| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is dnaK [H]
Identifier: 170077102
GI number: 170077102
Start: 505783
End: 507387
Strand: Direct
Name: dnaK [H]
Synonym: SYNPCC7002_A0476
Alternate gene names: 170077102
Gene position: 505783-507387 (Clockwise)
Preceding gene: 170077100
Following gene: 170077103
Centisome position: 16.81
GC content: 51.28
Gene sequence:
>1605_bases ATGGCGATCGCAGTGGATTTTGGGACGAGCAATACCCTAGTGACCCGGTGGAATGCCGCCAAAGGAGCCCCAGAAATTCT CCCACTCCAGGGTCTTTCCCAACGCATTTCCCCGAATCCACCGCTGATCCCCAGCCTTTTGTACATCGAAAATGCCGCCG ACCAAAAAGTCGTTATCGGTCAAGCCATTGGCGATCGCGGTTTAGATCGCGGCCCCGATCCCCGCTATTTCTGTAACTTT AAACGGGGCATTGGCACCGCAATCCAAGGTTTTTTACCGGAACTAGACGGCGAAAAAATCACCTTTGAAAAAATGGGGGA ATATTTCCTCAACGGCATTTTTGCCCAACTCAAAGCCCAGGGTGAACCCCTCGATAGCCTCGTTTTAACCGTGCCAGTCG ATAGTTTTGAAGCCTACCGGAGTTGGCTGAGTCGGCTTTGTGAGCAGTTGCCAGAACTCGAAAAAATTCAGCTTTTGGAC GAACCCACCGCCGCCGCCTTGGGCTATGGAGCCTTGGCTGAAGATTTAAAAAGAGTTCTCGTGGTGGATTTTGGGGGGGG AACCGTAGATTTTTCTCTCGTAGATCTCAACCTGGCCCAGGGCCAAAGCAAACCGACGGGCTTTATTTTGAAGTGGGGGC GTAAATCCTTTGCCGAAAGCAAAACCCAAAAAGTCAAAACCGCAAAAGTGCTGGCGAAAGCAGGTAAAAATCTCGGTGGT TCTGATTTAGATAATTGGCTCTTTGAATATTTCCAGACCCAACAAAATTTGCCCCAGGATGCCCTGAGTTTACGCTTAGT TGAACGGTTGAAAATTGCCCTCTCCCAAAAGACGAAGGCAACGGAGATTTATTACAACGACCAAACCTTTGAAACCTATG AGTTGACCCTGGGTCGGTCGGCCTTTGAGGAGATTTTAGAAAATCAAGGCTTCCTCGCCCAACTTGATGATTTGCTGGCC CAGGTCTTGCAACAGGCCCGCCGTAATGGTGTCGGCAAAGAGGATATCGAAGCGGTGCTCCTAGTCGGAGGCACGAGCCA AATTCCCCTAGTGCAAAGCTGGTTAGAGGGCTATTTCCCCCCGGAAAAAATTAAACGAGATAATCCCTTTGGGGCGATCG CCTGGGGGGCGTTGCAGTTGGCCCAGGGATTTGAACTCAAAGATTTTCTTTACCACAGCTACGGTATCCGCTACTGGAAT CGCCGCCATAATCGCCACGATTGGCAACCGATTATTAACCAAGGCCAGCCCTACCCGATGACGGAACCGCTGGAAATCAC CCTAGGGGCATCGATGGATCAACAGCCCAGCATTGAACTAATCGTTGGCGAGTTGGGAGAACAAAGCAGCGGCACGGAGG TTTATTTCGATGGCGATCGCCTCGTGACCCAACAACTAGGAGCCAACCAAACCAACGTTAAACCCCTCAATGACCGGGAA GGGGCGCGCACCATTGCCAAACTGGATCCCGTGGGCTATCCCGGCACTGACCGCATTAAGTTGCAATTCCTCGTCGATGG CGATCGCACCTTGCGGGTTACCGTCGAGGATCTACTGCGCAATGTCACCCTCATTGAAAACCAAAAAGTTGCCGAGTTGA GTTAG
Upstream 100 bases:
>100_bases TGCTTTCGGGAATGATTGGGCCAGGGCGACCGGAAACCGTCGAACTCGATACAATACAAAAATTGTCCAGTTTAGCTTTC AAGAAAATCACGAAATCATT
Downstream 100 bases:
>100_bases CTGCCCATCCCCAGGACAGCCCTGCTAAAATCCATAGAAGCCCTTCAATCTCACAAAATCGATGAAAAATCCCCAACTCA AGAAGATGCGTCTCCTGGTC
Product: DnaK-type molecular chaperone
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MAIAVDFGTSNTLVTRWNAAKGAPEILPLQGLSQRISPNPPLIPSLLYIENAADQKVVIGQAIGDRGLDRGPDPRYFCNF KRGIGTAIQGFLPELDGEKITFEKMGEYFLNGIFAQLKAQGEPLDSLVLTVPVDSFEAYRSWLSRLCEQLPELEKIQLLD EPTAAALGYGALAEDLKRVLVVDFGGGTVDFSLVDLNLAQGQSKPTGFILKWGRKSFAESKTQKVKTAKVLAKAGKNLGG SDLDNWLFEYFQTQQNLPQDALSLRLVERLKIALSQKTKATEIYYNDQTFETYELTLGRSAFEEILENQGFLAQLDDLLA QVLQQARRNGVGKEDIEAVLLVGGTSQIPLVQSWLEGYFPPEKIKRDNPFGAIAWGALQLAQGFELKDFLYHSYGIRYWN RRHNRHDWQPIINQGQPYPMTEPLEITLGASMDQQPSIELIVGELGEQSSGTEVYFDGDRLVTQQLGANQTNVKPLNDRE GARTIAKLDPVGYPGTDRIKLQFLVDGDRTLRVTVEDLLRNVTLIENQKVAELS
