Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170076974

Identifier: 170076974

GI number: 170076974

Start: 364576

End: 365022

Strand: Direct

Name: 170076974

Synonym: SYNPCC7002_A0346

Alternate gene names: NA

Gene position: 364576-365022 (Clockwise)

Preceding gene: 170076973

Following gene: 170076975

Centisome position: 12.12

GC content: 56.15

Gene sequence:

>447_bases
ATGTTTTCCTCCTTCGACAATCAAGGCCCGCAACCCAGGGAAAAATGGCGATCGCACGTGGATTGGTTCGTCCAAGACTA
CCGCTCCCAACTGACGGCCCTCGCCTGGGGGCTCCAGCAGGAATGGCACCACGACGGCACGATCCTCGGCATTGACCTCA
AACCCCAGCCCCATTTTGTGCCCTGCTCCCCAGAAACCCTCCAGACCCTCAATCGACGGGTGGGGGGTCGTCTCCAGGAA
ATCCTGGGGATCATTGCAGGGGCAGACTTTGAGCAGGATGTAATTATCCTCTGCATTGGTGATGGGCAGGTGAAACTGGT
GTATTACCAAGCTGACCCCAGCCCTGAAACCTGTTGGCAAACCCATGGCCCCGATCTGGATCAGTTGATTGCCGATTTAG
AAGCGGCCATGGCTGAATCTATCCAGCTTGAATCGGCCTCGAAGTAA

Upstream 100 bases:

>100_bases
GTGGGTACGGTGGTCGCAGGTCAAGGGGAAGTCCTCGGGCTACAATAGCTACGGTCATCCTTGCCAACGATTAATAGTTA
CTGATATTGGGTTTGAGTTC

Downstream 100 bases:

>100_bases
CGATCTACTACGAGAACCCCACAATAAAGCGAGATTTTCCTAAAATAAAGACAGAAAATCCTAAAAATCCCCTAAGCTGG
CATCATGATTACCAAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFVPCSPETLQTLNRRVGGRLQE
ILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQTHGPDLDQLIADLEAAMAESIQLESASK

Sequences:

>Translated_148_residues
MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFVPCSPETLQTLNRRVGGRLQE
ILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQTHGPDLDQLIADLEAAMAESIQLESASK
>Mature_148_residues
MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFVPCSPETLQTLNRRVGGRLQE
ILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQTHGPDLDQLIADLEAAMAESIQLESASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16701; Mature: 16701

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEE
PCSPETLQTLNRRVGGRLQEILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQ
CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHC
THGPDLDQLIADLEAAMAESIQLESASK
CCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEE
PCSPETLQTLNRRVGGRLQEILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQ
CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHC
THGPDLDQLIADLEAAMAESIQLESASK
CCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA