Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077273

Identifier: 170077273

GI number: 170077273

Start: 681001

End: 681483

Strand: Reverse

Name: 170077273

Synonym: SYNPCC7002_A0650

Alternate gene names: NA

Gene position: 681483-681001 (Counterclockwise)

Preceding gene: 170077274

Following gene: 170077272

Centisome position: 22.66

GC content: 44.31

Gene sequence:

>483_bases
ATGGTGCTATCTATCAAAAGCCGATGCCCAAAGGGGAAACATAGTCGTCTTCAGTTAAAACTCAGCAATCATATCAATGC
TGTTACTGAAACAACTCAACTTGCCTATGCCTTTCCAGAATTGTGCTGTAGCTTTGGCGATCGCTCCATTGTTCCTGATA
TTGCGGTGTTTCAATGGTCACGCATCCCATTGGAAGCAGATGGCGAAGTCCCAGATAATTTTCTGCTGTGTCCAGATTGG
ACAATTGAAATTCTTTCCCCTGAACAAAGCCCTAACCGAGTCACTGGCAATATTTTGTACTGCTTAGAGCATGGCTGTCA
GTTGGGGTGGCTTATTGATCCAGGCGATCGATCAATTCTAATTTTTCAGCCTAATCAACAACCACAACTGCTCACGCAAG
AAGATGCACTCAAGATTCTACCGAATATTCCCTTAACCTTGACCGCCGCTGAGGTGTTTAGTTGGCTAAAAATGGGGTCA
TGA

Upstream 100 bases:

>100_bases
ACCGACTGTCTGAGAAATGGAAGTCAAATAATTCATAATTTAATCATCCAAGAACAAATAGAAACAATACCAAATCGTCT
CGATGATTTAATTAAAGTCA

Downstream 100 bases:

>100_bases
TTATTTTCTGATGTTTGATTTGAAGATAAAATAGTTTTCCATAAAAATTTTCAACCTTCATCAAAAGTGAGTGCTAAGTT
ATTAAAGCCTGGTCTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWSRIPLEADGEVPDNFLLCPDW
TIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSILIFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS

Sequences:

>Translated_160_residues
MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWSRIPLEADGEVPDNFLLCPDW
TIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSILIFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS
>Mature_160_residues
MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWSRIPLEADGEVPDNFLLCPDW
TIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSILIFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17930; Mature: 17930

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWS
CEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
RIPLEADGEVPDNFLLCPDWTIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSIL
CCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEECCEEEEECCCCEEEEEECCCCCEEE
IFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS
EECCCCCCCEECCCCHHHHCCCCCEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MVLSIKSRCPKGKHSRLQLKLSNHINAVTETTQLAYAFPELCCSFGDRSIVPDIAVFQWS
CEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
RIPLEADGEVPDNFLLCPDWTIEILSPEQSPNRVTGNILYCLEHGCQLGWLIDPGDRSIL
CCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEECCEEEEECCCCEEEEEECCCCCEEE
IFQPNQQPQLLTQEDALKILPNIPLTLTAAEVFSWLKMGS
EECCCCCCCEECCCCHHHHCCCCCEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA