Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170076975

Identifier: 170076975

GI number: 170076975

Start: 365107

End: 365574

Strand: Direct

Name: 170076975

Synonym: SYNPCC7002_A0347

Alternate gene names: NA

Gene position: 365107-365574 (Clockwise)

Preceding gene: 170076974

Following gene: 170076976

Centisome position: 12.14

GC content: 50.21

Gene sequence:

>468_bases
ATGATTACCAAAACCGTTGCCGAAGTCATGACCCCCGATCCCGCCGTGGTCAAAGCAGATGATTCGCTCCAAACGGCGAT
CGCCCTCCTTGTGGAGAAAAAAATTAGCGCCCTTCCCGTTGTTGATGGTCAGGGTAAATTGGTGGGGATCATTTCAGACA
GTGACCTCACCTGGCAAGAAACAGGGGTAGATACGCCCCCCTACATCATGTTGTTGGATAGTGTGATTTATCTGCAAAAT
CCCGCCAAGCATGACGCTGAGATTCACAAGGCCCTCGGCCAAACGGTGGGGGAAGTCATGAGCAAAAAAGTTTACACGAT
TCACCCCGAAAAAATTGTCCGGGAAGCGGCTCACTTAATGCATGAGAAACACGTGGGTCGTTTGCCCGTCATTGCCCCAG
ACAGCGAAAAAGTCATTGGGATCATTACCCAAGGTGATATTATTCGAGCAATGGCCCAGGCCTCTTAA

Upstream 100 bases:

>100_bases
ATCGGCCTCGAAGTAACGATCTACTACGAGAACCCCACAATAAAGCGAGATTTTCCTAAAATAAAGACAGAAAATCCTAA
AAATCCCCTAAGCTGGCATC

Downstream 100 bases:

>100_bases
ATTCCATTGTTTCATTTGGTAAAACATCTTCATGGCTTCCCTCGAATCCGTCCGACAATTGCTTTCTTCCGATAGCTTTG
GCGATCGCATTTCCGGCTTA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQETGVDTPPYIMLLDSVIYLQN
PAKHDAEIHKALGQTVGEVMSKKVYTIHPEKIVREAAHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQAS

Sequences:

>Translated_155_residues
MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQETGVDTPPYIMLLDSVIYLQN
PAKHDAEIHKALGQTVGEVMSKKVYTIHPEKIVREAAHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQAS
>Mature_155_residues
MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQETGVDTPPYIMLLDSVIYLQN
PAKHDAEIHKALGQTVGEVMSKKVYTIHPEKIVREAAHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQAS

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16765; Mature: 16765

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQE
CCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCC
TGVDTPPYIMLLDSVIYLQNPAKHDAEIHKALGQTVGEVMSKKVYTIHPEKIVREAAHLM
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHH
HEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQAS
HHHCCCCCCEECCCCCCEEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQE
CCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCC
TGVDTPPYIMLLDSVIYLQNPAKHDAEIHKALGQTVGEVMSKKVYTIHPEKIVREAAHLM
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHH
HEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQAS
HHHCCCCCCEECCCCCCEEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]