Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077128

Identifier: 170077128

GI number: 170077128

Start: 531801

End: 532607

Strand: Direct

Name: 170077128

Synonym: SYNPCC7002_A0503

Alternate gene names: NA

Gene position: 531801-532607 (Clockwise)

Preceding gene: 170077127

Following gene: 170077129

Centisome position: 17.68

GC content: 51.8

Gene sequence:

>807_bases
ATGACATACGCAGAAGAGTTCCGGCAAACGATGACGGAAATGACCATGGTTGGTCAGGAACAGGGCTTTTTTGAAGCCTT
TGGGATTCAGTTCACTTCAAAAGTTTTAGGGACGATGTTGGCGATCGCCGGTATTGGGGCCAGCGCCGGACTGTGGTGGT
TTCTCGTTCGGCCCATCCAAGGGGAAATCAGCACCCTCGAACAGGAACTCCAGACAAAACAAGCAGAGTTACAAGAAAAA
GGCGCCGGGAATATCCAAGAGCAAATCGCCCAGCGCGAGGCGGAATTGGCCAACGAGCAACGGATTGCCACCGAAATTCT
CAATGCCTATGGTCAAGACAAGCAAATGCAGACTTTTTTGCTCGATTTCAACCGGATCCTCACAGCCAGCAATGTACAAC
TAACGAGCTACGAGCCTACACCGCCTAAACCCGAATTTATTACCGATGCCGCTACTTACGGTGAAGCTGCCCAAAATAAG
CTGAAATACCAAACCTTTAACGTCAGCTTCGATAATATGACCTACACAGAAGCAGAGTCCATGCTCACGAGCATCGATGT
GTTGCAGCCGTTGTTGGTATTGCGTAATTTTTCGACGACGGTGGCCGAACCAGCGACATTCCGCTACGAAAATGGCCGTT
TGGTAACACAAACCCAAGCCCAGCTAGGGGTTTCCTTTGTGGTGGATGCCCTCATTGCCCCGACCCCGGAAGAGCTAGCC
GCCCGACAAGCAGAATTAGCTGCAGAGGCCGCCCCAGCCGAGGGAGAAGAAGGTCAAGAGGAACAACCCGCAGAGAATGG
TGGCTAG

Upstream 100 bases:

>100_bases
ACAGCCAGGGGGCACGGGGGATGGCCGAACGCTTGCGGAGTAGCTTTTAGGATTTAACGATCTCGATATTCATCAACACT
GTGAGGAGGAGCAACAACCG

Downstream 100 bases:

>100_bases
GTTTCGAGGTCAAAACAATTTGCTGAGGAGATAGGGAGGTAAACTAGCGGCATAGAAACCATTAATTTTGGTTTCAAAAC
AAATTTCTGAAGACATCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Type II And III Secretion System Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQGEISTLEQELQTKQAELQEK
GAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFLLDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNK
LKYQTFNVSFDNMTYTEAESMLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA
ARQAELAAEAAPAEGEEGQEEQPAENGG

Sequences:

>Translated_268_residues
MTYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQGEISTLEQELQTKQAELQEK
GAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFLLDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNK
LKYQTFNVSFDNMTYTEAESMLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA
ARQAELAAEAAPAEGEEGQEEQPAENGG
>Mature_267_residues
TYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQGEISTLEQELQTKQAELQEKG
AGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFLLDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNKL
KYQTFNVSFDNMTYTEAESMLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELAA
RQAELAAEAAPAEGEEGQEEQPAENGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29570; Mature: 29439

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQ
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GEISTLEQELQTKQAELQEKGAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNKLKYQTFNVSFDNMTYTEAES
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH
MLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA
HHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCHHHHH
ARQAELAAEAAPAEGEEGQEEQPAENGG
HHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYAEEFRQTMTEMTMVGQEQGFFEAFGIQFTSKVLGTMLAIAGIGASAGLWWFLVRPIQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GEISTLEQELQTKQAELQEKGAGNIQEQIAQREAELANEQRIATEILNAYGQDKQMQTFL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LDFNRILTASNVQLTSYEPTPPKPEFITDAATYGEAAQNKLKYQTFNVSFDNMTYTEAES
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH
MLTSIDVLQPLLVLRNFSTTVAEPATFRYENGRLVTQTQAQLGVSFVVDALIAPTPEELA
HHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCHHHHH
ARQAELAAEAAPAEGEEGQEEQPAENGG
HHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA