| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170076974
Identifier: 170076974
GI number: 170076974
Start: 364576
End: 365022
Strand: Direct
Name: 170076974
Synonym: SYNPCC7002_A0346
Alternate gene names: NA
Gene position: 364576-365022 (Clockwise)
Preceding gene: 170076973
Following gene: 170076975
Centisome position: 12.12
GC content: 56.15
Gene sequence:
>447_bases ATGTTTTCCTCCTTCGACAATCAAGGCCCGCAACCCAGGGAAAAATGGCGATCGCACGTGGATTGGTTCGTCCAAGACTA CCGCTCCCAACTGACGGCCCTCGCCTGGGGGCTCCAGCAGGAATGGCACCACGACGGCACGATCCTCGGCATTGACCTCA AACCCCAGCCCCATTTTGTGCCCTGCTCCCCAGAAACCCTCCAGACCCTCAATCGACGGGTGGGGGGTCGTCTCCAGGAA ATCCTGGGGATCATTGCAGGGGCAGACTTTGAGCAGGATGTAATTATCCTCTGCATTGGTGATGGGCAGGTGAAACTGGT GTATTACCAAGCTGACCCCAGCCCTGAAACCTGTTGGCAAACCCATGGCCCCGATCTGGATCAGTTGATTGCCGATTTAG AAGCGGCCATGGCTGAATCTATCCAGCTTGAATCGGCCTCGAAGTAA
Upstream 100 bases:
>100_bases GTGGGTACGGTGGTCGCAGGTCAAGGGGAAGTCCTCGGGCTACAATAGCTACGGTCATCCTTGCCAACGATTAATAGTTA CTGATATTGGGTTTGAGTTC
Downstream 100 bases:
>100_bases CGATCTACTACGAGAACCCCACAATAAAGCGAGATTTTCCTAAAATAAAGACAGAAAATCCTAAAAATCCCCTAAGCTGG CATCATGATTACCAAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFVPCSPETLQTLNRRVGGRLQE ILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQTHGPDLDQLIADLEAAMAESIQLESASK
Sequences:
>Translated_148_residues MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFVPCSPETLQTLNRRVGGRLQE ILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQTHGPDLDQLIADLEAAMAESIQLESASK >Mature_148_residues MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFVPCSPETLQTLNRRVGGRLQE ILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQTHGPDLDQLIADLEAAMAESIQLESASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16701; Mature: 16701
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEE PCSPETLQTLNRRVGGRLQEILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQ CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHC THGPDLDQLIADLEAAMAESIQLESASK CCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFSSFDNQGPQPREKWRSHVDWFVQDYRSQLTALAWGLQQEWHHDGTILGIDLKPQPHFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEE PCSPETLQTLNRRVGGRLQEILGIIAGADFEQDVIILCIGDGQVKLVYYQADPSPETCWQ CCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHC THGPDLDQLIADLEAAMAESIQLESASK CCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA