| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077211
Identifier: 170077211
GI number: 170077211
Start: 614362
End: 614805
Strand: Reverse
Name: 170077211
Synonym: SYNPCC7002_A0586
Alternate gene names: NA
Gene position: 614805-614362 (Counterclockwise)
Preceding gene: 170077212
Following gene: 170077210
Centisome position: 20.44
GC content: 48.65
Gene sequence:
>444_bases ATGGGCGATCGCCTCCTGTTTCACCTTGCAATTCCGATTACTGACCCAGTTGTCGCCAAAAAATTCTATGCCGATGCCCT CGGTTGCACGGTGGGACGAGAAAATAGCGGGGCGGTGATTTTTAACTTCTTTGGTCATCAACTGGTGGCCCATGTCACCA AGGAACCCCTCCGCCCCCAAAAGAGCGTTTATCCGCGCCATTTTGGTCTAAATTTTCTCGATGAACAGGATTGGCAACAG GTCTTAAATCGGGCAGAAAACTATCAACTCCCCTTCCGCGATCGCCCCCGCCTCCGGTTTCCAGGAAAATTAACGGAACA TCGTACTTTTTTCCTCGAAGATCCGTTTTTTAATCTATTGGAATTTAAATGGTATCGCCATCCAGAGGCAATTTTTGGCG GTCGAGAAATCACCGAAATTGGCGATCGCTCCGAAACTCACTAG
Upstream 100 bases:
>100_bases AGAAGAGCTGCCGACTAAAGTCCTACGTTAGGGCCGAAAAAGTGCTGAGAAAAATCCCTCTACAATGGGGAAATGATCTT CGTTATGAGAAAAAATTGCC
Downstream 100 bases:
>100_bases GTTTTGCTTTGAGATTATGCGGCTTCAGTAAGTTGCATTACTGTTATTGATGCCGTTGGTCGTCAAAAAAATAAAGGGGC AAAAATCGCCCAATTTGAGC
Product: extradiol family dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Dioxygenase; Dioxygenase/Glyoxalase; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Extradiol Dioxygenase Family Protein; Glyoxalase; Ring-Cleaving Dioxygenase; Extradiol Family Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MGDRLLFHLAIPITDPVVAKKFYADALGCTVGRENSGAVIFNFFGHQLVAHVTKEPLRPQKSVYPRHFGLNFLDEQDWQQ VLNRAENYQLPFRDRPRLRFPGKLTEHRTFFLEDPFFNLLEFKWYRHPEAIFGGREITEIGDRSETH
Sequences:
>Translated_147_residues MGDRLLFHLAIPITDPVVAKKFYADALGCTVGRENSGAVIFNFFGHQLVAHVTKEPLRPQKSVYPRHFGLNFLDEQDWQQ VLNRAENYQLPFRDRPRLRFPGKLTEHRTFFLEDPFFNLLEFKWYRHPEAIFGGREITEIGDRSETH >Mature_146_residues GDRLLFHLAIPITDPVVAKKFYADALGCTVGRENSGAVIFNFFGHQLVAHVTKEPLRPQKSVYPRHFGLNFLDEQDWQQV LNRAENYQLPFRDRPRLRFPGKLTEHRTFFLEDPFFNLLEFKWYRHPEAIFGGREITEIGDRSETH
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17288; Mature: 17157
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRLLFHLAIPITDPVVAKKFYADALGCTVGRENSGAVIFNFFGHQLVAHVTKEPLRPQ CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCC KSVYPRHFGLNFLDEQDWQQVLNRAENYQLPFRDRPRLRFPGKLTEHRTFFLEDPFFNLL HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEECCCHHHHH EFKWYRHPEAIFGGREITEIGDRSETH HHHHCCCCHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure GDRLLFHLAIPITDPVVAKKFYADALGCTVGRENSGAVIFNFFGHQLVAHVTKEPLRPQ CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCC KSVYPRHFGLNFLDEQDWQQVLNRAENYQLPFRDRPRLRFPGKLTEHRTFFLEDPFFNLL HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEECCCHHHHH EFKWYRHPEAIFGGREITEIGDRSETH HHHHCCCCHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA