| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is dfa3 [H]
Identifier: 170077191
GI number: 170077191
Start: 594075
End: 594557
Strand: Direct
Name: dfa3 [H]
Synonym: SYNPCC7002_A0566
Alternate gene names: 170077191
Gene position: 594075-594557 (Clockwise)
Preceding gene: 170077187
Following gene: 170077192
Centisome position: 19.75
GC content: 50.52
Gene sequence:
>483_bases ATGCTAGACGAACAGGCCAAAAAAACAATGCTCCTCCACATTCCCCACGCATTATATATCTGCGGTGTGCGGGATGGTGA TGAGATGAATGGCTTTACTGCCAGTTGGGTGATGCAAGGTTCCTTTAAGCCCCCCCTCGTGGTCAATTGTGTCCGCTCCG ATTCTGGTTCTCACGCCATGCTCAAAAAAACCGGCGTCTTTTCCCTGAGTTTTCTTGACGACTCCCAAAAAGATATGGCC GCCAATTTCTTCAAACCCAAACGTCGGGTCGGCAATAAATTTGAAGATGTGGAATTTTACGAAGGAGCTGAAACTGGCTG TCCAGTGATTAAAGATTCCCTTGGTTATGTGGAATGTAAAGTGGTCGGGGCCGTTGAACAGGGCGATCACACGGTCTTTG TGGGCGAAGTGATCGGCGCTGGCGTACACCGGGAAGGCAAAATTCTCGACCTGGCGAGTACGGGCTGGAGTTACGGCGGC TAA
Upstream 100 bases:
>100_bases GGACGACACGCGCAGCAGGATCAGGATGAGGTTGCAGCATGATCAGCAAAGATGATTAACAATGGTTGTGACAACAAACC CCTACAGGAGAAGTTAAAAA
Downstream 100 bases:
>100_bases AAGTAAGGCTCTATTTTGCCGAAAACCGACCTAGTCTTTCAACAAAATTTTCCTGATTTAAAACGATGCCTCTGATTAAA GTTCAAACATCTTTACCACC
Product: flavin reductase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLDEQAKKTMLLHIPHALYICGVRDGDEMNGFTASWVMQGSFKPPLVVNCVRSDSGSHAMLKKTGVFSLSFLDDSQKDMA ANFFKPKRRVGNKFEDVEFYEGAETGCPVIKDSLGYVECKVVGAVEQGDHTVFVGEVIGAGVHREGKILDLASTGWSYGG
Sequences:
>Translated_160_residues MLDEQAKKTMLLHIPHALYICGVRDGDEMNGFTASWVMQGSFKPPLVVNCVRSDSGSHAMLKKTGVFSLSFLDDSQKDMA ANFFKPKRRVGNKFEDVEFYEGAETGCPVIKDSLGYVECKVVGAVEQGDHTVFVGEVIGAGVHREGKILDLASTGWSYGG >Mature_160_residues MLDEQAKKTMLLHIPHALYICGVRDGDEMNGFTASWVMQGSFKPPLVVNCVRSDSGSHAMLKKTGVFSLSFLDDSQKDMA ANFFKPKRRVGNKFEDVEFYEGAETGCPVIKDSLGYVECKVVGAVEQGDHTVFVGEVIGAGVHREGKILDLASTGWSYGG
Specific function: Mediates electron transfer from NADH to oxygen, reducing it to water. This modular protein has 3 redox cofactors, in other organisms the same activity requires 2 or 3 proteins [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR002563 - InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct; PF00258 Flavodoxin_1; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 17439; Mature: 17439
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDEQAKKTMLLHIPHALYICGVRDGDEMNGFTASWVMQGSFKPPLVVNCVRSDSGSHAM CCCCHHHCEEEEEECCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEE LKKTGVFSLSFLDDSQKDMAANFFKPKRRVGNKFEDVEFYEGAETGCPVIKDSLGYVECK EEECCEEEEEECCCCCHHHHHHHCCCHHHHCCCCCCCEEECCCCCCCCEEECCCCEEEEE VVGAVEQGDHTVFVGEVIGAGVHREGKILDLASTGWSYGG EEEEEECCCEEEEEEHHHCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MLDEQAKKTMLLHIPHALYICGVRDGDEMNGFTASWVMQGSFKPPLVVNCVRSDSGSHAM CCCCHHHCEEEEEECCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEE LKKTGVFSLSFLDDSQKDMAANFFKPKRRVGNKFEDVEFYEGAETGCPVIKDSLGYVECK EEECCEEEEEECCCCCHHHHHHHCCCHHHHCCCCCCCEEECCCCCCCCEEECCCCEEEEE VVGAVEQGDHTVFVGEVIGAGVHREGKILDLASTGWSYGG EEEEEECCCEEEEEEHHHCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]