Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is kefC [C]

Identifier: 170076911

GI number: 170076911

Start: 296736

End: 298775

Strand: Direct

Name: kefC [C]

Synonym: SYNPCC7002_A0283

Alternate gene names: 170076911

Gene position: 296736-298775 (Clockwise)

Preceding gene: 170076909

Following gene: 170076923

Centisome position: 9.86

GC content: 49.26

Gene sequence:

>2040_bases
ATGGTTGCCGAATCGATCCAATACATCACAGAAAATCCGATTTTTACGTTTATTCTGCTGCTGTTGGTCTCTCTGACCAT
TCCCCCTATTTTTGAACGGCTGAATTTACCTGGTTTGGTGGGCTTACTCTTTGCAGGGATTATCCTTGGTGAAAACGCCC
TCGGTCTCCTCGACTCAGAGAGTGAAACCATGGTTTTGTTCTCGGAAGTGGGCAAAATTTACCTGATGTTTGTGGCCGGA
TTGGAAATTAATTTGGCGGAGTTTCGGAAAACCCAAGATCGCTCCATTGGCTTTGGTTTTCTGACATTTATTGTGCCGTT
AACGATGGGAACGGTGGTCGGCCTAAGTTTCGATTTTGGTTGGAATGCGGCAATTCTTATTGGATCTTTATTGGCTTCCC
ATACGTTGCTGGGTTACCCAATTATTAACCGTTTGGGGATTCTCAATAATGAGAGTGTAACGGTCACGATTGGCGCGACG
ATTTTTACGGACATTGCGGCTCTTTTGGTGCTGGCGATCTGTGTGTCGATTCACCAGGGCGATTTTTCTACGGCTTCTTT
GGTCTTGCAACTGGCGTTATTGGTGGGCTACGGAGCTTTGGTACTCTTCGGTCTGTCCTGGCTTGGTCGAGAATTTTTCC
AGCGCAATGGGGATGAAGAGGGCAATCAATTTCTATTTATTTTGCTGGCTGTCTTTCTCGCGTCAGTGGGGGCCCAGGTG
ATCAATGTGGATAAAATTGTGGGGGCTTTTTTGGCGGGTTTAGCGGTCAATGATGTGGTCGGCAAAAGCCCGGTAGAGGA
AAAAATCGAATTTGTCGGCAGTACGCTATTTATTCCATTCTTCTTTGTGGGGATGGGGTTATTGCTCGATATTCCGGCAT
TTATTAATAATTTGCTCTATGAGTTTCCCCTCACGTTTTCGATTGTGGGTGGGTTGTTGTTGTCTAAATTTATCGCGGCG
GCGATCGCCAAACAGATTTATCGTTATAGCTGGGCCGAAACCCTCACGATGTGGTCGTTGTCGATCCCCCAGGTGGCGGC
AACCCTGGCGGCGGCCTTGGTTGGTTTCCGGGTGGGACTGATCAGCGAATCAGTATTTAATGCGGTGATTGTGCTGATGC
TAGTCACTTCGATGCTGGGGCCGGTGTTAACCCGTCGTTTTGGTCGTTTATTACCCAGTAGTGGCAAGGATATTGCCCTG
ACAACGGTTAAGGTGTCGCCATCGACGGATCGGTTCAAAATTGTTGTACCCATTGCTAATCCCAGCACCAAGGATTATTT
ACTCGAAGCGGCAGGGCTTTTAACCCGCATTCGTCAAGGGGTTGTGATGCCTGTGTCGATTGTGACGGGCCACGCCCACA
TGGATGATCCGGCAGTGATGACGGGGATCGACCGGAGTCAAAGCTTACTCCAAGAGGCGATCGCCCAGGGGGAGCAACTG
CAAATTACAATGCAACCAAAAATTCGCATCGATGACGATGTGGCCGCCGGGATCAGTCGCGTGGCCCGGGAAGAAAATGC
CAACTTAATTTTGATGGGCTGGGGAAAAACCGAGGGTCTCAAAGCAAGGCTCCTGGGGACTTTAATTCACAATGTCTGTT
GGTCTGCCCATTGCCCGGTGGCGGTGGTGCGTCTGCTGGATGACCCGAAAAATTTGCGGCGGATTATGGTGCCCTTCAAG
GGAATTTCGGCCCAAAATTTACAGATAGTTCAATTTGCAGAACTTTTGGCGATCGCCAACCAAGCCGAAGTCACCGTCTT
CCATGTGTGCGAAACCTGGATGACCAAAGACCAACGCAATTTGCTCAAAGCCGACCTAGAAAATGCCCTGCAAAATGCCG
GAATCACCACCAAAATGCAGATTCGGATCATCCGTTACCACGACGTGGCCAAGGCAATTCTCCATGACGCCAAAGACTTC
GATCTTGTCATTCTGCACTCTACCCGTTACCGTACCGCCGGAGGCCTAGCTGTGGGCGATGTCACCACAAAAATTTCGAG
CCAAATCCAAACATCCGTCGTCATTTTCAACGAACTCTAA

Upstream 100 bases:

>100_bases
AAGGGCCAAAATTCCCTGTTTTTGCCATAAAATCGACAATTTATTTTCGTTATAAACTTCTTCCGCTACACTGGGAGGCT
AGCCTTTTTCTCGGACTGCC

Downstream 100 bases:

>100_bases
CCCTCATTCGCCTAACAAAAGTAGCGTTTTTTAAAGTTCAACCTAAAGCCAGTGCTTTGGATAAGGACGTCCCGGCACCA
CACGACTAAAAATTACCGTC

Product: Sodium/hydrogen exchanger family protein

Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]

Alternate protein names: MjNapA [H]

Number of amino acids: Translated: 679; Mature: 679

Protein sequence:

>679_residues
MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSESETMVLFSEVGKIYLMFVAG
LEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFGWNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGAT
IFTDIAALLVLAICVSIHQGDFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV
INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLYEFPLTFSIVGGLLLSKFIAA
AIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGLISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIAL
TTVKVSPSTDRFKIVVPIANPSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL
QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPVAVVRLLDDPKNLRRIMVPFK
GISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRNLLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDF
DLVILHSTRYRTAGGLAVGDVTTKISSQIQTSVVIFNEL

Sequences:

>Translated_679_residues
MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSESETMVLFSEVGKIYLMFVAG
LEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFGWNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGAT
IFTDIAALLVLAICVSIHQGDFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV
INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLYEFPLTFSIVGGLLLSKFIAA
AIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGLISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIAL
TTVKVSPSTDRFKIVVPIANPSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL
QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPVAVVRLLDDPKNLRRIMVPFK
GISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRNLLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDF
DLVILHSTRYRTAGGLAVGDVTTKISSQIQTSVVIFNEL
>Mature_679_residues
MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSESETMVLFSEVGKIYLMFVAG
LEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFGWNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGAT
IFTDIAALLVLAICVSIHQGDFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV
INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLYEFPLTFSIVGGLLLSKFIAA
AIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGLISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIAL
TTVKVSPSTDRFKIVVPIANPSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL
QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPVAVVRLLDDPKNLRRIMVPFK
GISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRNLLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDF
DLVILHSTRYRTAGGLAVGDVTTKISSQIQTSVVIFNEL

Specific function: This is probably a Na(+)/H(+) antiporter [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]

Homologues:

Organism=Escherichia coli, GI1786232, Length=285, Percent_Identity=28.7719298245614, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789749, Length=282, Percent_Identity=25.531914893617, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322367, Length=424, Percent_Identity=22.4056603773585, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153 [H]

Pfam domain/function: PF00999 Na_H_Exchanger [H]

EC number: NA

Molecular weight: Translated: 73858; Mature: 73858

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00289 PENTAXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSE
CCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
SETMVLFSEVGKIYLMFVAGLEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFG
CCCEEEHHHHHHHHHHHHHCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCC
WNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGATIFTDIAALLVLAICVSIHQG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC
DFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHH
INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFPLTFSIVGGLLLSKFIAAAIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIALTTVKVSPSTDRFKIVVPIAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECC
PSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL
CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHEECCCHHHHHHHHHHCCCCEE
QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPV
EEEECCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH
AVVRLLDDPKNLRRIMVPFKGISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRN
HHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHH
LLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDFDLVILHSTRYRTAGGLAVGD
HHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECH
VTTKISSQIQTSVVIFNEL
HHHHHHHHHHEEEEEEECC
>Mature Secondary Structure
MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSE
CCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
SETMVLFSEVGKIYLMFVAGLEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFG
CCCEEEHHHHHHHHHHHHHCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCC
WNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGATIFTDIAALLVLAICVSIHQG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC
DFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHH
INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFPLTFSIVGGLLLSKFIAAAIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIALTTVKVSPSTDRFKIVVPIAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECC
PSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL
CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHEECCCHHHHHHHHHHCCCCEE
QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPV
EEEECCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH
AVVRLLDDPKNLRRIMVPFKGISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRN
HHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHH
LLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDFDLVILHSTRYRTAGGLAVGD
HHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECH
VTTKISSQIQTSVVIFNEL
HHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]