Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077103

Identifier: 170077103

GI number: 170077103

Start: 507473

End: 508933

Strand: Direct

Name: 170077103

Synonym: SYNPCC7002_A0477

Alternate gene names: NA

Gene position: 507473-508933 (Clockwise)

Preceding gene: 170077102

Following gene: 170077104

Centisome position: 16.87

GC content: 52.91

Gene sequence:

>1461_bases
ATGCGTCTCCTGGTCTCGAAATTATACCGACGCAGTTGGACTTTATTTTTTGTCGGTTTAGTGACGGTACAACTGCTCCC
CAGTCCGGCGATCGCCCTCACCCCCAAAGACTACAGTGAGTTAGAATTTCCTCCCCTACCCGAAATCACCCTTCCCGATT
ACGAACGCTACGAACTAGAAAACGGGATGGTGGTCTATCTCATGGAAGATCACACCCTGCCCTTGGTGGGGGGCTCCATG
GTGATTCGCACTGGTTCACGCCTGGAACCCGCCGACAAAGTGGGCCTCGGCAGTATTACGAGCACTGTGATGCGCAGTGG
GGGCACCCTCAAGCATCCCGCTGACACCTTAAATAACATCCTTGAACAACGGGCCGCCAGCATTGAGACCAGCATCGGGG
AAGCTTCTGGTAGTGCTTCTTTTAGTGCCCTCAAGGAAGATTTTGCACTCGTCTTTGATCTATTTGCCGAAGTGCTCCAG
CAACCCGCCTTTCCCCAGGACAAACTCGACCTCGCGAAACGACAAACCGCCGGAGGTATTGCCCGCCGTAACGATGAACC
CGATGCGATCGCCGCCCGGGAATTTGACAAACTGATCTACGGTGCCGATAGTCCCTACGCCCGCACCGTCGAATATGCCA
CCCTCAATAACATTGACCGGGTCGATTTATTTAACTTCTACCGCAGCTATATCCGCCCTGACCAAATGATCCTCGGCATT
GTCGGTGACATCGACGTAGAAGCCACCAAAGCAAAAATTGCCGCTAAATTTGGCCCCTGGCGTAACCCCAGTCCCAGTCC
TGATCTTGCTCCACCCGCCGTCACCCAACCCGCCCAAAGCGGCGCTTTCCTCGTCGATCAATCCCAACTGACCCAAAGCA
GCATTTTGATTGGCCACCAGGGGGGACAACTGAGTAACCCTGATTATCCAGAACTCTCTGTGATGAATGGTGTGATTAAT
GGCTTTGGGGGTCGGCTTTTTAACGAAATTCGCTCCCGCCAGGGCCTCGCCTATTCTGTATATGGCGTGTGGAGTCCCCG
TTATGACTACGATGGTCAATTTATCGCCGGGGGATCAACCCGTACCGAGGCGACGGTGCCCTTTATCACGGCCATGAAAG
GGGAAATTAAGCGACTGCAAACGGAACTGATTACCCCCGCAGAACTCGCCTATGCCAAGGATTCGATTCTGAATTCCTTT
GTCTTTAATTTTGAAGATCCAGGTCAAACCCTATCCCGCCTCATGCGCTACGAGTACTACGGCTACCCGGAAGATTTTAT
TTTCCAGTACCAACGGGAAGTGGAAGCAACCACCATTGAAGATGTGCAACGGGTGGCCCAAACCTACCTCAAACCGGAAC
AACTAACGGTGTTGGTGGTGGGTAATGCTGCCGCCATGGATCCTCCCCTAAGCAGTCTGTTTGAGACGATTAAACCTGTT
GACATCACCATCCCTGAGTAG

Upstream 100 bases:

>100_bases
GCCGAGTTGAGTTAGCTGCCCATCCCCAGGACAGCCCTGCTAAAATCCATAGAAGCCCTTCAATCTCACAAAATCGATGA
AAAATCCCCAACTCAAGAAG

Downstream 100 bases:

>100_bases
GTGGCGTTGTGGTGCAACTGGTTGAAGAGCGGTCGATACAATTTCAGGTAGATGGGGGCTTCTACCGGGCCCACAGCCGC
ATTGTGCGAGATTTAGGGGT

Product: M16 family proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELENGMVVYLMEDHTLPLVGGSM
VIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNILEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQ
QPAFPQDKLDLAKRQTAGGIARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI
VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQGGQLSNPDYPELSVMNGVIN
GFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGSTRTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSF
VFNFEDPGQTLSRLMRYEYYGYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV
DITIPE

Sequences:

>Translated_486_residues
MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELENGMVVYLMEDHTLPLVGGSM
VIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNILEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQ
QPAFPQDKLDLAKRQTAGGIARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI
VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQGGQLSNPDYPELSVMNGVIN
GFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGSTRTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSF
VFNFEDPGQTLSRLMRYEYYGYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV
DITIPE
>Mature_486_residues
MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELENGMVVYLMEDHTLPLVGGSM
VIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNILEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQ
QPAFPQDKLDLAKRQTAGGIARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI
VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQGGQLSNPDYPELSVMNGVIN
GFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGSTRTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSF
VFNFEDPGQTLSRLMRYEYYGYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV
DITIPE

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 53834; Mature: 53834

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHEECC
NGMVVYLMEDHTLPLVGGSMVIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNI
CCEEEEEECCCCEEEECCCEEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH
LEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQQPAFPQDKLDLAKRQTAGGI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
ARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI
CCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEEHHHCCCCHHHHHHHHHHHCCCCCEEEEE
VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQ
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCHHEEEEECC
GGQLSNPDYPELSVMNGVINGFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGST
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCC
RTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSFVFNFEDPGQTLSRLMRYEYY
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC
DITIPE
EEECCC
>Mature Secondary Structure
MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHEECC
NGMVVYLMEDHTLPLVGGSMVIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNI
CCEEEEEECCCCEEEECCCEEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH
LEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQQPAFPQDKLDLAKRQTAGGI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
ARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI
CCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEEHHHCCCCHHHHHHHHHHHCCCCCEEEEE
VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQ
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCHHEEEEECC
GGQLSNPDYPELSVMNGVINGFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGST
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCC
RTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSFVFNFEDPGQTLSRLMRYEYY
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC
DITIPE
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]