Sequences:
>Translated_534_residues MAIAVDFGTSNTLVTRWNAAKGAPEILPLQGLSQRISPNPPLIPSLLYIENAADQKVVIGQAIGDRGLDRGPDPRYFCNF KRGIGTAIQGFLPELDGEKITFEKMGEYFLNGIFAQLKAQGEPLDSLVLTVPVDSFEAYRSWLSRLCEQLPELEKIQLLD EPTAAALGYGALAEDLKRVLVVDFGGGTVDFSLVDLNLAQGQSKPTGFILKWGRKSFAESKTQKVKTAKVLAKAGKNLGG SDLDNWLFEYFQTQQNLPQDALSLRLVERLKIALSQKTKATEIYYNDQTFETYELTLGRSAFEEILENQGFLAQLDDLLA QVLQQARRNGVGKEDIEAVLLVGGTSQIPLVQSWLEGYFPPEKIKRDNPFGAIAWGALQLAQGFELKDFLYHSYGIRYWN RRHNRHDWQPIINQGQPYPMTEPLEITLGASMDQQPSIELIVGELGEQSSGTEVYFDGDRLVTQQLGANQTNVKPLNDRE GARTIAKLDPVGYPGTDRIKLQFLVDGDRTLRVTVEDLLRNVTLIENQKVAELS >Mature_533_residues AIAVDFGTSNTLVTRWNAAKGAPEILPLQGLSQRISPNPPLIPSLLYIENAADQKVVIGQAIGDRGLDRGPDPRYFCNFK RGIGTAIQGFLPELDGEKITFEKMGEYFLNGIFAQLKAQGEPLDSLVLTVPVDSFEAYRSWLSRLCEQLPELEKIQLLDE PTAAALGYGALAEDLKRVLVVDFGGGTVDFSLVDLNLAQGQSKPTGFILKWGRKSFAESKTQKVKTAKVLAKAGKNLGGS DLDNWLFEYFQTQQNLPQDALSLRLVERLKIALSQKTKATEIYYNDQTFETYELTLGRSAFEEILENQGFLAQLDDLLAQ VLQQARRNGVGKEDIEAVLLVGGTSQIPLVQSWLEGYFPPEKIKRDNPFGAIAWGALQLAQGFELKDFLYHSYGIRYWNR RHNRHDWQPIINQGQPYPMTEPLEITLGASMDQQPSIELIVGELGEQSSGTEVYFDGDRLVTQQLGANQTNVKPLNDREG ARTIAKLDPVGYPGTDRIKLQFLVDGDRTLRVTVEDLLRNVTLIENQKVAELS
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Homo sapiens, GI34419635, Length=300, Percent_Identity=28.3333333333333, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI124256496, Length=275, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI24234688, Length=276, Percent_Identity=27.8985507246377, Blast_Score=72, Evalue=9e-13, Organism=Escherichia coli, GI1786196, Length=273, Percent_Identity=31.1355311355311, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1786870, Length=443, Percent_Identity=24.3792325056433, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788875, Length=259, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17534771, Length=317, Percent_Identity=28.391167192429, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17568549, Length=273, Percent_Identity=29.3040293040293, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17534015, Length=438, Percent_Identity=25.3424657534247, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17534013, Length=438, Percent_Identity=25.3424657534247, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17507981, Length=303, Percent_Identity=28.0528052805281, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32564617, Length=265, Percent_Identity=27.5471698113208, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324120, Length=273, Percent_Identity=31.1355311355311, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6319972, Length=273, Percent_Identity=31.1355311355311, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6322505, Length=403, Percent_Identity=25.3101736972705, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322426, Length=263, Percent_Identity=28.8973384030418, