| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077192
Identifier: 170077192
GI number: 170077192
Start: 594623
End: 594973
Strand: Direct
Name: 170077192
Synonym: SYNPCC7002_A0567
Alternate gene names: NA
Gene position: 594623-594973 (Clockwise)
Preceding gene: 170077191
Following gene: 170077193
Centisome position: 19.77
GC content: 49.57
Gene sequence:
>351_bases ATGCCTCTGATTAAAGTTCAAACATCTTTACCACCCGCTTCCCAGGGGGATGTAGAAGCCCTTTTGCTCAATTTGTCCCG CAAACTCGCGGCGCACCTCGGTAAGCCAGAATCCTATGTGATGACCGCTTTTGAGGCCGGGATTCCCATGACCTTTGGGG GATCGATTGATCCAGCTTGCTATGTGGAGATCAAAAGTGTGGGCACCATGGGCGATCACACCCGCACCATGAGTGAAGAT TTCTGTAATGAAATTCACCAGAGTCTTGGTGTTGCCAAAAACCGTATCTACATTGAGTTTGCCGATGCCAAAGGCAGTAT GTGGGGCTGGAATGGTTCGACTTTCGGTTAA
Upstream 100 bases:
>100_bases ACCTGGCGAGTACGGGCTGGAGTTACGGCGGCTAAAAGTAAGGCTCTATTTTGCCGAAAACCGACCTAGTCTTTCAACAA AATTTTCCTGATTTAAAACG
Downstream 100 bases:
>100_bases CCGCAGCCGATGACCAAAGCGATTCAATTAAGTTTGGGTTTATCTTGACAAACGCCAACTAATCCCAAGGAGCTGCCGCA TCTATAAATTTGGGGCGGCT
Product: ATLS1-like light-inducible protein
Products: NA
Alternate protein names: Macrophage Migration Inhibitory Factor; ATLS1-Like Light-Inducible Protein; Phenylpyruvate Tautomerase; Macrophage Migration Inhibitory Factor Superfamily; Phenylpyruvate Tautomerase Family Protein; MIF/Phenylpyruvate Tautomerase Family Protein; Macrophage Migration Inhibitory Factor Family; Glycosyl Transferase
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPLIKVQTSLPPASQGDVEALLLNLSRKLAAHLGKPESYVMTAFEAGIPMTFGGSIDPACYVEIKSVGTMGDHTRTMSED FCNEIHQSLGVAKNRIYIEFADAKGSMWGWNGSTFG
Sequences:
>Translated_116_residues MPLIKVQTSLPPASQGDVEALLLNLSRKLAAHLGKPESYVMTAFEAGIPMTFGGSIDPACYVEIKSVGTMGDHTRTMSED FCNEIHQSLGVAKNRIYIEFADAKGSMWGWNGSTFG >Mature_115_residues PLIKVQTSLPPASQGDVEALLLNLSRKLAAHLGKPESYVMTAFEAGIPMTFGGSIDPACYVEIKSVGTMGDHTRTMSEDF CNEIHQSLGVAKNRIYIEFADAKGSMWGWNGSTFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505185, Length=117, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12540; Mature: 12409
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIKVQTSLPPASQGDVEALLLNLSRKLAAHLGKPESYVMTAFEAGIPMTFGGSIDPAC CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEHHHCCCCEEECCCCCCEE YVEIKSVGTMGDHTRTMSEDFCNEIHQSLGVAKNRIYIEFADAKGSMWGWNGSTFG EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PLIKVQTSLPPASQGDVEALLLNLSRKLAAHLGKPESYVMTAFEAGIPMTFGGSIDPAC CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEHHHCCCCEEECCCCCCEE YVEIKSVGTMGDHTRTMSEDFCNEIHQSLGVAKNRIYIEFADAKGSMWGWNGSTFG EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA