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The map label for this gene is omp85 [H]

Identifier: 170076946

GI number: 170076946

Start: 331497

End: 333668

Strand: Direct

Name: omp85 [H]

Synonym: SYNPCC7002_A0318

Alternate gene names: 170076946

Gene position: 331497-333668 (Clockwise)

Preceding gene: 170076945

Following gene: 170076947

Centisome position: 11.02

GC content: 53.41

Gene sequence:

>2172_bases
GTGCAGAAACAACAAAATTTAGACTATTTTTCCCCCCAGGCCCTCGCACTTTGGGCGGCGATCGCCTCTTTGGGTGTGAT
GTCTCCGGCCCATGCCGAACCCCGATCAGAAGGGAGTCACTCCGATCCCCTGGTGCCAACGGCGACCCAAGTTGTTGTGC
CAGCTCTGCCCGTAGAGGATGTAGCCCCCACAGCAGCACCAGCTTCCCAGACGCCAGCGCCCCAGTCCGAAAACCTGGCC
CAATCATCAACCCAAGCTGTTACCTCTCCCGTTGCTCAGGCTCAAGAAGCTCCCCAAGATAGTAATCTGCCGCAACTCTA
CGCCCAGCAGCAGGGAAATCCTAATGCCCAGCAAGCCAACCCCAACGAGCCTAGGGTATTGGTCGCAGAAATTCAGATTA
ATGGTGTGGGCGACAACGTCGAACTGGAACAAAGAATTATCCGGGCCATTGAAACCCAAGCCGGGCGGCCGACGACGGTT
TCACAAATCCGTAATGACGTGAACCGTGTTTATGCGACAGGTTTGTTTGCCAATGTAGTCGCCACCCCGGAAGATACACC
CCTTGGGGTACGGGTGACATTTGACGTGGTGCCCAACCCCGTTTTGACCGATATCGTCGTGCAGGCATTGCCCCTAGAAG
GCAGTCAAAATATTACCCCTCCCGAAGTTGTCGATAATATTTTTAGCGATCGCTATGGCGAAATTATCAACCTCAACGAT
TTCCAAGAGGGCAGTAATAAGCTGCAACAACTCCAGCAGTGGTACCAAGACAATGGCTACGATTTAGCGAAAGTGATCGG
TATTGATGAACCCAGTGCCGATGGGGTTGTGACCCTCGTCGTCGTTGAAGGGGTGATCGAAGATATTCAGGTCAATTTCA
TTAATGCTGACAATGAATCCGTTGATGGCAAGACCCGAGACTTTATCATCACGCGGGAAATGGAACTCAAGCCAGGAGAC
GTTTTCCGGCGGGATGTCGCCCAACGGGATCTCCAGCGGGTGTTTGGTCTGGGGTTATTTGAAGATGTCCAGTTAGATTT
CACCACAGGCACCGAAGATCCGACCCAGGCTGTCCTCAATCTAAATGTCATTGAAGGAAATACAGGCTCCATCGCTGCGG
GTGGGGGGATTAGCTCCGCCAGCGGTTTCTTTGGGAGTGTGAGCTACCAACAACAAAACCTGGGCGGCAATAACCAGCGT
CTGGCAGCCGAATTCCAATTAGGACAACGGGATGCTCTGTTCGACCTATCCTTTACGGATCCTTGGATTGCCGGCGATCC
TTACCGGACGTCCTATTCGGTCAATGCCTTCCGCCGTCGTTCTATCTCACTGATCTTTGATGGTGGGGAAAATGATGTTG
ATCTGCAAGACAGCGGCGATCGCCCCCGAATTAACCGGATTGGCGGTGGGGTGACCTTTAGCCGTCCTTTATCGAAGGAT
GTTTTTGGCCCCTCTGAATGGCGCGCCTCCCTCGGCTTCGACTACAATCGCGTCCGGATTACCAATGCCGATGGTGATAC
AGAGTTTATCGACGAAGCTGGGAACCAACTCAGTTTCTCTGACAATGGTATTGACGATATCTTTGCTCTGAGTCTAAATG
TGGTGCGCGATAAACGCACGAGCTTCGATGGGGCAACCCGCGGCTCCATTACCCGTTTCGGCACCGACCAGACCATTCCC
ATTGGTAGCGGCAGTATTCTCTTTAACCGACTCCGGGCCAGCCACAGTATCTATATGGATTCACCGATTAAACTCCCCAG
TTTTGGCAGTGAAGAGAAACCCCACACTTTGGCCTTCAATATCCAAGGGGGCGCAATTATCGGGGATTTACCCCCCTACG
AAGCCTTCTCTCTTGGGGGGAGTAACTCGGTTCGGGGCTTTGAAGAAGGAGACCTCGGCAGTGGCCGTAACTACATCCAA
GCGACAGCAGAATATCGCTTCCCCATTTTCTCGGCGGTGGGTGGCGCGCTATTTGCGGACTATGCCACAGACCTCGGTTC
CGGGGATGATGTGCCTGGAGATCCGGCGGGGACCCGTGGTAAGCCCGGTAATGGTTTCGGCTATGGTATCGGTGTGCGGG
TGAATTCTCCCCTGGGGCCAATCCGGGTGGATTATGGGCTTAACGACCAAGGGGACAGTCGTATTCACTTTGGTATTGGT
GAGCGTTTCTAA

Upstream 100 bases:

>100_bases
GGTACAATCCAGCAGAGTAAATTACTCATGTTGGCCGATTTACAGAAAAAGCACTTATAAATATAGTGCTGATAACTTTC
GTTTGATCTGGTGTTTGGAC

Downstream 100 bases:

>100_bases
GGTGTTATCGGTCTGATTTCGTGGGGGGCACCCCCCTTTTTTGTGATGGTTAAAACGTTAAAAACAACCGTTGAATGTTC
TGGGGTGGGTCTCCATTCGG

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MQKQQNLDYFSPQALALWAAIASLGVMSPAHAEPRSEGSHSDPLVPTATQVVVPALPVEDVAPTAAPASQTPAPQSENLA
QSSTQAVTSPVAQAQEAPQDSNLPQLYAQQQGNPNAQQANPNEPRVLVAEIQINGVGDNVELEQRIIRAIETQAGRPTTV
SQIRNDVNRVYATGLFANVVATPEDTPLGVRVTFDVVPNPVLTDIVVQALPLEGSQNITPPEVVDNIFSDRYGEIINLND
FQEGSNKLQQLQQWYQDNGYDLAKVIGIDEPSADGVVTLVVVEGVIEDIQVNFINADNESVDGKTRDFIITREMELKPGD
VFRRDVAQRDLQRVFGLGLFEDVQLDFTTGTEDPTQAVLNLNVIEGNTGSIAAGGGISSASGFFGSVSYQQQNLGGNNQR
LAAEFQLGQRDALFDLSFTDPWIAGDPYRTSYSVNAFRRRSISLIFDGGENDVDLQDSGDRPRINRIGGGVTFSRPLSKD
VFGPSEWRASLGFDYNRVRITNADGDTEFIDEAGNQLSFSDNGIDDIFALSLNVVRDKRTSFDGATRGSITRFGTDQTIP
IGSGSILFNRLRASHSIYMDSPIKLPSFGSEEKPHTLAFNIQGGAIIGDLPPYEAFSLGGSNSVRGFEEGDLGSGRNYIQ
ATAEYRFPIFSAVGGALFADYATDLGSGDDVPGDPAGTRGKPGNGFGYGIGVRVNSPLGPIRVDYGLNDQGDSRIHFGIG
ERF

Sequences:

>Translated_723_residues
MQKQQNLDYFSPQALALWAAIASLGVMSPAHAEPRSEGSHSDPLVPTATQVVVPALPVEDVAPTAAPASQTPAPQSENLA
QSSTQAVTSPVAQAQEAPQDSNLPQLYAQQQGNPNAQQANPNEPRVLVAEIQINGVGDNVELEQRIIRAIETQAGRPTTV
SQIRNDVNRVYATGLFANVVATPEDTPLGVRVTFDVVPNPVLTDIVVQALPLEGSQNITPPEVVDNIFSDRYGEIINLND
FQEGSNKLQQLQQWYQDNGYDLAKVIGIDEPSADGVVTLVVVEGVIEDIQVNFINADNESVDGKTRDFIITREMELKPGD
VFRRDVAQRDLQRVFGLGLFEDVQLDFTTGTEDPTQAVLNLNVIEGNTGSIAAGGGISSASGFFGSVSYQQQNLGGNNQR
LAAEFQLGQRDALFDLSFTDPWIAGDPYRTSYSVNAFRRRSISLIFDGGENDVDLQDSGDRPRINRIGGGVTFSRPLSKD
VFGPSEWRASLGFDYNRVRITNADGDTEFIDEAGNQLSFSDNGIDDIFALSLNVVRDKRTSFDGATRGSITRFGTDQTIP
IGSGSILFNRLRASHSIYMDSPIKLPSFGSEEKPHTLAFNIQGGAIIGDLPPYEAFSLGGSNSVRGFEEGDLGSGRNYIQ
ATAEYRFPIFSAVGGALFADYATDLGSGDDVPGDPAGTRGKPGNGFGYGIGVRVNSPLGPIRVDYGLNDQGDSRIHFGIG
ERF
>Mature_723_residues
MQKQQNLDYFSPQALALWAAIASLGVMSPAHAEPRSEGSHSDPLVPTATQVVVPALPVEDVAPTAAPASQTPAPQSENLA
QSSTQAVTSPVAQAQEAPQDSNLPQLYAQQQGNPNAQQANPNEPRVLVAEIQINGVGDNVELEQRIIRAIETQAGRPTTV
SQIRNDVNRVYATGLFANVVATPEDTPLGVRVTFDVVPNPVLTDIVVQALPLEGSQNITPPEVVDNIFSDRYGEIINLND
FQEGSNKLQQLQQWYQDNGYDLAKVIGIDEPSADGVVTLVVVEGVIEDIQVNFINADNESVDGKTRDFIITREMELKPGD
VFRRDVAQRDLQRVFGLGLFEDVQLDFTTGTEDPTQAVLNLNVIEGNTGSIAAGGGISSASGFFGSVSYQQQNLGGNNQR
LAAEFQLGQRDALFDLSFTDPWIAGDPYRTSYSVNAFRRRSISLIFDGGENDVDLQDSGDRPRINRIGGGVTFSRPLSKD
VFGPSEWRASLGFDYNRVRITNADGDTEFIDEAGNQLSFSDNGIDDIFALSLNVVRDKRTSFDGATRGSITRFGTDQTIP
IGSGSILFNRLRASHSIYMDSPIKLPSFGSEEKPHTLAFNIQGGAIIGDLPPYEAFSLGGSNSVRGFEEGDLGSGRNYIQ
ATAEYRFPIFSAVGGALFADYATDLGSGDDVPGDPAGTRGKPGNGFGYGIGVRVNSPLGPIRVDYGLNDQGDSRIHFGIG
ERF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 77858; Mature: 77858

