATCAATTCTAATTTTTCAGCCTAATCAACAACCACAACTGCTCACGCAAG AAGATGCACTCAAGATTCTACCGAATATTCCCTTAACCTTGACCGCCGCTGAGGTGTTTAGTTGGCTAAAAATGGGGTCA TGA
Upstream 100 bases:
>100_bases ACCGACTGTCTGAGAAATGGAAGTCAAATAATTCATAATTTAATCATCCAAGAACAAATAGAAACAATACCAAATCGTCT CGATGATTTAATTAAAGTCA
Downstream 100 bases:
>100_bases TTATTTTCTGATGTTTGATTTGAAGATAAAATAGTTTTCCATAAAAATTTTCAACCTTCATCAAAAGTGAGTGCTAAGTT ATTAAAGCCTGGTCTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWSRIPLEADGEVPDNFLLCPDW TIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSILIFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS
Sequences:
>Translated_160_residues MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWSRIPLEADGEVPDNFLLCPDW TIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSILIFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS >Mature_160_residues MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWSRIPLEADGEVPDNFLLCPDW TIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSILIFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17930; Mature: 17930
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWS CEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC RIPLEADGEVPDNFLLCPDWTIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSIL CCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEECCEEEEECCCCEEEEEECCCCCEEE IFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS EECCCCCCCEECCCCHHHHCCCCCEEEEHHHHHHHHHCCC >Mature Secondary Structure MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWS CEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC RIPLEADGEVPDNFLLCPDWTIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSIL CCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEECCEEEEECCCCEEEEEECCCCCEEE IFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS EECCCCCCCEECCCCHHHHCCCCCEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA