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The map label for this gene is 170077012

Identifier: 170077012

GI number: 170077012

Start: 408303

End: 408698

Strand: Direct

Name: 170077012

Synonym: SYNPCC7002_A0384

Alternate gene names: NA

Gene position: 408303-408698 (Clockwise)

Preceding gene: 170077011

Following gene: 170077013

Centisome position: 13.57

GC content: 53.03

Gene sequence:

>396_bases
TTGTTTGTCCCTGACATTACCGCTGATCAGCTCCGACAATTATCCCCCGCGTCCTTAGCCTATGTGGGGGATGCTGTTTA
TGAACTCTACAGCCGCTGTTATTTTTTGTTGCCCCCCTGTCGCATCGCGGATTACCACGGTAAGGTGGTGGCGGAGGTGC
GGGCAGAAACCCAAGCCCAATATTTAACTCTCCTGGAACCCCATTTAAGCGAGCTAGAACGGGACATTGTTCGCCGGGGG
CGCAATGCAGCCACCGGAAAACCAAGGCGTCTGAGCTTAGCTATTTATCGGCAGGCTACGGGCTTTGAAGCCCTAGTCGG
ATATCTCTATCTCACAAACCCGCAGCGTTTGGCCGAATTATTTACCTGTTTACCCCAAGAACGGTCTGGGGTCTGA

Upstream 100 bases:

>100_bases
CGGTGAAGTTGGTTCGCCTAGAGAAGTTTTTGTCTCTACGGAACTCCATTGATGAGGCGATCGCCCACCTAGACGAGAAA
AAATAGGGACGAGAAAACCA

Downstream 100 bases:

>100_bases
TATGATCGACTCTCTTTTGTGTTTCGTTGGGGCTTTTTCCCCCAGGGAGCGCTCCGCCTGAGGTAAGACAAAAATATGTT
TGTGTTGATTTAAGGGTTGG

Product: ribonuclease III protein

Products: NA

Alternate protein names: URF4 [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MFVPDITADQLRQLSPASLAYVGDAVYELYSRCYFLLPPCRIADYHGKVVAEVRAETQAQYLTLLEPHLSELERDIVRRG
RNAATGKPRRLSLAIYRQATGFEALVGYLYLTNPQRLAELFTCLPQERSGV

Sequences:

>Translated_131_residues
MFVPDITADQLRQLSPASLAYVGDAVYELYSRCYFLLPPCRIADYHGKVVAEVRAETQAQYLTLLEPHLSELERDIVRRG
RNAATGKPRRLSLAIYRQATGFEALVGYLYLTNPQRLAELFTCLPQERSGV
>Mature_131_residues
MFVPDITADQLRQLSPASLAYVGDAVYELYSRCYFLLPPCRIADYHGKVVAEVRAETQAQYLTLLEPHLSELERDIVRRG
RNAATGKPRRLSLAIYRQATGFEALVGYLYLTNPQRLAELFTCLPQERSGV

Specific function: Unknown

COG id: COG1939

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000999
- InterPro:   IPR008226 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14836; Mature: 14836

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVPDITADQLRQLSPASLAYVGDAVYELYSRCYFLLPPCRIADYHGKVVAEVRAETQAQ
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCEECCCCCHHHHHHHHHHHHH
YLTLLEPHLSELERDIVRRGRNAATGKPRRLSLAIYRQATGFEALVGYLYLTNPQRLAEL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHEEHHHCCCHHHHHHHHHCCCHHHHHHH
FTCLPQERSGV
HHHCCCCCCCC
>Mature Secondary Structure
MFVPDITADQLRQLSPASLAYVGDAVYELYSRCYFLLPPCRIADYHGKVVAEVRAETQAQ
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCEECCCCCHHHHHHHHHHHHH
YLTLLEPHLSELERDIVRRGRNAATGKPRRLSLAIYRQATGFEALVGYLYLTNPQRLAEL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHEEHHHCCCHHHHHHHHHCCCHHHHHHH
FTCLPQERSGV
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8363578 [H]