| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077103
Identifier: 170077103
GI number: 170077103
Start: 507473
End: 508933
Strand: Direct
Name: 170077103
Synonym: SYNPCC7002_A0477
Alternate gene names: NA
Gene position: 507473-508933 (Clockwise)
Preceding gene: 170077102
Following gene: 170077104
Centisome position: 16.87
GC content: 52.91
Gene sequence:
>1461_bases ATGCGTCTCCTGGTCTCGAAATTATACCGACGCAGTTGGACTTTATTTTTTGTCGGTTTAGTGACGGTACAACTGCTCCC CAGTCCGGCGATCGCCCTCACCCCCAAAGACTACAGTGAGTTAGAATTTCCTCCCCTACCCGAAATCACCCTTCCCGATT ACGAACGCTACGAACTAGAAAACGGGATGGTGGTCTATCTCATGGAAGATCACACCCTGCCCTTGGTGGGGGGCTCCATG GTGATTCGCACTGGTTCACGCCTGGAACCCGCCGACAAAGTGGGCCTCGGCAGTATTACGAGCACTGTGATGCGCAGTGG GGGCACCCTCAAGCATCCCGCTGACACCTTAAATAACATCCTTGAACAACGGGCCGCCAGCATTGAGACCAGCATCGGGG AAGCTTCTGGTAGTGCTTCTTTTAGTGCCCTCAAGGAAGATTTTGCACTCGTCTTTGATCTATTTGCCGAAGTGCTCCAG CAACCCGCCTTTCCCCAGGACAAACTCGACCTCGCGAAACGACAAACCGCCGGAGGTATTGCCCGCCGTAACGATGAACC CGATGCGATCGCCGCCCGGGAATTTGACAAACTGATCTACGGTGCCGATAGTCCCTACGCCCGCACCGTCGAATATGCCA CCCTCAATAACATTGACCGGGTCGATTTATTTAACTTCTACCGCAGCTATATCCGCCCTGACCAAATGATCCTCGGCATT GTCGGTGACATCGACGTAGAAGCCACCAAAGCAAAAATTGCCGCTAAATTTGGCCCCTGGCGTAACCCCAGTCCCAGTCC TGATCTTGCTCCACCCGCCGTCACCCAACCCGCCCAAAGCGGCGCTTTCCTCGTCGATCAATCCCAACTGACCCAAAGCA GCATTTTGATTGGCCACCAGGGGGGACAACTGAGTAACCCTGATTATCCAGAACTCTCTGTGATGAATGGTGTGATTAAT GGCTTTGGGGGTCGGCTTTTTAACGAAATTCGCTCCCGCCAGGGCCTCGCCTATTCTGTATATGGCGTGTGGAGTCCCCG TTATGACTACGATGGTCAATTTATCGCCGGGGGATCAACCCGTACCGAGGCGACGGTGCCCTTTATCACGGCCATGAAAG GGGAAATTAAGCGACTGCAAACGGAACTGATTACCCCCGCAGAACTCGCCTATGCCAAGGATTCGATTCTGAATTCCTTT GTCTTTAATTTTGAAGATCCAGGTCAAACCCTATCCCGCCTCATGCGCTACGAGTACTACGGCTACCCGGAAGATTTTAT TTTCCAGTACCAACGGGAAGTGGAAGCAACCACCATTGAAGATGTGCAACGGGTGGCCCAAACCTACCTCAAACCGGAAC AACTAACGGTGTTGGTGGTGGGTAATGCTGCCGCCATGGATCCTCCCCTAAGCAGTCTGTTTGAGACGATTAAACCTGTT GACATCACCATCCCTGAGTAG
Upstream 100 bases:
>100_bases GCCGAGTTGAGTTAGCTGCCCATCCCCAGGACAGCCCTGCTAAAATCCATAGAAGCCCTTCAATCTCACAAAATCGATGA AAAATCCCCAACTCAAGAAG
Downstream 100 bases:
>100_bases GTGGCGTTGTGGTGCAACTGGTTGAAGAGCGGTCGATACAATTTCAGGTAGATGGGGGCTTCTACCGGGCCCACAGCCGC ATTGTGCGAGATTTAGGGGT
Product: M16 family proteinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELENGMVVYLMEDHTLPLVGGSM VIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNILEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQ QPAFPQDKLDLAKRQTAGGIARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQGGQLSNPDYPELSVMNGVIN GFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGSTRTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSF VFNFEDPGQTLSRLMRYEYYGYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV DITIPE
Sequences:
>Translated_486_residues MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELENGMVVYLMEDHTLPLVGGSM VIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNILEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQ QPAFPQDKLDLAKRQTAGGIARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQGGQLSNPDYPELSVMNGVIN GFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGSTRTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSF VFNFEDPGQTLSRLMRYEYYGYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV DITIPE >Mature_486_residues MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELENGMVVYLMEDHTLPLVGGSM VIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNILEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQ QPAFPQDKLDLAKRQTAGGIARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQGGQLSNPDYPELSVMNGVIN GFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGSTRTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSF VFNFEDPGQTLSRLMRYEYYGYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV DITIPE
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 53834; Mature: 53834
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHEECC NGMVVYLMEDHTLPLVGGSMVIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNI CCEEEEEECCCCEEEECCCEEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH LEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQQPAFPQDKLDLAKRQTAGGI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC ARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI CCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEEHHHCCCCHHHHHHHHHHHCCCCCEEEEE VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQ ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCHHEEEEECC GGQLSNPDYPELSVMNGVINGFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCC RTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSFVFNFEDPGQTLSRLMRYEYY CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC DITIPE EEECCC >Mature Secondary Structure MRLLVSKLYRRSWTLFFVGLVTVQLLPSPAIALTPKDYSELEFPPLPEITLPDYERYELE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHEECC NGMVVYLMEDHTLPLVGGSMVIRTGSRLEPADKVGLGSITSTVMRSGGTLKHPADTLNNI CCEEEEEECCCCEEEECCCEEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH LEQRAASIETSIGEASGSASFSALKEDFALVFDLFAEVLQQPAFPQDKLDLAKRQTAGGI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC ARRNDEPDAIAAREFDKLIYGADSPYARTVEYATLNNIDRVDLFNFYRSYIRPDQMILGI CCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEEHHHCCCCHHHHHHHHHHHCCCCCEEEEE VGDIDVEATKAKIAAKFGPWRNPSPSPDLAPPAVTQPAQSGAFLVDQSQLTQSSILIGHQ ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCHHEEEEECC GGQLSNPDYPELSVMNGVINGFGGRLFNEIRSRQGLAYSVYGVWSPRYDYDGQFIAGGST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCC RTEATVPFITAMKGEIKRLQTELITPAELAYAKDSILNSFVFNFEDPGQTLSRLMRYEYY CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GYPEDFIFQYQREVEATTIEDVQRVAQTYLKPEQLTVLVVGNAAAMDPPLSSLFETIKPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC DITIPE EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]