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQQNLDYFSPQALALWAAIASLGVMSPAHAEPRSEGSHSDPLVPTATQVVVPALPVED
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHH
VAPTAAPASQTPAPQSENLAQSSTQAVTSPVAQAQEAPQDSNLPQLYAQQQGNPNAQQAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCC
PNEPRVLVAEIQINGVGDNVELEQRIIRAIETQAGRPTTVSQIRNDVNRVYATGLFANVV
CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEE
ATPEDTPLGVRVTFDVVPNPVLTDIVVQALPLEGSQNITPPEVVDNIFSDRYGEIINLND
ECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCC
FQEGSNKLQQLQQWYQDNGYDLAKVIGIDEPSADGVVTLVVVEGVIEDIQVNFINADNES
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHCCEEEEEECCCCCC
VDGKTRDFIITREMELKPGDVFRRDVAQRDLQRVFGLGLFEDVQLDFTTGTEDPTQAVLN
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEE
LNVIEGNTGSIAAGGGISSASGFFGSVSYQQQNLGGNNQRLAAEFQLGQRDALFDLSFTD
EEEEECCCCCEEECCCCCCCCCCCEECEEHHHCCCCCCCEEEEEECCCCCCCEEEECCCC
PWIAGDPYRTSYSVNAFRRRSISLIFDGGENDVDLQDSGDRPRINRIGGGVTFSRPLSKD
CCCCCCCCCCEEEHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCC
VFGPSEWRASLGFDYNRVRITNADGDTEFIDEAGNQLSFSDNGIDDIFALSLNVVRDKRT
CCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC
SFDGATRGSITRFGTDQTIPIGSGSILFNRLRASHSIYMDSPIKLPSFGSEEKPHTLAFN
CCCCCCCCCEEECCCCCEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEE
IQGGAIIGDLPPYEAFSLGGSNSVRGFEEGDLGSGRNYIQATAEYRFPIFSAVGGALFAD
ECCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
YATDLGSGDDVPGDPAGTRGKPGNGFGYGIGVRVNSPLGPIRVDYGLNDQGDSRIHFGIG
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCC
ERF
CCC
>Mature Secondary Structure
MQKQQNLDYFSPQALALWAAIASLGVMSPAHAEPRSEGSHSDPLVPTATQVVVPALPVED
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHH
VAPTAAPASQTPAPQSENLAQSSTQAVTSPVAQAQEAPQDSNLPQLYAQQQGNPNAQQAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCC
PNEPRVLVAEIQINGVGDNVELEQRIIRAIETQAGRPTTVSQIRNDVNRVYATGLFANVV
CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEE
ATPEDTPLGVRVTFDVVPNPVLTDIVVQALPLEGSQNITPPEVVDNIFSDRYGEIINLND
ECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCC
FQEGSNKLQQLQQWYQDNGYDLAKVIGIDEPSADGVVTLVVVEGVIEDIQVNFINADNES
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHCCEEEEEECCCCCC
VDGKTRDFIITREMELKPGDVFRRDVAQRDLQRVFGLGLFEDVQLDFTTGTEDPTQAVLN
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEE
LNVIEGNTGSIAAGGGISSASGFFGSVSYQQQNLGGNNQRLAAEFQLGQRDALFDLSFTD
EEEEECCCCCEEECCCCCCCCCCCEECEEHHHCCCCCCCEEEEEECCCCCCCEEEECCCC
PWIAGDPYRTSYSVNAFRRRSISLIFDGGENDVDLQDSGDRPRINRIGGGVTFSRPLSKD
CCCCCCCCCCEEEHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCC
VFGPSEWRASLGFDYNRVRITNADGDTEFIDEAGNQLSFSDNGIDDIFALSLNVVRDKRT
CCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC
SFDGATRGSITRFGTDQTIPIGSGSILFNRLRASHSIYMDSPIKLPSFGSEEKPHTLAFN
CCCCCCCCCEEECCCCCEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEE
IQGGAIIGDLPPYEAFSLGGSNSVRGFEEGDLGSGRNYIQATAEYRFPIFSAVGGALFAD
ECCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
YATDLGSGDDVPGDPAGTRGKPGNGFGYGIGVRVNSPLGPIRVDYGLNDQGDSRIHFGIG
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCC
ERF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]