| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is arsR [H]
Identifier: 170077215
GI number: 170077215
Start: 619815
End: 620132
Strand: Reverse
Name: arsR [H]
Synonym: SYNPCC7002_A0590
Alternate gene names: 170077215
Gene position: 620132-619815 (Counterclockwise)
Preceding gene: 170077216
Following gene: 170077214
Centisome position: 20.62
GC content: 45.6
Gene sequence:
>318_bases ATGTCCCTCACCCAAGACCTATCCCTAATTTTGCAGGGCTTCAAAGCCTTAGGAGATCCCATTCGTTTGGAGATTCTGGA ACGGTTGCGCGCCCAAGAATTATGTGTGTGTGAATTGTGTGATGTCTTGGATTTAAAGCAGTCCAAACTTTCTTTTCACT TGAAAATCCTTAAAGAGAGTGAGTTGGTACTGACCCGACAAGAAGGCCGCTGGATTTACTATCGGCTGAATTTGGCCCAA TTTATCGCCCTAGAATCTTATTTGGCGGAATATCGCCGCTTTGGAGAAATCTTACCTGCTCGCCCCTGTGCAGACTAA
Upstream 100 bases:
>100_bases CGATATGTTGTCCAAGGCGATCGCCCCCTGGAAACTGGACAAACAGTCCGCTTAAGTTTGCTGTCCGAATAACCATAAAG CATCAATTATTTTTGATTTA
Downstream 100 bases:
>100_bases AACCCCAACCCAGAATATAAATCAATTTTTTTTGATATATTGAGTCCTGTAAGCCTCAGCAGGATTTTTTTAGTCATGGT TAAAACCAAGGCGGTGCAGG
Product: transcription regulator ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSLTQDLSLILQGFKALGDPIRLEILERLRAQELCVCELCDVLDLKQSKLSFHLKILKESELVLTRQEGRWIYYRLNLAQ FIALESYLAEYRRFGEILPARPCAD
Sequences:
>Translated_105_residues MSLTQDLSLILQGFKALGDPIRLEILERLRAQELCVCELCDVLDLKQSKLSFHLKILKESELVLTRQEGRWIYYRLNLAQ FIALESYLAEYRRFGEILPARPCAD >Mature_104_residues SLTQDLSLILQGFKALGDPIRLEILERLRAQELCVCELCDVLDLKQSKLSFHLKILKESELVLTRQEGRWIYYRLNLAQF IALESYLAEYRRFGEILPARPCAD
Specific function: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenat
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=70, Percent_Identity=50, Blast_Score=65, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR018334 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 12244; Mature: 12112
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTQDLSLILQGFKALGDPIRLEILERLRAQELCVCELCDVLDLKQSKLSFHLKILKES CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELVLTRQEGRWIYYRLNLAQFIALESYLAEYRRFGEILPARPCAD CEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLTQDLSLILQGFKALGDPIRLEILERLRAQELCVCELCDVLDLKQSKLSFHLKILKES CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELVLTRQEGRWIYYRLNLAQFIALESYLAEYRRFGEILPARPCAD CEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2408017; 1838573; 8416957 [H]