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6319314, Length=273, Percent_Identity=29.6703296703297, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6319396, Length=308, Percent_Identity=28.2467532467532, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320805, Length=401, Percent_Identity=25.1870324189526, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320950, Length=326, Percent_Identity=27.3006134969325, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24653595, Length=407, Percent_Identity=23.3415233415233, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 59465; Mature: 59334
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00329 HSP70_2 ; PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAVDFGTSNTLVTRWNAAKGAPEILPLQGLSQRISPNPPLIPSLLYIENAADQKVVIG CEEEEEECCCCCEEEEECCCCCCCCEEECCCHHHHCCCCCCCCCCEEEEECCCCCEEEEE QAIGDRGLDRGPDPRYFCNFKRGIGTAIQGFLPELDGEKITFEKMGEYFLNGIFAQLKAQ EHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCC GEPLDSLVLTVPVDSFEAYRSWLSRLCEQLPELEKIQLLDEPTAAALGYGALAEDLKRVL CCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCEEE VVDFGGGTVDFSLVDLNLAQGQSKPTGFILKWGRKSFAESKTQKVKTAKVLAKAGKNLGG EEEECCCEEEEEEEEEEHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCC SDLDNWLFEYFQTQQNLPQDALSLRLVERLKIALSQKTKATEIYYNDQTFETYELTLGRS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHH AFEEILENQGFLAQLDDLLAQVLQQARRNGVGKEDIEAVLLVGGTSQIPLVQSWLEGYFP HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHHCCCC PEKIKRDNPFGAIAWGALQLAQGFELKDFLYHSYGIRYWNRRHNRHDWQPIINQGQPYPM HHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC TEPLEITLGASMDQQPSIELIVGELGEQSSGTEVYFDGDRLVTQQLGANQTNVKPLNDRE CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCC GARTIAKLDPVGYPGTDRIKLQFLVDGDRTLRVTVEDLLRNVTLIENQKVAELS HHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure AIAVDFGTSNTLVTRWNAAKGAPEILPLQGLSQRISPNPPLIPSLLYIENAADQKVVIG EEEEEECCCCCEEEEECCCCCCCCEEECCCHHHHCCCCCCCCCCEEEEECCCCCEEEEE QAIGDRGLDRGPDPRYFCNFKRGIGTAIQGFLPELDGEKITFEKMGEYFLNGIFAQLKAQ EHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCC GEPLDSLVLTVPVDSFEAYRSWLSRLCEQLPELEKIQLLDEPTAAALGYGALAEDLKRVL CCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCEEE VVDFGGGTVDFSLVDLNLAQGQSKPTGFILKWGRKSFAESKTQKVKTAKVLAKAGKNLGG EEEECCCEEEEEEEEEEHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCC SDLDNWLFEYFQTQQNLPQDALSLRLVERLKIALSQKTKATEIYYNDQTFETYELTLGRS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHH AFEEILENQGFLAQLDDLLAQVLQQARRNGVGKEDIEAVLLVGGTSQIPLVQSWLEGYFP HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHHCCCC PEKIKRDNPFGAIAWGALQLAQGFELKDFLYHSYGIRYWNRRHNRHDWQPIINQGQPYPM HHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC TEPLEITLGASMDQQPSIELIVGELGEQSSGTEVYFDGDRLVTQQLGANQTNVKPLNDRE CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCC GARTIAKLDPVGYPGTDRIKLQFLVDGDRTLRVTVEDLLRNVTLIENQKVAELS HHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA