| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077128
Identifier: 170077128
GI number: 170077128
Start: 531801
End: 532607
Strand: Direct
Name: 170077128
Synonym: SYNPCC7002_A0503
Alternate gene names: NA
Gene position: 531801-532607 (Clockwise)
Preceding gene: 170077127
Following gene: 170077129
Centisome position: 17.68
GC content: 51.8
Gene sequence:
>807_bases ATGACATACGCAGAAGAGTTCCGGCAAACGATGACGGAAATGACCATGGTTGGTCAGGAACAGGGCTTTTTTGAAGCCTT TGGGATTCAGTTCACTTCAAAAGTTTTAGGGACGATGTTGGCGATCGCCGGTATTGGGGCCAGCGCCGGACTGTGGTGGT TTCTCGTTCGGCCCATCCAAGGGGAAATCAGCACCCTCGAACAGGAACTCCAGACAAAACAAGCAGAGTTACAAGAAAAA GGCGCCGGGAATATCCAAGAGCAAATCGCCCAGCGCGAGGCGGAATTGGCCAACGAGCAACGGATTGCCACCGAAATTCT CAATGCCTATGGTCAAGACAAGCAAATGCAGACTTTTTTGCTCGATTTCAACCGGATCCTCACAGCCAGCAATGTACAAC TAACGAGCTACGAGCCTACACCGCCTAAACCCGAATTTATTACCGATGCCGCTACTTACGGTGAAGCTGCCCAAAATAAG CTGAAATACCAAACCTTTAACGTCAGCTTCGATAATATGACCTACACAGAAGCAGAGTCCATGCTCACGAGCATCGATGT GTTGCAGCCGTTGTTGGTATTGCGTAATTTTTCGACGACGGTGGCCGAACCAGCGACATTCCGCTACGAAAATGGCCGTT TGGTAACACAAACCCAAGCCCAGCTAGGGGTTTCCTTTGTGGTGGATGCCCTCATTGCCCCGACCCCGGAAGAGCTAGCC GCCCGACAAGCAGAATTAGCTGCAGAGGCCGCCCCAGCCGAGGGAGAAGAAGGTCAAGAGGAACAACCCGCAGAGAATGG TGGCTAG
Upstream 100 bases:
>100_bases ACAGCCAGGGGGCACGGGGGATGGCCGAACGCTTGCGGAGTAGCTTTTAGGATTTAACGATCTCGATATTCATCAACACT GTGAGGAGGAGCAACAACCG
Downstream 100 bases:
>100_bases GTTTCGAGGTCAAAACAATTTGCTGAGGAGATAGGGAGGTAAACTAGCGGCATAGAAACCATTAATTTTGGTTTCAAAAC AAATTTCTGAAGACATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: Type II And III Secretion System Protein; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQGEISTLEQELQTKQAELQEK GAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFLLDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNK LKYQTFNVSFDNMTYTEAESMLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA ARQAELAAEAAPAEGEEGQEEQPAENGG
Sequences:
>Translated_268_residues MTYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQGEISTLEQELQTKQAELQEK GAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFLLDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNK LKYQTFNVSFDNMTYTEAESMLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA ARQAELAAEAAPAEGEEGQEEQPAENGG >Mature_267_residues TYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQGEISTLEQELQTKQAELQEKG AGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFLLDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNKL KYQTFNVSFDNMTYTEAESMLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELAA RQAELAAEAAPAEGEEGQEEQPAENGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29570; Mature: 29439
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQ CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GEISTLEQELQTKQAELQEKGAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNKLKYQTFNVSFDNMTYTEAES HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH MLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA HHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCHHHHH ARQAELAAEAAPAEGEEGQEEQPAENGG HHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQ CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GEISTLEQELQTKQAELQEKGAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNKLKYQTFNVSFDNMTYTEAES HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH MLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA HHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCHHHHH ARQAELAAEAAPAEGEEGQEEQPAENGG HHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA