| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077141
Identifier: 170077141
GI number: 170077141
Start: 545924
End: 546847
Strand: Direct
Name: 170077141
Synonym: SYNPCC7002_A0516
Alternate gene names: NA
Gene position: 545924-546847 (Clockwise)
Preceding gene: 170077140
Following gene: 170077142
Centisome position: 18.15
GC content: 51.3
Gene sequence:
>924_bases ATGTTGGCACAAATTTTGGCGATCGCCGTTGCCCTGGGGAGCGGATTGCTATTTCTGACTGCCTTTATTTTCCCGAAACT CCACCGCCAAGATGACTTTTTTTGGAGCACTGTTGGTCTTTTCTATGCTCTCGTCCTTTGGGTTTGTGCCGGGCAAATGG CTGGGGCCATCCTGTTGGGGCAATTGGCCAGTGTAATCCTCCTCGGTTGGTTTGCTTGGGAAACCCTCCGACTCCGCCAG GCGATCGCCGACCCCAGCAAAATCCCCAACCTCGACAAAGTTTCCCTGGTTGGCTACGTCAAAGATCGCTTTAAAAAACC CAAAGTCGCGCCTGCCCCAGTTACCAAAAAAACACAAAAATCTTCCTCTGATTCCTCTAAAGCCCCTGACCCCGCAAAGG AAGCTCCAGAAACCTCTACACCATCTGAGTCTCCTGAAACGGCCCCAGTTACATCTCCCGAAGCTGAAAAGCCGACCCCA GAACCAGCAACGCCCTCTGCTTCAAAAGATTTAGACAAAGCTGACTCGACAAAGCCCGTTCCCTCGCCAGAAGAAGCTTC TGAGACACCCACGGAAGTATCCGACACCCCAGAAACAGAAAGCGACGCCATCACCGATCCACCGATTACGGCACAACCCT CTAAAAAAGGATTTTCCTTCGGTCGGCTATTTGGACGTAAAACCGCATCTACCGCAGCCCCAACGGAACCCACTGCGACA GAAAAAGACGAAGATATTGAGCAAATTTTTGCCGAAGAAAAAGATGCGTCTGAGCCAGACCCTGCTGTTAATGATGTCAC CGATGACACTTCCCCTCTAGAGGAACCCCAAGCTGAAGCTGCCGAAGCAGCAACCCAGGCAGAAACAGAAGCCTCGACTG AATTAGACGAAACCTCCAAAACCGAAGATACTCCCAAAGATTAG
Upstream 100 bases:
>100_bases GGGTGCGAGATATTCGTTCCCTAGAATAGTTTTTTACGCGAAGATCCGATGATTCTGGCACAATAGGGCAAGCAGTTAGC ATCAGTAGGAGTTGTTGGTC
Downstream 100 bases:
>100_bases GGATCGCCCCAAGAATTCGCTATGATCTTTGACTGAAGCGTATCGTTGATCTCCCGTGCCCTATGGATACCAAAGCCTTT AAACGTTCCCTAAATCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MLAQILAIAVALGSGLLFLTAFIFPKLHRQDDFFWSTVGLFYALVLWVCAGQMAGAILLGQLASVILLGWFAWETLRLRQ AIADPSKIPNLDKVSLVGYVKDRFKKPKVAPAPVTKKTQKSSSDSSKAPDPAKEAPETSTPSESPETAPVTSPEAEKPTP EPATPSASKDLDKADSTKPVPSPEEASETPTEVSDTPETESDAITDPPITAQPSKKGFSFGRLFGRKTASTAAPTEPTAT EKDEDIEQIFAEEKDASEPDPAVNDVTDDTSPLEEPQAEAAEAATQAETEASTELDETSKTEDTPKD
Sequences:
>Translated_307_residues MLAQILAIAVALGSGLLFLTAFIFPKLHRQDDFFWSTVGLFYALVLWVCAGQMAGAILLGQLASVILLGWFAWETLRLRQ AIADPSKIPNLDKVSLVGYVKDRFKKPKVAPAPVTKKTQKSSSDSSKAPDPAKEAPETSTPSESPETAPVTSPEAEKPTP EPATPSASKDLDKADSTKPVPSPEEASETPTEVSDTPETESDAITDPPITAQPSKKGFSFGRLFGRKTASTAAPTEPTAT EKDEDIEQIFAEEKDASEPDPAVNDVTDDTSPLEEPQAEAAEAATQAETEASTELDETSKTEDTPKD >Mature_307_residues MLAQILAIAVALGSGLLFLTAFIFPKLHRQDDFFWSTVGLFYALVLWVCAGQMAGAILLGQLASVILLGWFAWETLRLRQ AIADPSKIPNLDKVSLVGYVKDRFKKPKVAPAPVTKKTQKSSSDSSKAPDPAKEAPETSTPSESPETAPVTSPEAEKPTP EPATPSASKDLDKADSTKPVPSPEEASETPTEVSDTPETESDAITDPPITAQPSKKGFSFGRLFGRKTASTAAPTEPTAT EKDEDIEQIFAEEKDASEPDPAVNDVTDDTSPLEEPQAEAAEAATQAETEASTELDETSKTEDTPKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32758; Mature: 32758
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQILAIAVALGSGLLFLTAFIFPKLHRQDDFFWSTVGLFYALVLWVCAGQMAGAILLG CHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLASVILLGWFAWETLRLRQAIADPSKIPNLDKVSLVGYVKDRFKKPKVAPAPVTKKTQK HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHC SSSDSSKAPDPAKEAPETSTPSESPETAPVTSPEAEKPTPEPATPSASKDLDKADSTKPV CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC PSPEEASETPTEVSDTPETESDAITDPPITAQPSKKGFSFGRLFGRKTASTAAPTEPTAT CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC EKDEDIEQIFAEEKDASEPDPAVNDVTDDTSPLEEPQAEAAEAATQAETEASTELDETSK CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TEDTPKD CCCCCCC >Mature Secondary Structure MLAQILAIAVALGSGLLFLTAFIFPKLHRQDDFFWSTVGLFYALVLWVCAGQMAGAILLG CHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLASVILLGWFAWETLRLRQAIADPSKIPNLDKVSLVGYVKDRFKKPKVAPAPVTKKTQK HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHC SSSDSSKAPDPAKEAPETSTPSESPETAPVTSPEAEKPTPEPATPSASKDLDKADSTKPV CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC PSPEEASETPTEVSDTPETESDAITDPPITAQPSKKGFSFGRLFGRKTASTAAPTEPTAT CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC EKDEDIEQIFAEEKDASEPDPAVNDVTDDTSPLEEPQAEAAEAATQAETEASTELDETSK CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TEDTPKD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA