| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077186
Identifier: 170077186
GI number: 170077186
Start: 588380
End: 588724
Strand: Direct
Name: 170077186
Synonym: SYNPCC7002_A0561
Alternate gene names: NA
Gene position: 588380-588724 (Clockwise)
Preceding gene: 170077185
Following gene: 170077187
Centisome position: 19.56
GC content: 50.43
Gene sequence:
>345_bases TTGCCAACTTCTCCCCCTAAAACCATGCGACGCATTGATATCTTGGCCATCAGTTTCGGTATTTTCATCGTGGGTGGGCT ACTCTATGGTGGCCTCAAAGTTGCGGGCCTCGAAAGTTTAGATGCAGGGATCTGGTCCCAGGCGTTGCTGGTAATTGTGG TGTTTGTCTGGGTGGGAACCTATCTGTTTCGAGTAGGAACCCGCAATATGACCTTTCATCAACAGCGGCGAGATTACGAA GAAGCAGCCCTGCAGCGGCGCTTAGATGAGATGAGCCCCGAAGAATTAGCCCAACTCCAGGCAGAACTTGAGGCAACGGA AGATCAAACTTCGCCAAAAAAGTAA
Upstream 100 bases:
>100_bases TTTCTTTTTGTTCCCTGGGATGCTCCTCCTAAGCCCTTTCCTGAATTTCCGTCCCCGCCGTCGCGAAGTCTAAGGCTTTG CCGAATGAATTTTCCCATCC
Downstream 100 bases:
>100_bases CGGCAATCTTTACCGAAGGGGGAGTTGGGGACGTACAATAACCCCTTGTGTGTTTTTATCGAACAAAATCATGACCTCTG TTTCTGAACGTTTCCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPTSPPKTMRRIDILAISFGIFIVGGLLYGGLKVAGLESLDAGIWSQALLVIVVFVWVGTYLFRVGTRNMTFHQQRRDYE EAALQRRLDEMSPEELAQLQAELEATEDQTSPKK
Sequences:
>Translated_114_residues MPTSPPKTMRRIDILAISFGIFIVGGLLYGGLKVAGLESLDAGIWSQALLVIVVFVWVGTYLFRVGTRNMTFHQQRRDYE EAALQRRLDEMSPEELAQLQAELEATEDQTSPKK >Mature_113_residues PTSPPKTMRRIDILAISFGIFIVGGLLYGGLKVAGLESLDAGIWSQALLVIVVFVWVGTYLFRVGTRNMTFHQQRRDYEE AALQRRLDEMSPEELAQLQAELEATEDQTSPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12827; Mature: 12696
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSPPKTMRRIDILAISFGIFIVGGLLYGGLKVAGLESLDAGIWSQALLVIVVFVWVGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YLFRVGTRNMTFHQQRRDYEEAALQRRLDEMSPEELAQLQAELEATEDQTSPKK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PTSPPKTMRRIDILAISFGIFIVGGLLYGGLKVAGLESLDAGIWSQALLVIVVFVWVGT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YLFRVGTRNMTFHQQRRDYEEAALQRRLDEMSPEELAQLQAELEATEDQTSPKK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA